| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is 85059520
Identifier: 85059520
GI number: 85059520
Start: 2624695
End: 2625375
Strand: Reverse
Name: 85059520
Synonym: SG1542
Alternate gene names: NA
Gene position: 2625375-2624695 (Counterclockwise)
Preceding gene: 85059521
Following gene: 85059511
Centisome position: 62.94
GC content: 49.19
Gene sequence:
>681_bases ATGAGTTCGCAAGAGCTAACATTTAGTCAGGTAGTGAAAAAAAGGTACTCGGCAAGAGCCTTTCTTCCATCTCCTATCCC CAGCGATGTCCTCAAAGACATTTTGCTTAAAGCGCAATGTGCACCATCCAACTGCAATACTCAACCCTGGTCCCTGCATA TCGTCGCGGGAGATAAGCTTCGTGAATTAAGCCATGCGCTGACGGCAGATCTGAAAGCAGGAAACTACAGCCTTGATTTT ACGTTTGATAAAGAAGCCTATCCCGAGCCATTCAGACAAAGTGCTTTGGAGCAGGTGCGCTCGTACTATCAGGCATTGGG CGTTGCGCGGGGGGACAATTTAAGTCGCTCAGAAGTGGTAGAACGTAACGTGAAATTTTTCGGAGCGCCTCATGTTGCTC TGTTGTTCATCCCTGTTGTAGGGGACAACGTTCGCGTTGCCTTGGATGCGGGTATGTATGCGCAGGTATTCCTGCTTTCT CTGGCAGCTCGCGGTTACGCAGGCGTTCCACAGGCAGTGCTGAGTTATTTTGCCCAAACGGTGCGTCGGATATTAAATGT ACCGGAGGATTTCAGGCTGCTATACGGTATTTCTTTTGGGATCCCAGATAAAACGCATCCCTCCCTGAGTTACAGGGAAG GGCGGGTTTCTATAGACGAAAGTGTCGTCTGGCATCAATAA
Upstream 100 bases:
>100_bases TAATCTGGATCAGGAAATGAAAACGATGAGCCTGATGTGACAGGATGGATCTGGAAAGAGTGAATCATTCACTTCAAATT ACTTTCAGGCGGAGAAGCAA
Downstream 100 bases:
>100_bases CAAAGCTTTATTTTTTTAGCTGAACGGTCAGTGCCATCAAGGCGCTGGCTGCCGTAAACAACGCAATTATCCAGCCCATC ATCCATGGTGTGCCATCACT
Product: putative nitroreductase
Products: NA
Alternate protein names: Nitroreductase Family Protein; Oxidoreductase; NfnB Protein; P-Nitrobenzoate Reductase; NADH Dehydrogenase; Oxidoreductase Protein; Nitrobenzene Nitroreductase; Nitroreductase Family; Nitrobenzoate Nitroreductase; Nitrobenzoate Reductase
Number of amino acids: Translated: 226; Mature: 225
Protein sequence:
>226_residues MSSQELTFSQVVKKRYSARAFLPSPIPSDVLKDILLKAQCAPSNCNTQPWSLHIVAGDKLRELSHALTADLKAGNYSLDF TFDKEAYPEPFRQSALEQVRSYYQALGVARGDNLSRSEVVERNVKFFGAPHVALLFIPVVGDNVRVALDAGMYAQVFLLS LAARGYAGVPQAVLSYFAQTVRRILNVPEDFRLLYGISFGIPDKTHPSLSYREGRVSIDESVVWHQ
Sequences:
>Translated_226_residues MSSQELTFSQVVKKRYSARAFLPSPIPSDVLKDILLKAQCAPSNCNTQPWSLHIVAGDKLRELSHALTADLKAGNYSLDF TFDKEAYPEPFRQSALEQVRSYYQALGVARGDNLSRSEVVERNVKFFGAPHVALLFIPVVGDNVRVALDAGMYAQVFLLS LAARGYAGVPQAVLSYFAQTVRRILNVPEDFRLLYGISFGIPDKTHPSLSYREGRVSIDESVVWHQ >Mature_225_residues SSQELTFSQVVKKRYSARAFLPSPIPSDVLKDILLKAQCAPSNCNTQPWSLHIVAGDKLRELSHALTADLKAGNYSLDFT FDKEAYPEPFRQSALEQVRSYYQALGVARGDNLSRSEVVERNVKFFGAPHVALLFIPVVGDNVRVALDAGMYAQVFLLSL AARGYAGVPQAVLSYFAQTVRRILNVPEDFRLLYGISFGIPDKTHPSLSYREGRVSIDESVVWHQ
Specific function: Unknown
COG id: COG0778
COG function: function code C; Nitroreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25181; Mature: 25050
Theoretical pI: Translated: 8.62; Mature: 8.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSQELTFSQVVKKRYSARAFLPSPIPSDVLKDILLKAQCAPSNCNTQPWSLHIVAGDKL CCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEECHHH RELSHALTADLKAGNYSLDFTFDKEAYPEPFRQSALEQVRSYYQALGVARGDNLSRSEVV HHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH ERNVKFFGAPHVALLFIPVVGDNVRVALDAGMYAQVFLLSLAARGYAGVPQAVLSYFAQT HHHHHHCCCCCEEEEEEEECCCCEEEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHH VRRILNVPEDFRLLYGISFGIPDKTHPSLSYREGRVSIDESVVWHQ HHHHHCCCHHHHEEHEEEECCCCCCCCCCCCCCCCEECCCCCCCCC >Mature Secondary Structure SSQELTFSQVVKKRYSARAFLPSPIPSDVLKDILLKAQCAPSNCNTQPWSLHIVAGDKL CCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEECHHH RELSHALTADLKAGNYSLDFTFDKEAYPEPFRQSALEQVRSYYQALGVARGDNLSRSEVV HHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH ERNVKFFGAPHVALLFIPVVGDNVRVALDAGMYAQVFLLSLAARGYAGVPQAVLSYFAQT HHHHHHCCCCCEEEEEEEECCCCEEEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHH VRRILNVPEDFRLLYGISFGIPDKTHPSLSYREGRVSIDESVVWHQ HHHHHCCCHHHHEEHEEEECCCCCCCCCCCCCCCCEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA