| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is 85059510
Identifier: 85059510
GI number: 85059510
Start: 2594945
End: 2595589
Strand: Reverse
Name: 85059510
Synonym: SG1532
Alternate gene names: NA
Gene position: 2595589-2594945 (Counterclockwise)
Preceding gene: 85059511
Following gene: 85059508
Centisome position: 62.23
GC content: 59.84
Gene sequence:
>645_bases GTGCTGGGCTTTCCCTTCATCCGGTTTTATGCGGGCACCCCGCTTGTCACCAAAAATAATATCGCCATCGGTATCCTGTG CATCATCGATTATCAGCCGTGCACTTTGAGCCGTCATGAGCGGGATCGGCTGGAAGCCCTCGGCGCCATGGTCACCGTGT TCATGCAGGAAACTCACCGGCTGGGGCTTATCGATCCCGTGACCCTGTTACCCAACCGGCAGCGGCTGTATGATGAACTG GCGGAGCTGGATGAGCGCGAGCCGCGCTATGGGCTGGCGCTGGTGGAAACCACCGACGTCGTCCGTCTTTATGATACAGC GAAAGCGTTCGGGAGCGCGGCGGTAGAGGCGCGCATTCTGGCGGTGGCGCCGCGCATGCGGGAGGCTCTGAGATCGCGTT ATCATCTCTACAGCGTGGCGTTCGGCCGGTTTGCCATTCTTTATGACGAGGCGGACACCGCCGATCTTCTGAACAACATC CGCCGTTTGCGCAAGGAGCTGAACATGGGTTTAACCAGCTTCGATACGGCGATCCGCCGCCAGTCGCAGCAAATATTGCG CGAGTGCATGAGCGCGCTACATGACGCCGTGAGCAGGGCGTCATGCGCTATCAGCCCGACAACGACCTGTCGCAACAGCG GCTGA
Upstream 100 bases:
>100_bases AGTGAACTGTGCTAAGCACCGTTCTTAATCGCCTCGCCAAAACCTACCGAAATATGGTGTTGGTTTATTAGCGCTGATTT ATGGGGATCCCTCAGCGCTG
Downstream 100 bases:
>100_bases CGACCATTGTGCAGGACTTGACCAAGCGCATCTCGTCGGCCGCAGGATTTGCCATTTATTATCAACTGAAACTGAATCTG CGTACAGGCATGATTGAGAG
Product: hypothetical protein
Products: NA
Alternate protein names: Diguanylate Cyclase/Phosphodiesterase; Signal Transduction Protein; GAF Domain/GGDEF Domain/EAL Domain-Containing Protein; Cyclic Diguanylate Phosphodiesterase Domain Protein; GAF Sensor-Containing Diguanylate Cyclase/Phosphodiesterase; Diguanylate Cyclase/Phosphodiesterase Fragment; Signaling Protein YkoW; Signaling Protein; Sensor Protein; GGDEF Family Protein; EAL Domain-Containing Protein
Number of amino acids: Translated: 214; Mature: 214
Protein sequence:
>214_residues MLGFPFIRFYAGTPLVTKNNIAIGILCIIDYQPCTLSRHERDRLEALGAMVTVFMQETHRLGLIDPVTLLPNRQRLYDEL AELDEREPRYGLALVETTDVVRLYDTAKAFGSAAVEARILAVAPRMREALRSRYHLYSVAFGRFAILYDEADTADLLNNI RRLRKELNMGLTSFDTAIRRQSQQILRECMSALHDAVSRASCAISPTTTCRNSG
Sequences:
>Translated_214_residues MLGFPFIRFYAGTPLVTKNNIAIGILCIIDYQPCTLSRHERDRLEALGAMVTVFMQETHRLGLIDPVTLLPNRQRLYDEL AELDEREPRYGLALVETTDVVRLYDTAKAFGSAAVEARILAVAPRMREALRSRYHLYSVAFGRFAILYDEADTADLLNNI RRLRKELNMGLTSFDTAIRRQSQQILRECMSALHDAVSRASCAISPTTTCRNSG >Mature_214_residues MLGFPFIRFYAGTPLVTKNNIAIGILCIIDYQPCTLSRHERDRLEALGAMVTVFMQETHRLGLIDPVTLLPNRQRLYDEL AELDEREPRYGLALVETTDVVRLYDTAKAFGSAAVEARILAVAPRMREALRSRYHLYSVAFGRFAILYDEADTADLLNNI RRLRKELNMGLTSFDTAIRRQSQQILRECMSALHDAVSRASCAISPTTTCRNSG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24186; Mature: 24186
Theoretical pI: Translated: 8.20; Mature: 8.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGFPFIRFYAGTPLVTKNNIAIGILCIIDYQPCTLSRHERDRLEALGAMVTVFMQETHR CCCCCHHHHHCCCCEEEECCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHC LGLIDPVTLLPNRQRLYDELAELDEREPRYGLALVETTDVVRLYDTAKAFGSAAVEARIL CCCCCCHHHCCCHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHH AVAPRMREALRSRYHLYSVAFGRFAILYDEADTADLLNNIRRLRKELNMGLTSFDTAIRR HHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHH QSQQILRECMSALHDAVSRASCAISPTTTCRNSG HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MLGFPFIRFYAGTPLVTKNNIAIGILCIIDYQPCTLSRHERDRLEALGAMVTVFMQETHR CCCCCHHHHHCCCCEEEECCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHC LGLIDPVTLLPNRQRLYDELAELDEREPRYGLALVETTDVVRLYDTAKAFGSAAVEARIL CCCCCCHHHCCCHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHH AVAPRMREALRSRYHLYSVAFGRFAILYDEADTADLLNNIRRLRKELNMGLTSFDTAIRR HHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHH QSQQILRECMSALHDAVSRASCAISPTTTCRNSG HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA