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The map label for this gene is yoaB [H]

Identifier: 85059309

GI number: 85059309

Start: 2212505

End: 2212858

Strand: Reverse

Name: yoaB [H]

Synonym: SG1331

Alternate gene names: 85059309

Gene position: 2212858-2212505 (Counterclockwise)

Preceding gene: 85059312

Following gene: 85059307

Centisome position: 53.05

GC content: 58.19

Gene sequence:

>354_bases
ATGACCCTCCAGCGTATTGATGCCGGCGCCCGAATGTCTGATGCGGTGATTCACCATCAGACCCTTTATTACACCAGCGT
GGCGGCGGATGCCGCGCTCGATGAAGACATTACCGGCCAAACCCGCAGCGCGCTTGCCGCTATCGATGCCATGCTAGCAC
GCTGCAATACCGATAAACGCCGCCTGGTGGATGCCACCATCTTCCTGCCTGACGCGGCAGATTTCGCCGGGATGAATGCG
GTATGGGATAACTGGGTCGAGGCCGGCAGCGCGCCGGTGCGCTGTACTGTTCAGGCGGGCTTGATGAATCCGCGCTATAA
AATCGAAATCAAAATCGTCGCCGCGTTGTCATAA

Upstream 100 bases:

>100_bases
ACATGCGCAAACGCGTTTCGCAACCGCCATCGGGCACGCTGGGCTTCCCGCGCCGGTATGGTATGCTGTTGTTTTCACTC
AACCACTGAAAGGAAATGCA

Downstream 100 bases:

>100_bases
CGGCGAACCACCCTGCGCTTAATCATCATCGGGGTTGCTATCATAAGGATCCGTCTCGGCACGCGCCGCCGGCGTCTCAA
GCACCTCGGTATCCTCCTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 117; Mature: 116

Protein sequence:

>117_residues
MTLQRIDAGARMSDAVIHHQTLYYTSVAADAALDEDITGQTRSALAAIDAMLARCNTDKRRLVDATIFLPDAADFAGMNA
VWDNWVEAGSAPVRCTVQAGLMNPRYKIEIKIVAALS

Sequences:

>Translated_117_residues
MTLQRIDAGARMSDAVIHHQTLYYTSVAADAALDEDITGQTRSALAAIDAMLARCNTDKRRLVDATIFLPDAADFAGMNA
VWDNWVEAGSAPVRCTVQAGLMNPRYKIEIKIVAALS
>Mature_116_residues
TLQRIDAGARMSDAVIHHQTLYYTSVAADAALDEDITGQTRSALAAIDAMLARCNTDKRRLVDATIFLPDAADFAGMNAV
WDNWVEAGSAPVRCTVQAGLMNPRYKIEIKIVAALS

Specific function: Unknown

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RutC family [H]

Homologues:

Organism=Escherichia coli, GI87081979, Length=116, Percent_Identity=62.0689655172414, Blast_Score=142, Evalue=4e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013813
- InterPro:   IPR006175
- InterPro:   IPR019897 [H]

Pfam domain/function: PF01042 Ribonuc_L-PSP [H]

EC number: NA

Molecular weight: Translated: 12669; Mature: 12537

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: PS01094 UPF0076

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLQRIDAGARMSDAVIHHQTLYYTSVAADAALDEDITGQTRSALAAIDAMLARCNTDKR
CCCCCCCCCCCCHHHHHHHHHEEEEHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC
RLVDATIFLPDAADFAGMNAVWDNWVEAGSAPVRCTVQAGLMNPRYKIEIKIVAALS
EEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEEEEEEEEC
>Mature Secondary Structure 
TLQRIDAGARMSDAVIHHQTLYYTSVAADAALDEDITGQTRSALAAIDAMLARCNTDKR
CCCCCCCCCCCHHHHHHHHHEEEEHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC
RLVDATIFLPDAADFAGMNAVWDNWVEAGSAPVRCTVQAGLMNPRYKIEIKIVAALS
EEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]