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The map label for this gene is ynfD [H]

Identifier: 85059445

GI number: 85059445

Start: 2455839

End: 2456081

Strand: Reverse

Name: ynfD [H]

Synonym: SG1467

Alternate gene names: 85059445

Gene position: 2456081-2455839 (Counterclockwise)

Preceding gene: 85059446

Following gene: 85059442

Centisome position: 58.88

GC content: 57.2

Gene sequence:

>243_bases
ATGTTGTTACCCCTTGCGCTGGCCCTTCTTGTGCCTCTCGGCGCACAGGCCGCGTGCGAAGATGTGAAAGCGGACATAGC
GAGGAAAATCGTTGCCAACGGCGTACCCGAATCCGGTTTCACGCTTGAAATCGTGCCGAGCGATCAAGCGGAAAGCGCCG
GCGGACAGGTGGTGGGTCATTGTGAGAACGACACGCAGAAAATTGTCTACACCCGCCATGGGGATGACGCACCTAGTCCT
TAA

Upstream 100 bases:

>100_bases
TGCTGGCGCCCTGAGTATGACGAATTTCTTAAAAGCTTTACGCTGCTACGCTTATAACGCCACTTCATTATCATATAAGG
ATGACAGGATGAAGAAGTCA

Downstream 100 bases:

>100_bases
TACGTTCAGCGGGAGGCGCTGGACGTGCCTCCCTTATCTTCGCCTGCCCTGCTTTTGCCCACGTTAATCTTCCTGCCGCG
GACGCAAACCGTGCGGCAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 80; Mature: 80

Protein sequence:

>80_residues
MLLPLALALLVPLGAQAACEDVKADIARKIVANGVPESGFTLEIVPSDQAESAGGQVVGHCENDTQKIVYTRHGDDAPSP

Sequences:

>Translated_80_residues
MLLPLALALLVPLGAQAACEDVKADIARKIVANGVPESGFTLEIVPSDQAESAGGQVVGHCENDTQKIVYTRHGDDAPSP
>Mature_80_residues
MLLPLALALLVPLGAQAACEDVKADIARKIVANGVPESGFTLEIVPSDQAESAGGQVVGHCENDTQKIVYTRHGDDAPSP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081940, Length=55, Percent_Identity=60, Blast_Score=80, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010595
- ProDom:   PD336997 [H]

Pfam domain/function: PF06649 DUF1161 [H]

EC number: NA

Molecular weight: Translated: 8280; Mature: 8280

Theoretical pI: Translated: 4.27; Mature: 4.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLPLALALLVPLGAQAACEDVKADIARKIVANGVPESGFTLEIVPSDQAESAGGQVVGH
CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCEEEEE
CENDTQKIVYTRHGDDAPSP
CCCCCEEEEEEECCCCCCCC
>Mature Secondary Structure
MLLPLALALLVPLGAQAACEDVKADIARKIVANGVPESGFTLEIVPSDQAESAGGQVVGH
CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCEEEEE
CENDTQKIVYTRHGDDAPSP
CCCCCEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 9868784 [H]