| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is pykA [H]
Identifier: 85059246
GI number: 85059246
Start: 2132552
End: 2133994
Strand: Reverse
Name: pykA [H]
Synonym: SG1268
Alternate gene names: 85059246
Gene position: 2133994-2132552 (Counterclockwise)
Preceding gene: 85059247
Following gene: 85059244
Centisome position: 51.16
GC content: 58.56
Gene sequence:
>1443_bases ATGTCCAGACGGCTAAGAAGAACCAAAATTGTCACAACCCTCGGCCCCGCCACCGATCGCAATAATAATCTCGAAAAAGT GATCGCCGCCGGCGCCAACGTCGTACGCCTGAACTTTTCACACGGCAGCGCAAAAGATCATCTTTTGCGAGCGCAGAAAG TGCGCGAAATCTCGGCCCGACTCGGCCGGCACGTGGCGATACTCGGCGATTTGCAAGGGCCTAAAATCCGCGTTTCGACG TTCCGTGAAGGGAAAATTTTTTTGAACATCGGCGACAAATTCCTGCTGGATGCCTCACTTGGCCGCGGCGAGGGCGACCG CGAGCGGGTGGGCATTGATTATAAGGGCTTGCCCGACGATGTGGTGCCCGGCGATATTCTGCTGCTCGATGATGGCCGCG TGCAGCTCAAAATACTCGAAGTCCAGGGTATTCGGGTTTACACCGAGGTGACGGTAGGCGGTCCGCTGTCCAATAACAAG GGCATCAACAAGCTTGGCGGCGGTTTGTCCGCCGAAACGCTGACCGAAAAAGACAAAGCCGACATCATTACCGCCGCGCG AATTGGCGTTGATTACCTGGCGGTGTCCTTTCCCCGCACCGGCGAGGATTTGAACTATGCCCGCCGTCTGGCTCGTGACG CGGGCAGCTATGCCAAAATTGTCTCGAAGGTGGAGCGCGCCGAAGCCGTGGCGACCGAGGAAGCGATGGACGATATCATC CTCGCCTCGGATGTGGTGATGGTCGCCCGCGGCGATTTAGGGGTTGAAATTGGCGATCCGGAACTGGTGGGTATTCAAAA AAAATTGATCCGCCGCGCCCGTACGCTTAATCGCGCCGTCATCACCGCCACGCAGATGATGGAGTCGATGATAACCAATC CGATGCCGACGCGCGCGGAAGTCATGGACGTCGCCAACGCGGTGCTCGACGGCACCGATGCGGTCATGCTCTCGGCCGAG ACCGCCGCAGGGCAGTATCCCGCCGAAACGGTGGCCGCAATGGCCAGCGTCTGCCTCGGCGCGGAAAAGATCCCCAGCAT CAATGTGTCCAAACATCGGCTGGATGTGCAATTCGATAACATCGAAGAGGCCATCGCCATGTCGGCGATGTACGCCGCCA ACCACCTGAAAGGCATCACCGCCATTATCTCAATGACAGAATCGGGCCGCACCGCGCTTATGATGTCGCGTATCAGCTCG GGTCTGCCGATTTTTGCCCTCTCGCGCCACGAACATACCCTGAATCTGACCGCGCTTTATCGCGGCGTGACGCCGGTCTA CTTTGACGGCGACGGTGAAGGCGTGGCGGCGACGACCCACGCCACCAACTTGCTGCGCGATAAAGGCTTTCTGGTGTCGG GAGACACGGTCATTATCACCCAGGGCGATGTCATGGACATGGTCGGGACCACCAACACCAGCCGCATCCTGCGCGTGGAA TAA
Upstream 100 bases:
>100_bases CAGGGATTACCCGGCGCGGGGACCGGTCAAACGTCTGGCACCCCTCCGGAGCAGTCTTTTTGTTGTAACAACACCATTGC CCAAGTCAACGGAGTTATCC
Downstream 100 bases:
>100_bases TCGCCCGACAAACGCATCACGGGCCGCATCGGGCGGCCGTGATGTCCATCGCGGTGGGTTGTACGCGCATCGCGCGCAGC GCTGATAGACGCCGCAAATA
Product: pyruvate kinase
Products: NA
Alternate protein names: PK-2 [H]
Number of amino acids: Translated: 480; Mature: 479
Protein sequence:
>480_residues MSRRLRRTKIVTTLGPATDRNNNLEKVIAAGANVVRLNFSHGSAKDHLLRAQKVREISARLGRHVAILGDLQGPKIRVST FREGKIFLNIGDKFLLDASLGRGEGDRERVGIDYKGLPDDVVPGDILLLDDGRVQLKILEVQGIRVYTEVTVGGPLSNNK GINKLGGGLSAETLTEKDKADIITAARIGVDYLAVSFPRTGEDLNYARRLARDAGSYAKIVSKVERAEAVATEEAMDDII LASDVVMVARGDLGVEIGDPELVGIQKKLIRRARTLNRAVITATQMMESMITNPMPTRAEVMDVANAVLDGTDAVMLSAE TAAGQYPAETVAAMASVCLGAEKIPSINVSKHRLDVQFDNIEEAIAMSAMYAANHLKGITAIISMTESGRTALMMSRISS GLPIFALSRHEHTLNLTALYRGVTPVYFDGDGEGVAATTHATNLLRDKGFLVSGDTVIITQGDVMDMVGTTNTSRILRVE
Sequences:
>Translated_480_residues MSRRLRRTKIVTTLGPATDRNNNLEKVIAAGANVVRLNFSHGSAKDHLLRAQKVREISARLGRHVAILGDLQGPKIRVST FREGKIFLNIGDKFLLDASLGRGEGDRERVGIDYKGLPDDVVPGDILLLDDGRVQLKILEVQGIRVYTEVTVGGPLSNNK GINKLGGGLSAETLTEKDKADIITAARIGVDYLAVSFPRTGEDLNYARRLARDAGSYAKIVSKVERAEAVATEEAMDDII LASDVVMVARGDLGVEIGDPELVGIQKKLIRRARTLNRAVITATQMMESMITNPMPTRAEVMDVANAVLDGTDAVMLSAE TAAGQYPAETVAAMASVCLGAEKIPSINVSKHRLDVQFDNIEEAIAMSAMYAANHLKGITAIISMTESGRTALMMSRISS GLPIFALSRHEHTLNLTALYRGVTPVYFDGDGEGVAATTHATNLLRDKGFLVSGDTVIITQGDVMDMVGTTNTSRILRVE >Mature_479_residues SRRLRRTKIVTTLGPATDRNNNLEKVIAAGANVVRLNFSHGSAKDHLLRAQKVREISARLGRHVAILGDLQGPKIRVSTF REGKIFLNIGDKFLLDASLGRGEGDRERVGIDYKGLPDDVVPGDILLLDDGRVQLKILEVQGIRVYTEVTVGGPLSNNKG INKLGGGLSAETLTEKDKADIITAARIGVDYLAVSFPRTGEDLNYARRLARDAGSYAKIVSKVERAEAVATEEAMDDIIL ASDVVMVARGDLGVEIGDPELVGIQKKLIRRARTLNRAVITATQMMESMITNPMPTRAEVMDVANAVLDGTDAVMLSAET AAGQYPAETVAAMASVCLGAEKIPSINVSKHRLDVQFDNIEEAIAMSAMYAANHLKGITAIISMTESGRTALMMSRISSG LPIFALSRHEHTLNLTALYRGVTPVYFDGDGEGVAATTHATNLLRDKGFLVSGDTVIITQGDVMDMVGTTNTSRILRVE
Specific function: Glycolysis; final step. [C]
COG id: COG0469
COG function: function code G; Pyruvate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pyruvate kinase family [H]
Homologues:
Organism=Homo sapiens, GI33286422, Length=499, Percent_Identity=35.6713426853707, Blast_Score=245, Evalue=5e-65, Organism=Homo sapiens, GI33286420, Length=499, Percent_Identity=35.6713426853707, Blast_Score=245, Evalue=5e-65, Organism=Homo sapiens, GI33286418, Length=495, Percent_Identity=35.959595959596, Blast_Score=242, Evalue=7e-64, Organism=Homo sapiens, GI10835121, Length=501, Percent_Identity=34.5309381237525, Blast_Score=228, Evalue=8e-60, Organism=Homo sapiens, GI32967597, Length=501, Percent_Identity=34.5309381237525, Blast_Score=228, Evalue=1e-59, Organism=Homo sapiens, GI310128732, Length=290, Percent_Identity=33.7931034482759, Blast_Score=138, Evalue=9e-33, Organism=Homo sapiens, GI310128730, Length=290, Percent_Identity=33.7931034482759, Blast_Score=138, Evalue=9e-33, Organism=Homo sapiens, GI310128736, Length=236, Percent_Identity=31.7796610169492, Blast_Score=105, Evalue=1e-22, Organism=Homo sapiens, GI310128734, Length=236, Percent_Identity=31.7796610169492, Blast_Score=105, Evalue=1e-22, Organism=Homo sapiens, GI310128738, Length=215, Percent_Identity=31.1627906976744, Blast_Score=88, Evalue=1e-17, Organism=Escherichia coli, GI1788160, Length=480, Percent_Identity=87.7083333333333, Blast_Score=862, Evalue=0.0, Organism=Escherichia coli, GI1787965, Length=487, Percent_Identity=37.5770020533881, Blast_Score=280, Evalue=2e-76, Organism=Caenorhabditis elegans, GI17544584, Length=490, Percent_Identity=35.1020408163265, Blast_Score=261, Evalue=6e-70, Organism=Caenorhabditis elegans, GI17506831, Length=494, Percent_Identity=36.2348178137652, Blast_Score=232, Evalue=3e-61, Organism=Caenorhabditis elegans, GI71984413, Length=494, Percent_Identity=36.2348178137652, Blast_Score=232, Evalue=4e-61, Organism=Caenorhabditis elegans, GI17506829, Length=494, Percent_Identity=36.2348178137652, Blast_Score=232, Evalue=4e-61, Organism=Caenorhabditis elegans, GI71984406, Length=494, Percent_Identity=36.2348178137652, Blast_Score=232, Evalue=4e-61, Organism=Saccharomyces cerevisiae, GI6324923, Length=496, Percent_Identity=35.2822580645161, Blast_Score=251, Evalue=2e-67, Organism=Saccharomyces cerevisiae, GI6319279, Length=475, Percent_Identity=34.9473684210526, Blast_Score=237, Evalue=2e-63, Organism=Drosophila melanogaster, GI28571814, Length=501, Percent_Identity=36.127744510978, Blast_Score=260, Evalue=2e-69, Organism=Drosophila melanogaster, GI24648964, Length=501, Percent_Identity=36.127744510978, Blast_Score=260, Evalue=2e-69, Organism=Drosophila melanogaster, GI24648966, Length=421, Percent_Identity=35.1543942992874, Blast_Score=231, Evalue=1e-60, Organism=Drosophila melanogaster, GI24581235, Length=497, Percent_Identity=31.7907444668008, Blast_Score=218, Evalue=6e-57, Organism=Drosophila melanogaster, GI24646914, Length=289, Percent_Identity=33.5640138408304, Blast_Score=147, Evalue=2e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001697 - InterPro: IPR015813 - InterPro: IPR011037 - InterPro: IPR015794 - InterPro: IPR018209 - InterPro: IPR015793 - InterPro: IPR015795 - InterPro: IPR015806 [H]
Pfam domain/function: PF00224 PK; PF02887 PK_C [H]
EC number: =2.7.1.40 [H]
Molecular weight: Translated: 51690; Mature: 51559
Theoretical pI: Translated: 6.98; Mature: 6.98
Prosite motif: PS00110 PYRUVATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRRLRRTKIVTTLGPATDRNNNLEKVIAAGANVVRLNFSHGSAKDHLLRAQKVREISAR CCCCCCHHEEEEEECCCCCCCCCHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHH LGRHVAILGDLQGPKIRVSTFREGKIFLNIGDKFLLDASLGRGEGDRERVGIDYKGLPDD HCCEEEEEECCCCCEEEEEEEECCEEEEEECCEEEEECCCCCCCCCCCEECCCCCCCCCC VVPGDILLLDDGRVQLKILEVQGIRVYTEVTVGGPLSNNKGINKLGGGLSAETLTEKDKA CCCCCEEEEECCCEEEEEEEEECEEEEEEEEECCCCCCCCCCHHHCCCCCHHHHCCCCHH DIITAARIGVDYLAVSFPRTGEDLNYARRLARDAGSYAKIVSKVERAEAVATEEAMDDII CEEEHHHHCCEEEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH LASDVVMVARGDLGVEIGDPELVGIQKKLIRRARTLNRAVITATQMMESMITNPMPTRAE HHCCEEEEEECCCCEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH VMDVANAVLDGTDAVMLSAETAAGQYPAETVAAMASVCLGAEKIPSINVSKHRLDVQFDN HHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCHHHCCCCCCCCEEEEEEECC IEEAIAMSAMYAANHLKGITAIISMTESGRTALMMSRISSGLPIFALSRHEHTLNLTALY HHHHHHHHHHHHHHHHHHEEEEEEECCCCCHHHHHHHHCCCCCEEEEECCCCEEEEEEEE RGVTPVYFDGDGEGVAATTHATNLLRDKGFLVSGDTVIITQGDVMDMVGTTNTSRILRVE CCCCEEEECCCCCCEEEEHHHHHHHHCCCEEEECCEEEEECCCEEEHHCCCCCCEEEEEC >Mature Secondary Structure SRRLRRTKIVTTLGPATDRNNNLEKVIAAGANVVRLNFSHGSAKDHLLRAQKVREISAR CCCCCHHEEEEEECCCCCCCCCHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHH LGRHVAILGDLQGPKIRVSTFREGKIFLNIGDKFLLDASLGRGEGDRERVGIDYKGLPDD HCCEEEEEECCCCCEEEEEEEECCEEEEEECCEEEEECCCCCCCCCCCEECCCCCCCCCC VVPGDILLLDDGRVQLKILEVQGIRVYTEVTVGGPLSNNKGINKLGGGLSAETLTEKDKA CCCCCEEEEECCCEEEEEEEEECEEEEEEEEECCCCCCCCCCHHHCCCCCHHHHCCCCHH DIITAARIGVDYLAVSFPRTGEDLNYARRLARDAGSYAKIVSKVERAEAVATEEAMDDII CEEEHHHHCCEEEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH LASDVVMVARGDLGVEIGDPELVGIQKKLIRRARTLNRAVITATQMMESMITNPMPTRAE HHCCEEEEEECCCCEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH VMDVANAVLDGTDAVMLSAETAAGQYPAETVAAMASVCLGAEKIPSINVSKHRLDVQFDN HHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCHHHCCCCCCCCEEEEEEECC IEEAIAMSAMYAANHLKGITAIISMTESGRTALMMSRISSGLPIFALSRHEHTLNLTALY HHHHHHHHHHHHHHHHHHEEEEEEECCCCCHHHHHHHHCCCCCEEEEECCCCEEEEEEEE RGVTPVYFDGDGEGVAATTHATNLLRDKGFLVSGDTVIITQGDVMDMVGTTNTSRILRVE CCCCEEEECCCCCCEEEEHHHHHHHHCCCEEEECCEEEEECCCEEEHHCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503; 1732206; 1859631; 8439398 [H]