| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is 85059244
Identifier: 85059244
GI number: 85059244
Start: 2130135
End: 2130917
Strand: Reverse
Name: 85059244
Synonym: SG1266
Alternate gene names: NA
Gene position: 2130917-2130135 (Counterclockwise)
Preceding gene: 85059246
Following gene: 85059241
Centisome position: 51.09
GC content: 48.15
Gene sequence:
>783_bases ATGCGTCAATACCTGATTATTCCCCTATGCCTGCTATTATCGGCATGCTCCCCAAAAAAATATCCGGTGGCCATAGATGC GATTAGCGCCACCAAAGCGCAGCATATTATTAATGATGTGCAAACACATGAACAGGAAAGCCGTGGGGAATTAATTGAGT TGGTATCACAATCTTTCCTCAGCACTCCCTATCAGGCCAATATCTTAATTGGTTCAGCCACCGAGCCCGAAAAGCTGGTG GTGGATTTCAACGGCGTTGACTGCTTTACCATGCTAGATTACGTACACGCGCTGAGCCAATCGTCCAACAAGGCGGATTT TCTCGGTCAATTGGTAAAAACCCGCTACAAGAATGGTAAGGTATCTTTTGTAAACCGCAAGCATTTCTTCACAGATTGGT TTGCAAGCCAGTCGCGAAATGCGCGGGACGTCACCACCGAAATCAGTCCCAACTCCAAGATAATCCACAAGCAACTGAAC CTGAAAGCGGACGGCGGGCGGTTCATTCCCGCCATCGGCGTATTTGAGCGCGATATCACCTACATTCCCGCACAAGCGTT GGACCAGAATGCGCTTGCTGCTATCCACACAGGCGACTATATCGGCATTTATTCCAAACTTGACGGGCTTGATGTTTCCC ATGTGGGCATTGCCATCCGCAAAGGGGATCAGCTCTATTACCGAAATGCCTCATCTTTGCAGCGCAACCATAAAGTGGTA GATATCCCATTTATAGATTACATGCGTAACAAACCCGGGATCGTGGTATTGCGCGCCTTATAA
Upstream 100 bases:
>100_bases CAAGACATAAATGAATCAACAACAAAATTAAGGTTGTTTTTGACATCCAGCGTTATTTCCCTTCAACATTTTTTTCGTTT ACCGCGTTAAGGAAATTATA
Downstream 100 bases:
>100_bases AATCTGACGCGCTTTCCCGGGTGGGCAGCGCCGGCCCCGCGCCCTGGTCTCATCACGGGTCACGGGGGAAGTAAGCCGGC GACTCCCCGTGCCCTTTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 260; Mature: 260
Protein sequence:
>260_residues MRQYLIIPLCLLLSACSPKKYPVAIDAISATKAQHIINDVQTHEQESRGELIELVSQSFLSTPYQANILIGSATEPEKLV VDFNGVDCFTMLDYVHALSQSSNKADFLGQLVKTRYKNGKVSFVNRKHFFTDWFASQSRNARDVTTEISPNSKIIHKQLN LKADGGRFIPAIGVFERDITYIPAQALDQNALAAIHTGDYIGIYSKLDGLDVSHVGIAIRKGDQLYYRNASSLQRNHKVV DIPFIDYMRNKPGIVVLRAL
Sequences:
>Translated_260_residues MRQYLIIPLCLLLSACSPKKYPVAIDAISATKAQHIINDVQTHEQESRGELIELVSQSFLSTPYQANILIGSATEPEKLV VDFNGVDCFTMLDYVHALSQSSNKADFLGQLVKTRYKNGKVSFVNRKHFFTDWFASQSRNARDVTTEISPNSKIIHKQLN LKADGGRFIPAIGVFERDITYIPAQALDQNALAAIHTGDYIGIYSKLDGLDVSHVGIAIRKGDQLYYRNASSLQRNHKVV DIPFIDYMRNKPGIVVLRAL >Mature_260_residues MRQYLIIPLCLLLSACSPKKYPVAIDAISATKAQHIINDVQTHEQESRGELIELVSQSFLSTPYQANILIGSATEPEKLV VDFNGVDCFTMLDYVHALSQSSNKADFLGQLVKTRYKNGKVSFVNRKHFFTDWFASQSRNARDVTTEISPNSKIIHKQLN LKADGGRFIPAIGVFERDITYIPAQALDQNALAAIHTGDYIGIYSKLDGLDVSHVGIAIRKGDQLYYRNASSLQRNHKVV DIPFIDYMRNKPGIVVLRAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29099; Mature: 29099
Theoretical pI: Translated: 8.99; Mature: 8.99
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQYLIIPLCLLLSACSPKKYPVAIDAISATKAQHIINDVQTHEQESRGELIELVSQSFL CCCEEHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH STPYQANILIGSATEPEKLVVDFNGVDCFTMLDYVHALSQSSNKADFLGQLVKTRYKNGK CCCCEEEEEEECCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCC VSFVNRKHFFTDWFASQSRNARDVTTEISPNSKIIHKQLNLKADGGRFIPAIGVFERDIT EEEEECCHHHHHHHHCCCCCCCCEEEEECCCCEEEEEEECEECCCCEEECEECCCCCCCE YIPAQALDQNALAAIHTGDYIGIYSKLDGLDVSHVGIAIRKGDQLYYRNASSLQRNHKVV ECCHHHCCCCCEEEEECCCEEEEEECCCCCCCHHEEEEEECCCEEEECCHHHHHHCCEEE DIPFIDYMRNKPGIVVLRAL EECHHHHHCCCCCEEEEEEC >Mature Secondary Structure MRQYLIIPLCLLLSACSPKKYPVAIDAISATKAQHIINDVQTHEQESRGELIELVSQSFL CCCEEHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH STPYQANILIGSATEPEKLVVDFNGVDCFTMLDYVHALSQSSNKADFLGQLVKTRYKNGK CCCCEEEEEEECCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCC VSFVNRKHFFTDWFASQSRNARDVTTEISPNSKIIHKQLNLKADGGRFIPAIGVFERDIT EEEEECCHHHHHHHHCCCCCCCCEEEEECCCCEEEEEEECEECCCCEEECEECCCCCCCE YIPAQALDQNALAAIHTGDYIGIYSKLDGLDVSHVGIAIRKGDQLYYRNASSLQRNHKVV ECCHHHCCCCCEEEEECCCEEEEEECCCCCCCHHEEEEEECCCEEEECCHHHHHHCCEEE DIPFIDYMRNKPGIVVLRAL EECHHHHHCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA