| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is 85059185
Identifier: 85059185
GI number: 85059185
Start: 2022335
End: 2023066
Strand: Reverse
Name: 85059185
Synonym: SG1207
Alternate gene names: NA
Gene position: 2023066-2022335 (Counterclockwise)
Preceding gene: 85059186
Following gene: 85059184
Centisome position: 48.5
GC content: 63.8
Gene sequence:
>732_bases ATGAGTAATCCTGCCCGTTATCACCGCGCCTTTGTAGCCGCCGAGTTGGCGGCCTCACAGGATGAAAGCGCGCAAATGAG CCATCTGGGCCATTACGAGCTGCTGCTGTTCAAGCTGAAGCAGGATTTGGACCGGCTGCATCACGTCGAATCCCGCCGCC GCAAGGCGCAGCTCAAGCGCGAGATGTTGCCCACCTATCAGCCCTGGGTCGCCGGCGTGCTGGCAAGCGGCACCGGGGCG CAGGACGCGGTGCTGATGCGGATGCTGGTCTGGCTGCTGGATGTGGGTGACATCACCGCGGCGCTGGATATCGGCGACTA TGCCCTGCGCCACGCCCTGCTGGCCCCGGACGGATTCGAGCGCGCCACGCCCTGTCTTATTGCAGAAAAGGTCACCGCCA GCGCCCAGCGCAACCTGAATGACGGCCAGCCGCTCGATACTGAGCAGCTCTTGCGCGCCCGCTCATTGCTGGCTGGGCAG GATATGCCGGACAAGGTGAAGGCCTGTTTGCTAAAAGTAGTGGGCCACGCGCTACGCCAGGACGGTACCCTGACCCCGGT CCGTGTGCGTGAGGCGGCGCTGAACGCCATGCATGAGGTGAATACCCGGCTGGCCGTCTGGCATCGGGCGCAGGAGCGCG CCGGCACTCTGGCGCTGGACGCGGTACCCGCTGAACCGGGCCTGATTAAGCGCCGACAGAAAGAGAAAGCGTTGTTTGAG TCAAGAGAGTAA
Upstream 100 bases:
>100_bases AGTATGTGGTCGAGGATTATCAGTGCACGGCGCTGATTGAAAATATCCAGATCCTCGAGCCGGAAGTCACGCCTCCAAAA AGCCAGGGGAATAAGGGCTG
Downstream 100 bases:
>100_bases ATGAATTGACCCGTACCTGTGACGAGATACGGCCCAGGAAATCTGTTAGTGCCAACGTCTCTAAAGAGCGGATCAGTCAG TGGGTTGTGGAGCGAGAGCT
Product: hypothetical protein
Products: NA
Alternate protein names: Small Terminase Subunit; Terminase Endonuclease Subunit; Phage Terminase; Prophage Small Terminase Subunit; Phage Terminase/Endonuclease Subunit; Phage Terminase Endonuclease Small Subunit M; Terminase-Like Protein; Phage R Protein; Gp1 Phage Terminase Endonuclease Subunit; R Protein; Phage Terminase Endonuclease Subunit; Terminase Small Subunit; Bacteriophage-Related Terminase; Phage P2 Small Terminase Subunit GpM-Like Protein; Terminase; Bacteriophage Terminase Small Subunit; Bacteriophage Protein; Phage-Related Terminase
Number of amino acids: Translated: 243; Mature: 242
Protein sequence:
>243_residues MSNPARYHRAFVAAELAASQDESAQMSHLGHYELLLFKLKQDLDRLHHVESRRRKAQLKREMLPTYQPWVAGVLASGTGA QDAVLMRMLVWLLDVGDITAALDIGDYALRHALLAPDGFERATPCLIAEKVTASAQRNLNDGQPLDTEQLLRARSLLAGQ DMPDKVKACLLKVVGHALRQDGTLTPVRVREAALNAMHEVNTRLAVWHRAQERAGTLALDAVPAEPGLIKRRQKEKALFE SRE
Sequences:
>Translated_243_residues MSNPARYHRAFVAAELAASQDESAQMSHLGHYELLLFKLKQDLDRLHHVESRRRKAQLKREMLPTYQPWVAGVLASGTGA QDAVLMRMLVWLLDVGDITAALDIGDYALRHALLAPDGFERATPCLIAEKVTASAQRNLNDGQPLDTEQLLRARSLLAGQ DMPDKVKACLLKVVGHALRQDGTLTPVRVREAALNAMHEVNTRLAVWHRAQERAGTLALDAVPAEPGLIKRRQKEKALFE SRE >Mature_242_residues SNPARYHRAFVAAELAASQDESAQMSHLGHYELLLFKLKQDLDRLHHVESRRRKAQLKREMLPTYQPWVAGVLASGTGAQ DAVLMRMLVWLLDVGDITAALDIGDYALRHALLAPDGFERATPCLIAEKVTASAQRNLNDGQPLDTEQLLRARSLLAGQD MPDKVKACLLKVVGHALRQDGTLTPVRVREAALNAMHEVNTRLAVWHRAQERAGTLALDAVPAEPGLIKRRQKEKALFES RE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27031; Mature: 26899
Theoretical pI: Translated: 9.13; Mature: 9.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNPARYHRAFVAAELAASQDESAQMSHLGHYELLLFKLKQDLDRLHHVESRRRKAQLKR CCCHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EMLPTYQPWVAGVLASGTGAQDAVLMRMLVWLLDVGDITAALDIGDYALRHALLAPDGFE HHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC RATPCLIAEKVTASAQRNLNDGQPLDTEQLLRARSLLAGQDMPDKVKACLLKVVGHALRQ CCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHC DGTLTPVRVREAALNAMHEVNTRLAVWHRAQERAGTLALDAVPAEPGLIKRRQKEKALFE CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHC SRE CCC >Mature Secondary Structure SNPARYHRAFVAAELAASQDESAQMSHLGHYELLLFKLKQDLDRLHHVESRRRKAQLKR CCHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EMLPTYQPWVAGVLASGTGAQDAVLMRMLVWLLDVGDITAALDIGDYALRHALLAPDGFE HHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC RATPCLIAEKVTASAQRNLNDGQPLDTEQLLRARSLLAGQDMPDKVKACLLKVVGHALRQ CCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHC DGTLTPVRVREAALNAMHEVNTRLAVWHRAQERAGTLALDAVPAEPGLIKRRQKEKALFE CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHC SRE CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA