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The map label for this gene is ynfB [C]

Identifier: 85059446

GI number: 85059446

Start: 2456168

End: 2456506

Strand: Reverse

Name: ynfB [C]

Synonym: SG1468

Alternate gene names: 85059446

Gene position: 2456506-2456168 (Counterclockwise)

Preceding gene: 85059448

Following gene: 85059445

Centisome position: 58.89

GC content: 58.41

Gene sequence:

>339_bases
ATGAACACAATTCCGACCCGATGTTTGCTCGGCGGATTGCTGGCACTGAGCCTGCTGGCGTATGCCGGCGAAGGGGACGG
CACCCAGCATATCGTTATCGATTCGGGCGATACCGCACGGTCGTGGGAAGCGGCGCGGCAGAGTCAGGAACAATGGAATG
CCACCCATGGGCTGCGCAACAAAGTCAACACGCGCGTAGAGAAAGATTTCGACCGCTATGATCAGGCCGTAGATTTGCAG
GAAAAATGCAACAGTAGCCAGAATGTCAACGCGTACTGGGAGCCCAACACCTCCCGTTGTCTGGATCGCCGTACGGGACG
CTCGCTGCTGGCGCCCTGA

Upstream 100 bases:

>100_bases
ACCCTGTTGTTGATGGTTCGTGGGGTATTGAGACGATACCATCGTTAATCTCATACATTATTAGCGCGTTATTACGCGCA
CAGCTTGAAAGGAACATGGC

Downstream 100 bases:

>100_bases
GTATGACGAATTTCTTAAAAGCTTTACGCTGCTACGCTTATAACGCCACTTCATTATCATATAAGGATGACAGGATGAAG
AAGTCAATGTTGTTACCCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 112; Mature: 112

Protein sequence:

>112_residues
MNTIPTRCLLGGLLALSLLAYAGEGDGTQHIVIDSGDTARSWEAARQSQEQWNATHGLRNKVNTRVEKDFDRYDQAVDLQ
EKCNSSQNVNAYWEPNTSRCLDRRTGRSLLAP

Sequences:

>Translated_112_residues
MNTIPTRCLLGGLLALSLLAYAGEGDGTQHIVIDSGDTARSWEAARQSQEQWNATHGLRNKVNTRVEKDFDRYDQAVDLQ
EKCNSSQNVNAYWEPNTSRCLDRRTGRSLLAP
>Mature_112_residues
MNTIPTRCLLGGLLALSLLAYAGEGDGTQHIVIDSGDTARSWEAARQSQEQWNATHGLRNKVNTRVEKDFDRYDQAVDLQ
EKCNSSQNVNAYWEPNTSRCLDRRTGRSLLAP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0482 family

Homologues:

Organism=Escherichia coli, GI1787866, Length=101, Percent_Identity=53.4653465346535, Blast_Score=104, Evalue=2e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1468_SODGM (Q2NSY2)

Other databases:

- EMBL:   AP008232
- RefSeq:   YP_455148.1
- STRING:   Q2NSY2
- GeneID:   3866893
- GenomeReviews:   AP008232_GR
- KEGG:   sgl:SG1468
- NMPDR:   fig|343509.6.peg.3023
- eggNOG:   NOG12249
- HOGENOM:   HBG636731
- OMA:   ANVNAYW
- PhylomeDB:   Q2NSY2
- ProtClustDB:   PRK13659
- BioCyc:   SGLO343509:SG1468-MONOMER
- HAMAP:   MF_01581
- InterPro:   IPR009700
- ProDom:   PD073251

Pfam domain/function: PF06932 DUF1283

EC number: NA

Molecular weight: Translated: 12537; Mature: 12537

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTIPTRCLLGGLLALSLLAYAGEGDGTQHIVIDSGDTARSWEAARQSQEQWNATHGLRN
CCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
KVNTRVEKDFDRYDQAVDLQEKCNSSQNVNAYWEPNTSRCLDRRTGRSLLAP
HHHHHHHHHHHHHHHHCCHHHHCCCCCCCCEEECCCHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MNTIPTRCLLGGLLALSLLAYAGEGDGTQHIVIDSGDTARSWEAARQSQEQWNATHGLRN
CCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
KVNTRVEKDFDRYDQAVDLQEKCNSSQNVNAYWEPNTSRCLDRRTGRSLLAP
HHHHHHHHHHHHHHHHCCHHHHCCCCCCCCEEECCCHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA