| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is 85059511
Identifier: 85059511
GI number: 85059511
Start: 2596018
End: 2596830
Strand: Reverse
Name: 85059511
Synonym: SG1533
Alternate gene names: NA
Gene position: 2596830-2596018 (Counterclockwise)
Preceding gene: 85059520
Following gene: 85059510
Centisome position: 62.26
GC content: 48.95
Gene sequence:
>813_bases ATGATCGATGCGCTGGCACGCAGCGAGCATGATGTATTAGCACCCTTTCACAAATACCGACAAAATGCCTTGCTGGATGC AACCATCGCACTCATCAGTGGCGCATCACTGACGCTGACCAGCATCGGTCGTTATCTGCCCGGTGCGGTTCAGGTCAAAA ATAAAATAAAACGCGTTGATCGCCTGCTGGGTAATAAATCACTACATCAGGATATTCCTCTGATTTTTAAAAGTATTATC TCAATGCTGACGAGTCAGTTGTCTCTGTGTGTTATTGCCGTTGACTGGAACGGCTACCCGTCTCAGGAATATCACGTTCT TCGAGCCAGTCTCCTGTGCGACGGGCGCTCAATCCCCTTGTTAAGCTGGATAGTCCCGTCAGAAAAACAACAGAACTCTC AGCTACAAAAGGCCTTCCTCAATGCTCTTGCCGAGGCCGTGAACCAGCAGGCCAGAGTCATCATTGTTACCGACGCAGGC TTTCAGAACTCCTGGTTCAGACATATCAAATCTCTCGGGTGGGACTTTATTGGCCGCATAAGAGGTACGGTAAAATTCAG GCTGCAAAAAACAGGCGAGTGCTGGTACCACGTGAGTGATATCAAGGCAGAAAGGCATCCGGCAATCAAAGCCAGTGCGA GGCCGGTATATCTTGGGGCTGGAACTCTGGGATGCACAGAATATGCTCGTTGCGATGGTCATTTTTATCTTCACAAGAAG CCATCTTGCGGACGTAAAAATAAGCATTCCCGATGCAGTATCTATCGTAAATCACAGGTACGAGATGCCTGCAGGGCGGC AAAAGAGCCATGA
Upstream 100 bases:
>100_bases TGGGCATGAAACATGCAGCGCCAAAACGTCATTATCTTTCTCGGGAGGCGGGATGCTGGATCATTTGGGCGGGAAGGAGA GCGAGAGTGAACGGCGCAAG
Downstream 100 bases:
>100_bases CTTATCTTCAGTAGCACAGATGACTTCAAACAACGTGAACTTATGAAGTTATACAGCCGCCGTATGCAGATAGAGCAGAA CTTCCGGGATGAGAAAAGTG
Product: putative transposase
Products: NA
Alternate protein names: Transposase; Transposase For IS; ISxac1 Transposase; IS10 Orf; IS4 Family Transposase; ISCro2 Transposase; ISSfl3 ORF; Transposase IS
Number of amino acids: Translated: 270; Mature: 270
Protein sequence:
>270_residues MIDALARSEHDVLAPFHKYRQNALLDATIALISGASLTLTSIGRYLPGAVQVKNKIKRVDRLLGNKSLHQDIPLIFKSII SMLTSQLSLCVIAVDWNGYPSQEYHVLRASLLCDGRSIPLLSWIVPSEKQQNSQLQKAFLNALAEAVNQQARVIIVTDAG FQNSWFRHIKSLGWDFIGRIRGTVKFRLQKTGECWYHVSDIKAERHPAIKASARPVYLGAGTLGCTEYARCDGHFYLHKK PSCGRKNKHSRCSIYRKSQVRDACRAAKEP
Sequences:
>Translated_270_residues MIDALARSEHDVLAPFHKYRQNALLDATIALISGASLTLTSIGRYLPGAVQVKNKIKRVDRLLGNKSLHQDIPLIFKSII SMLTSQLSLCVIAVDWNGYPSQEYHVLRASLLCDGRSIPLLSWIVPSEKQQNSQLQKAFLNALAEAVNQQARVIIVTDAG FQNSWFRHIKSLGWDFIGRIRGTVKFRLQKTGECWYHVSDIKAERHPAIKASARPVYLGAGTLGCTEYARCDGHFYLHKK PSCGRKNKHSRCSIYRKSQVRDACRAAKEP >Mature_270_residues MIDALARSEHDVLAPFHKYRQNALLDATIALISGASLTLTSIGRYLPGAVQVKNKIKRVDRLLGNKSLHQDIPLIFKSII SMLTSQLSLCVIAVDWNGYPSQEYHVLRASLLCDGRSIPLLSWIVPSEKQQNSQLQKAFLNALAEAVNQQARVIIVTDAG FQNSWFRHIKSLGWDFIGRIRGTVKFRLQKTGECWYHVSDIKAERHPAIKASARPVYLGAGTLGCTEYARCDGHFYLHKK PSCGRKNKHSRCSIYRKSQVRDACRAAKEP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30340; Mature: 30340
Theoretical pI: Translated: 10.30; Mature: 10.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDALARSEHDVLAPFHKYRQNALLDATIALISGASLTLTSIGRYLPGAVQVKNKIKRVD CCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHH RLLGNKSLHQDIPLIFKSIISMLTSQLSLCVIAVDWNGYPSQEYHVLRASLLCDGRSIPL HHHCCCCHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCE LSWIVPSEKQQNSQLQKAFLNALAEAVNQQARVIIVTDAGFQNSWFRHIKSLGWDFIGRI EEEECCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHCHHHHHHH RGTVKFRLQKTGECWYHVSDIKAERHPAIKASARPVYLGAGTLGCTEYARCDGHFYLHKK HCEEEEEEEECCCEEEEHHHHCCCCCCCCCCCCCEEEEECCCCCCHHHHHCCCEEEEECC PSCGRKNKHSRCSIYRKSQVRDACRAAKEP CCCCCCCCCCHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MIDALARSEHDVLAPFHKYRQNALLDATIALISGASLTLTSIGRYLPGAVQVKNKIKRVD CCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHH RLLGNKSLHQDIPLIFKSIISMLTSQLSLCVIAVDWNGYPSQEYHVLRASLLCDGRSIPL HHHCCCCHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCE LSWIVPSEKQQNSQLQKAFLNALAEAVNQQARVIIVTDAGFQNSWFRHIKSLGWDFIGRI EEEECCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHCHHHHHHH RGTVKFRLQKTGECWYHVSDIKAERHPAIKASARPVYLGAGTLGCTEYARCDGHFYLHKK HCEEEEEEEECCCEEEEHHHHCCCCCCCCCCCCCEEEEECCCCCCHHHHHCCCEEEEECC PSCGRKNKHSRCSIYRKSQVRDACRAAKEP CCCCCCCCCCHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA