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The map label for this gene is ynfM [H]

Identifier: 85059442

GI number: 85059442

Start: 2450485

End: 2451762

Strand: Reverse

Name: ynfM [H]

Synonym: SG1464

Alternate gene names: 85059442

Gene position: 2451762-2450485 (Counterclockwise)

Preceding gene: 85059445

Following gene: 85059441

Centisome position: 58.78

GC content: 58.61

Gene sequence:

>1278_bases
GTGAACACCTTTTCGCGCACGACGTCGTCAGCGCCGGACGCGCCGGCGACCCTAATCGCCCAGCCCGTTGCTGCACCGTC
CCGATCACTGTACATCAAACGCGGTACCCCGCAATTTATCCAGCTCACACTGGCCCTGTTTTCCGCCGGCCTGGCGACCT
TCGCCCTGCTCTATTGCGTACAACCTATCTTGCCGGTGCTCTCGGCGGATTTCGGCGTTTCCCCCGCCGCCAGTAGTCTT
TCGCTGTCGGTCTCCACCGGCACGATGGCGCTGGGTCTTTTGTTTACCGGCCCCTTGTCTGACGCCGTGGGCCGTAAATC
GGTCATGGTGGTGGCCTTGATACTGGCTGCCAGTTTTACAATTTGCAGCGCTTTCATAACTAGTTGGCAGGGTATTCTCT
TGACGCGAGCCTGTATTGGGTTGTCGCTAAGCGGCGTCGCCGCTGTGGCGATGACCTATCTTAGCGAAGAGATACACCCG
AGCGTAGTGGCGTTTTCCATGGGGCTTTATATTAGTGGCAACTCTATCGGCGGCATGAGCGGCCGGTTATTAAGCGGCGT
CATGACCGATTTGTTTTCCTGGCGTATAGCGGTGGGTTTTATCGGACTGGGCGCTTTACTGGCCGCAGTGATGTTCTGGC
GTATATTGCCCGCCTCGCGCCATTTCAGGCCGACCTCGCTGAAACCCCGCAACTTGGCAATCAATTTCCACTTGCACTGG
CGTGACAAGGGCCTGCCGCTTCTGTTTATCGAAGGCTTTTTGCTGATGGGCGCTTTTGTTACGTTGTTTAACTACATCGG
CTATCGCCTGCTCTCCCCGCCCTGGCTGCTTAGCCAGGCGGTAGTAGGATTATTGTCGGTCGTCTATTTAACCGGCTCCT
GGAGTTCGCCAAAGGCCGGCGCGCTTACCGGGCATTACGGCCGCGGACCGGTCATGATGGTGGCGATCATGATTATGATT
GCCGGTCTATTGCTAACGCTGGCCAAGCCACTGGCGGCGATTTTCGTCGGCATGATGCTGTTCGCCGGCGGTTTTTTTGC
CGCCCACTCCGTCGCCAGTGGATGGATTGGCCGGCGCGCGCGGCGCGCCAAAGGTCAGGCGTCTTCGCTGTATTTGTTTT
GTTACTATCTGGGTTCGAGTACCGCCGGGACGCTGGGTGGCTTCTTCTGGCACGGCTATGGTTGGTCCGGCGTGGTGGCG
TTTATCACGGTGCTATTGTTGGTCGGGCTGGTTGTCGCCCAGCGCCTGCGCCGGTTGCCCGAACTGCGCGCGGTCTGA

Upstream 100 bases:

>100_bases
AAAAAAATCGCCGTTTCCTATCCTTATTAAACGATTCATCTAGTTAGCGGCCCCTGCCGTTACTGTTAACCCTGCATGAT
GTTGGCATTAAGGATTTATC

Downstream 100 bases:

>100_bases
CGCGTAGCGTTAGGACGTCAGCGTAACCGCTAATCGGCTGCGGCACAGGTTTCCCACACGTGAACTGAAGATATTATGGC
GCGGCCTCATCGTTGATGTC

Product: putative transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 425; Mature: 425

Protein sequence:

>425_residues
MNTFSRTTSSAPDAPATLIAQPVAAPSRSLYIKRGTPQFIQLTLALFSAGLATFALLYCVQPILPVLSADFGVSPAASSL
SLSVSTGTMALGLLFTGPLSDAVGRKSVMVVALILAASFTICSAFITSWQGILLTRACIGLSLSGVAAVAMTYLSEEIHP
SVVAFSMGLYISGNSIGGMSGRLLSGVMTDLFSWRIAVGFIGLGALLAAVMFWRILPASRHFRPTSLKPRNLAINFHLHW
RDKGLPLLFIEGFLLMGAFVTLFNYIGYRLLSPPWLLSQAVVGLLSVVYLTGSWSSPKAGALTGHYGRGPVMMVAIMIMI
AGLLLTLAKPLAAIFVGMMLFAGGFFAAHSVASGWIGRRARRAKGQASSLYLFCYYLGSSTAGTLGGFFWHGYGWSGVVA
FITVLLLVGLVVAQRLRRLPELRAV

Sequences:

>Translated_425_residues
MNTFSRTTSSAPDAPATLIAQPVAAPSRSLYIKRGTPQFIQLTLALFSAGLATFALLYCVQPILPVLSADFGVSPAASSL
SLSVSTGTMALGLLFTGPLSDAVGRKSVMVVALILAASFTICSAFITSWQGILLTRACIGLSLSGVAAVAMTYLSEEIHP
SVVAFSMGLYISGNSIGGMSGRLLSGVMTDLFSWRIAVGFIGLGALLAAVMFWRILPASRHFRPTSLKPRNLAINFHLHW
RDKGLPLLFIEGFLLMGAFVTLFNYIGYRLLSPPWLLSQAVVGLLSVVYLTGSWSSPKAGALTGHYGRGPVMMVAIMIMI
AGLLLTLAKPLAAIFVGMMLFAGGFFAAHSVASGWIGRRARRAKGQASSLYLFCYYLGSSTAGTLGGFFWHGYGWSGVVA
FITVLLLVGLVVAQRLRRLPELRAV
>Mature_425_residues
MNTFSRTTSSAPDAPATLIAQPVAAPSRSLYIKRGTPQFIQLTLALFSAGLATFALLYCVQPILPVLSADFGVSPAASSL
SLSVSTGTMALGLLFTGPLSDAVGRKSVMVVALILAASFTICSAFITSWQGILLTRACIGLSLSGVAAVAMTYLSEEIHP
SVVAFSMGLYISGNSIGGMSGRLLSGVMTDLFSWRIAVGFIGLGALLAAVMFWRILPASRHFRPTSLKPRNLAINFHLHW
RDKGLPLLFIEGFLLMGAFVTLFNYIGYRLLSPPWLLSQAVVGLLSVVYLTGSWSSPKAGALTGHYGRGPVMMVAIMIMI
AGLLLTLAKPLAAIFVGMMLFAGGFFAAHSVASGWIGRRARRAKGQASSLYLFCYYLGSSTAGTLGGFFWHGYGWSGVVA
FITVLLLVGLVVAQRLRRLPELRAV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787880, Length=414, Percent_Identity=70.048309178744, Blast_Score=575, Evalue=1e-165,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR005829 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 45160; Mature: 45160

Theoretical pI: Translated: 10.93; Mature: 10.93

Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTFSRTTSSAPDAPATLIAQPVAAPSRSLYIKRGTPQFIQLTLALFSAGLATFALLYCV
CCCCCCCCCCCCCCCHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
QPILPVLSADFGVSPAASSLSLSVSTGTMALGLLFTGPLSDAVGRKSVMVVALILAASFT
HHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHEECCHHHHHCHHHHHHHHHHHHHHHH
ICSAFITSWQGILLTRACIGLSLSGVAAVAMTYLSEEIHPSVVAFSMGLYISGNSIGGMS
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHHHEEECEEEECCCCCCCH
GRLLSGVMTDLFSWRIAVGFIGLGALLAAVMFWRILPASRHFRPTSLKPRNLAINFHLHW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEE
RDKGLPLLFIEGFLLMGAFVTLFNYIGYRLLSPPWLLSQAVVGLLSVVYLTGSWSSPKAG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC
ALTGHYGRGPVMMVAIMIMIAGLLLTLAKPLAAIFVGMMLFAGGFFAAHSVASGWIGRRA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
RRAKGQASSLYLFCYYLGSSTAGTLGGFFWHGYGWSGVVAFITVLLLVGLVVAQRLRRLP
HHHCCCCCCEEEEEEEECCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCH
ELRAV
HHCCC
>Mature Secondary Structure
MNTFSRTTSSAPDAPATLIAQPVAAPSRSLYIKRGTPQFIQLTLALFSAGLATFALLYCV
CCCCCCCCCCCCCCCHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
QPILPVLSADFGVSPAASSLSLSVSTGTMALGLLFTGPLSDAVGRKSVMVVALILAASFT
HHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHEECCHHHHHCHHHHHHHHHHHHHHHH
ICSAFITSWQGILLTRACIGLSLSGVAAVAMTYLSEEIHPSVVAFSMGLYISGNSIGGMS
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHHHEEECEEEECCCCCCCH
GRLLSGVMTDLFSWRIAVGFIGLGALLAAVMFWRILPASRHFRPTSLKPRNLAINFHLHW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEE
RDKGLPLLFIEGFLLMGAFVTLFNYIGYRLLSPPWLLSQAVVGLLSVVYLTGSWSSPKAG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC
ALTGHYGRGPVMMVAIMIMIAGLLLTLAKPLAAIFVGMMLFAGGFFAAHSVASGWIGRRA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
RRAKGQASSLYLFCYYLGSSTAGTLGGFFWHGYGWSGVVAFITVLLLVGLVVAQRLRRLP
HHHCCCCCCEEEEEEEECCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCH
ELRAV
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]