| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is 85059184
Identifier: 85059184
GI number: 85059184
Start: 2020927
End: 2022204
Strand: Reverse
Name: 85059184
Synonym: SG1206
Alternate gene names: NA
Gene position: 2022204-2020927 (Counterclockwise)
Preceding gene: 85059185
Following gene: 85059183
Centisome position: 48.48
GC content: 37.32
Gene sequence:
>1278_bases GTGATAAAAATGAAAAAAAGCACAAACTTTATGTCAGAGTTTTCTTATAATTCAGTACCTACTTCGGGGCCTTATATTAA TTCCGTATTTAACTCAACATATGCAGAACTAATTTACACGGAACAATATGTCCCTTCTGAAGGTGATGCTGAACATGTAT ACTGGTCTACATGTAATCCTTACTTTGGAGAAAGAGGTAGTTATGCAGGTATTCAGCATCAAAAAGATAAAATACTAGAG GGTGTACCGTTTGTTTATAATAACATATTCTCTGTTTGGGATATGAAAGAAACCACACCTGATGAGCCTACAGAAGTAAA ACTAGAATACGGATGCCCTGGATTATATTCAAATCGCTTTGGTGGAGAAGGTACAGGCTTACATACGTCACATCCCATGC CCTGGAAAACCAATCAATGGTATGCAACTGCAATCAGACGTTGGTATATACAAGAGGAAGATGTTACTCATGCAGGGATG TTTATGTATTCTTATGAAACTAAAAAATGGGTACATTTTGCATCCGTGATGATTCCAAAAAAAGATGTTCTTATAAAGAA TAAAACTGTAAGTGGTTTTCTTGAGCGTTTTGCGGGTAATGCTCTTGGATATCACGGTATTTATGGACAACATTTTAAAA TGCATTCAGATGGTTCCTGGGAAAAACCTTTGTATTATAAAGCATCAGCCGGTGGTTCGCCGAGAACGTGGAATGCTGAG TCTGTAAACAGCAACACCAATATTAAGCTTATCGCCGGCGGTGATTTTGAAAATGACAAAAAAGAAAAAGAATTTAAAGT CAATCAATTCGATAAACGGCCGAAGCCGACAAAAGCACCTAGAATAGATGCAATTTCTACGGAACTTTTATCTGATACAT TGAAAGTTAGTTGGACTGTTGATGATGGTTTATCGCCACAATTGTCTTACGCTATTGAAGTGAGAGAGAAAGAAATTAAC GGCACTCTTGTGGCACAAGAATCAAAACTTATGCCACATCAAAGATTGGCATATATTAAACTCCCACAAAATTTGATGCC TGGAAAATACTTTGTGACATTGAAGATTACAAGCATCTTTAATGATGATTCGGATGTAAAATGTACCTCCTTTGAAGTCA ATAATTCAATCTATCCGGTATGGGATAAGAGCACTATATATCAACATGGCGATAGGGTAACCTTCGATAATTCCGACTGG GAAGCAAGATGGTGGAATGTTGGACAGGAGCCTCAAGTTACCACTCCTTCATCAGATTCCACATGGTTAAAGCTGTAA
Upstream 100 bases:
>100_bases GGCCCAGGAAATCTGTTAGTGCCAACGTCTCTAAAGAGCGGATCAGTCAGTGGGTTGTGGAGCGAGAGCTTTGCAAAAAT AGTCTATAATATTACTAAAG
Downstream 100 bases:
>100_bases AGGTTAATTGAAATTATTTAAGTATTAATTATTTACCACCAAGGGAGCAAGAGGCTTTATGTTTGTGAAAAGGCTTTTTG CTACCTCAATATTCGCCACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 425; Mature: 425
Protein sequence:
>425_residues MIKMKKSTNFMSEFSYNSVPTSGPYINSVFNSTYAELIYTEQYVPSEGDAEHVYWSTCNPYFGERGSYAGIQHQKDKILE GVPFVYNNIFSVWDMKETTPDEPTEVKLEYGCPGLYSNRFGGEGTGLHTSHPMPWKTNQWYATAIRRWYIQEEDVTHAGM FMYSYETKKWVHFASVMIPKKDVLIKNKTVSGFLERFAGNALGYHGIYGQHFKMHSDGSWEKPLYYKASAGGSPRTWNAE SVNSNTNIKLIAGGDFENDKKEKEFKVNQFDKRPKPTKAPRIDAISTELLSDTLKVSWTVDDGLSPQLSYAIEVREKEIN GTLVAQESKLMPHQRLAYIKLPQNLMPGKYFVTLKITSIFNDDSDVKCTSFEVNNSIYPVWDKSTIYQHGDRVTFDNSDW EARWWNVGQEPQVTTPSSDSTWLKL
Sequences:
>Translated_425_residues MIKMKKSTNFMSEFSYNSVPTSGPYINSVFNSTYAELIYTEQYVPSEGDAEHVYWSTCNPYFGERGSYAGIQHQKDKILE GVPFVYNNIFSVWDMKETTPDEPTEVKLEYGCPGLYSNRFGGEGTGLHTSHPMPWKTNQWYATAIRRWYIQEEDVTHAGM FMYSYETKKWVHFASVMIPKKDVLIKNKTVSGFLERFAGNALGYHGIYGQHFKMHSDGSWEKPLYYKASAGGSPRTWNAE SVNSNTNIKLIAGGDFENDKKEKEFKVNQFDKRPKPTKAPRIDAISTELLSDTLKVSWTVDDGLSPQLSYAIEVREKEIN GTLVAQESKLMPHQRLAYIKLPQNLMPGKYFVTLKITSIFNDDSDVKCTSFEVNNSIYPVWDKSTIYQHGDRVTFDNSDW EARWWNVGQEPQVTTPSSDSTWLKL >Mature_425_residues MIKMKKSTNFMSEFSYNSVPTSGPYINSVFNSTYAELIYTEQYVPSEGDAEHVYWSTCNPYFGERGSYAGIQHQKDKILE GVPFVYNNIFSVWDMKETTPDEPTEVKLEYGCPGLYSNRFGGEGTGLHTSHPMPWKTNQWYATAIRRWYIQEEDVTHAGM FMYSYETKKWVHFASVMIPKKDVLIKNKTVSGFLERFAGNALGYHGIYGQHFKMHSDGSWEKPLYYKASAGGSPRTWNAE SVNSNTNIKLIAGGDFENDKKEKEFKVNQFDKRPKPTKAPRIDAISTELLSDTLKVSWTVDDGLSPQLSYAIEVREKEIN GTLVAQESKLMPHQRLAYIKLPQNLMPGKYFVTLKITSIFNDDSDVKCTSFEVNNSIYPVWDKSTIYQHGDRVTFDNSDW EARWWNVGQEPQVTTPSSDSTWLKL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48746; Mature: 48746
Theoretical pI: Translated: 6.59; Mature: 6.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKMKKSTNFMSEFSYNSVPTSGPYINSVFNSTYAELIYTEQYVPSEGDAEHVYWSTCNP CEEECCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHEEEECCCCCCCCCCCEEEEECCCC YFGERGSYAGIQHQKDKILEGVPFVYNNIFSVWDMKETTPDEPTEVKLEYGCPGLYSNRF CCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHEEECCCCCCCCCCEEEEEECCCCCCCCCC GGEGTGLHTSHPMPWKTNQWYATAIRRWYIQEEDVTHAGMFMYSYETKKWVHFASVMIPK CCCCCCCCCCCCCCCCCCCHHHEEHHHHCCCCCCCCCCEEEEEEECCCCEEEEEEEEECC KDVLIKNKTVSGFLERFAGNALGYHGIYGQHFKMHSDGSWEKPLYYKASAGGSPRTWNAE CCEEEECCHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCEEEEECCCCCCCCCCCC SVNSNTNIKLIAGGDFENDKKEKEFKVNQFDKRPKPTKAPRIDAISTELLSDTLKVSWTV CCCCCCCEEEEECCCCCCCCCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEEE DDGLSPQLSYAIEVREKEINGTLVAQESKLMPHQRLAYIKLPQNLMPGKYFVTLKITSIF CCCCCCCEEEEEEEEEECCCCEEEECCCCCCCCHHEEEEECCCCCCCCEEEEEEEEEEEE NDDSDVKCTSFEVNNSIYPVWDKSTIYQHGDRVTFDNSDWEARWWNVGQEPQVTTPSSDS CCCCCCEEEEEEECCCEEEEECCCHHHHCCCEEEECCCCCCEEECCCCCCCCEECCCCCC TWLKL CEEEC >Mature Secondary Structure MIKMKKSTNFMSEFSYNSVPTSGPYINSVFNSTYAELIYTEQYVPSEGDAEHVYWSTCNP CEEECCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHEEEECCCCCCCCCCCEEEEECCCC YFGERGSYAGIQHQKDKILEGVPFVYNNIFSVWDMKETTPDEPTEVKLEYGCPGLYSNRF CCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHEEECCCCCCCCCCEEEEEECCCCCCCCCC GGEGTGLHTSHPMPWKTNQWYATAIRRWYIQEEDVTHAGMFMYSYETKKWVHFASVMIPK CCCCCCCCCCCCCCCCCCCHHHEEHHHHCCCCCCCCCCEEEEEEECCCCEEEEEEEEECC KDVLIKNKTVSGFLERFAGNALGYHGIYGQHFKMHSDGSWEKPLYYKASAGGSPRTWNAE CCEEEECCHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCEEEEECCCCCCCCCCCC SVNSNTNIKLIAGGDFENDKKEKEFKVNQFDKRPKPTKAPRIDAISTELLSDTLKVSWTV CCCCCCCEEEEECCCCCCCCCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEEE DDGLSPQLSYAIEVREKEINGTLVAQESKLMPHQRLAYIKLPQNLMPGKYFVTLKITSIF CCCCCCCEEEEEEEEEECCCCEEEECCCCCCCCHHEEEEECCCCCCCCEEEEEEEEEEEE NDDSDVKCTSFEVNNSIYPVWDKSTIYQHGDRVTFDNSDWEARWWNVGQEPQVTTPSSDS CCCCCCEEEEEEECCCEEEEECCCHHHHCCCEEEECCCCCCEEECCCCCCCCEECCCCCC TWLKL CEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA