| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is yaiL [H]
Identifier: 85059521
GI number: 85059521
Start: 2628022
End: 2628561
Strand: Reverse
Name: yaiL [H]
Synonym: SG1543
Alternate gene names: 85059521
Gene position: 2628561-2628022 (Counterclockwise)
Preceding gene: 85059524
Following gene: 85059520
Centisome position: 63.02
GC content: 45.56
Gene sequence:
>540_bases ATGACAAAACTCACCTTGCAAGAGCAGATGCTAAAAGCAGGATTAGTGTCCAGCCAAAAAATGGCTAAAGTGCAGAGAAC GGCTAAAAAATCACGCGTTCAGGCTCGTGAGGCCAGAGCGGCCGTGGAGGAAAATAAAAAAGCGCAACTTGAGCGTGATA AACAGCTGAGCGAACAACACAAACAAGTGACGTTATCGAAGGAATATAAAGCACAGGTTAAGCAGCTCATTGAAATGAAC ATAATCCACATCGCCAAAGGCGATATTGGTTTTAACTTCACCGATAACAATGTTATCAAAAAACTCGATGTTGATAAGAT AACCCAAGCTCAGTTGATAAATGGTCGTCTCGCCATCGCTCGGCTGGCGGTTGATAACGCGGGTGAGTGTCTATATGCGA TTATCCCCGCGAGCGTCGCCGATAAAATTGCCCAGCGAGATGCAGACTGTATTGTCTTGCACAGTGTGCTGAGTCAGGAA GAGCAGGATGAAGACGATCCCTACGCTGATTTTAAAGTGCCCGATGATTTAATGTGGTGA
Upstream 100 bases:
>100_bases GCAACTTTAAGCCACGCGGTGATGAGGTCCTGTAACCTGGCACAGTCGTAAAAATTACAGGTATAATCCCCTAAATGACT TAACGGGTATAGAAACGACA
Downstream 100 bases:
>100_bases TCTACATTTTGCACAGGCGTAAAGATGAAAAGCCCTTCAGGGCTTTTCGTACTTTTTGCAGCCCGGTCATGGGAATGTGA GTCCATCGGGGATAGAGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 179; Mature: 178
Protein sequence:
>179_residues MTKLTLQEQMLKAGLVSSQKMAKVQRTAKKSRVQAREARAAVEENKKAQLERDKQLSEQHKQVTLSKEYKAQVKQLIEMN IIHIAKGDIGFNFTDNNVIKKLDVDKITQAQLINGRLAIARLAVDNAGECLYAIIPASVADKIAQRDADCIVLHSVLSQE EQDEDDPYADFKVPDDLMW
Sequences:
>Translated_179_residues MTKLTLQEQMLKAGLVSSQKMAKVQRTAKKSRVQAREARAAVEENKKAQLERDKQLSEQHKQVTLSKEYKAQVKQLIEMN IIHIAKGDIGFNFTDNNVIKKLDVDKITQAQLINGRLAIARLAVDNAGECLYAIIPASVADKIAQRDADCIVLHSVLSQE EQDEDDPYADFKVPDDLMW >Mature_178_residues TKLTLQEQMLKAGLVSSQKMAKVQRTAKKSRVQAREARAAVEENKKAQLERDKQLSEQHKQVTLSKEYKAQVKQLIEMNI IHIAKGDIGFNFTDNNVIKKLDVDKITQAQLINGRLAIARLAVDNAGECLYAIIPASVADKIAQRDADCIVLHSVLSQEE QDEDDPYADFKVPDDLMW
Specific function: Unknown
COG id: COG3122
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87081724, Length=179, Percent_Identity=84.9162011173184, Blast_Score=303, Evalue=3e-84,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018636 [H]
Pfam domain/function: PF09831 DUF2058 [H]
EC number: NA
Molecular weight: Translated: 20161; Mature: 20030
Theoretical pI: Translated: 7.51; Mature: 7.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKLTLQEQMLKAGLVSSQKMAKVQRTAKKSRVQAREARAAVEENKKAQLERDKQLSEQH CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KQVTLSKEYKAQVKQLIEMNIIHIAKGDIGFNFTDNNVIKKLDVDKITQAQLINGRLAIA HHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCHHHHCCHHHHHHHHHHCCHHHHH RLAVDNAGECLYAIIPASVADKIAQRDADCIVLHSVLSQEEQDEDDPYADFKVPDDLMW HHHHCCCCCEEEEECCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHCCC >Mature Secondary Structure TKLTLQEQMLKAGLVSSQKMAKVQRTAKKSRVQAREARAAVEENKKAQLERDKQLSEQH CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KQVTLSKEYKAQVKQLIEMNIIHIAKGDIGFNFTDNNVIKKLDVDKITQAQLINGRLAIA HHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCHHHHCCHHHHHHHHHHCCHHHHH RLAVDNAGECLYAIIPASVADKIAQRDADCIVLHSVLSQEEQDEDDPYADFKVPDDLMW HHHHCCCCCEEEEECCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]