| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is 85059183
Identifier: 85059183
GI number: 85059183
Start: 2020306
End: 2020644
Strand: Reverse
Name: 85059183
Synonym: SG1205
Alternate gene names: NA
Gene position: 2020644-2020306 (Counterclockwise)
Preceding gene: 85059184
Following gene: 85059182
Centisome position: 48.44
GC content: 55.75
Gene sequence:
>339_bases GTGCAGGACTTTCAGTCCCGTATCATCCCGATACGCGAAGCCATTACGTCGGCTCGCGGTGCTTGTCTGCCTGTGCTGTT AACGGGCTGCGGGCACACGCAGACAAGATACCTGTTCATCCCTCCCACGCCGATACCGGCCGAGCTGCTCGATGACTGTC CACCACCGGTTATCCCAGAGCACATGACCTGGGGCGACAGTGTGATACTCAACGAGCAACTGCTGCTGGCGCTGGAGATG TGTAATCAGGACAAAACCGCACTGAGACAAATTGAGGCCCAAAACCATGACGAAGCACGAAAAACAGCCACTCAACACCC TCTGCCGTTATCTGAATGA
Upstream 100 bases:
>100_bases AGCGTGACGCCGCCCGCGCACAGTTTACCCACTATGAACAGGCGGTAGCGCTGTTCAACCAGATAGCCGGAGCGCGACAC AGGATGCACATCAGCAAGCC
Downstream 100 bases:
>100_bases CGCCACGGTCTGGCGCGGCGTGGTGGCAGCCGCAAAAGCCGCGCTTTTTAACGAAAAAAACCCATGCTAAAACCTGATTC GCTCCGTGCGGCATTAACCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 112; Mature: 112
Protein sequence:
>112_residues MQDFQSRIIPIREAITSARGACLPVLLTGCGHTQTRYLFIPPTPIPAELLDDCPPPVIPEHMTWGDSVILNEQLLLALEM CNQDKTALRQIEAQNHDEARKTATQHPLPLSE
Sequences:
>Translated_112_residues MQDFQSRIIPIREAITSARGACLPVLLTGCGHTQTRYLFIPPTPIPAELLDDCPPPVIPEHMTWGDSVILNEQLLLALEM CNQDKTALRQIEAQNHDEARKTATQHPLPLSE >Mature_112_residues MQDFQSRIIPIREAITSARGACLPVLLTGCGHTQTRYLFIPPTPIPAELLDDCPPPVIPEHMTWGDSVILNEQLLLALEM CNQDKTALRQIEAQNHDEARKTATQHPLPLSE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12493; Mature: 12493
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQDFQSRIIPIREAITSARGACLPVLLTGCGHTQTRYLFIPPTPIPAELLDDCPPPVIPE CCCHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCEEEEECCCCCCHHHHHCCCCCCCCC HMTWGDSVILNEQLLLALEMCNQDKTALRQIEAQNHDEARKTATQHPLPLSE CCCCCCCEEEHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHCCCCCCCCC >Mature Secondary Structure MQDFQSRIIPIREAITSARGACLPVLLTGCGHTQTRYLFIPPTPIPAELLDDCPPPVIPE CCCHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCEEEEECCCCCCHHHHHCCCCCCCCC HMTWGDSVILNEQLLLALEMCNQDKTALRQIEAQNHDEARKTATQHPLPLSE CCCCCCCEEEHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA