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The map label for this gene is accR [H]

Identifier: 85059114

GI number: 85059114

Start: 1886968

End: 1887738

Strand: Reverse

Name: accR [H]

Synonym: SG1136

Alternate gene names: 85059114

Gene position: 1887738-1886968 (Counterclockwise)

Preceding gene: 85059115

Following gene: 85059113

Centisome position: 45.26

GC content: 63.16

Gene sequence:

>771_bases
TTGCCGCCAGCGTCTGCAGTTCCGCCTGCAGCCGGTTGCCTACGTCCAGGCTATGGGCCTGGAGACCTTCACGCGCAATC
ACCTCCAGCACCACCCGCGCGGCGGGACATCATCGCACTGGAAGCACAGGGGATACTGCGGCGGGTCCACGGTGGCGCAG
TGGCGGTCAGACCGGCGTCGGAGCCGCCGCTTGCCGTTCGCAGCGGGGTTCGGGCCAGGGAGAAACACGCCATTGTCCGT
GCCGCGACGCGGCTGTTGCAGCCAGGACAAACCCTGTTTCTCGACGCCGGCAGTACTACCACGATGCTGGCGGAGGAATT
AAGCGCCTTGGCCGGTTTGACCATATTGACCAATAGTCTTGACGCCGTGCGCAAACTGGCGGCGGCCGGTGAGTGCAAGC
CCTGCACACATCAGATGACGCTTATCGGCGGTGAGCTGGCGCCCGGCGGACATGCGATCATCGGTGCTACCGCAATCGCC
AGTATCTATCGCTATCGGGCGGATTTTGCCATACTGTCGCCGGTCGGTATTGATGCGCGCGAAGGCGCCAGCAGCTATGA
CCATCAGGAGGCCGAAGTGGCGCGAGCGATGGCGCAGCGGGCGACCCGACTGGTTATTCTGGCGGATCATGGCAAGCTTG
GCGTCACCAGTCGCGCGGTTTACGCTTCCCCGGACGGTATTGCGCTGCTGATAACGGATAAAGCCGCGGCGGACAAACCG
GCGTTCCAGGCGTTAAATCGGGTATTGACCGAGGTCATCGTCGCAGGATAA

Upstream 100 bases:

>100_bases
AACGCCAGCGCTTTATCCGGTGTTTTACACTCTCGATCGCTCACCAACTCAAAACCAATAAACAACCCCGCGCCACGCAC
GTCGCCCACGCAGGGATATT

Downstream 100 bases:

>100_bases
ATGAACTATGCTTATCACTTCGCAGGACGTAGCGTCATGCGCCCCCGTCTGCGGCTGATATCAGCAGCGCGGTTAATCGC
CGGAGAGGGCTGCGGATGTC

Product: putative transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 255

Protein sequence:

>256_residues
MPPASAVPPAAGCLRPGYGPGDLHAQSPPAPPARRDIIALEAQGILRRVHGGAVAVRPASEPPLAVRSGVRAREKHAIVR
AATRLLQPGQTLFLDAGSTTTMLAEELSALAGLTILTNSLDAVRKLAAAGECKPCTHQMTLIGGELAPGGHAIIGATAIA
SIYRYRADFAILSPVGIDAREGASSYDHQEAEVARAMAQRATRLVILADHGKLGVTSRAVYASPDGIALLITDKAAADKP
AFQALNRVLTEVIVAG

Sequences:

>Translated_256_residues
MPPASAVPPAAGCLRPGYGPGDLHAQSPPAPPARRDIIALEAQGILRRVHGGAVAVRPASEPPLAVRSGVRAREKHAIVR
AATRLLQPGQTLFLDAGSTTTMLAEELSALAGLTILTNSLDAVRKLAAAGECKPCTHQMTLIGGELAPGGHAIIGATAIA
SIYRYRADFAILSPVGIDAREGASSYDHQEAEVARAMAQRATRLVILADHGKLGVTSRAVYASPDGIALLITDKAAADKP
AFQALNRVLTEVIVAG
>Mature_255_residues
PPASAVPPAAGCLRPGYGPGDLHAQSPPAPPARRDIIALEAQGILRRVHGGAVAVRPASEPPLAVRSGVRAREKHAIVRA
ATRLLQPGQTLFLDAGSTTTMLAEELSALAGLTILTNSLDAVRKLAAAGECKPCTHQMTLIGGELAPGGHAIIGATAIAS
IYRYRADFAILSPVGIDAREGASSYDHQEAEVARAMAQRATRLVILADHGKLGVTSRAVYASPDGIALLITDKAAADKPA
FQALNRVLTEVIVAG

Specific function: Represses opine catabolism and conjugal transfer of the nopaline Ti plasmid pTiC58 [H]

COG id: COG1349

COG function: function code KG; Transcriptional regulators of sugar metabolism

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH deoR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789059, Length=225, Percent_Identity=30.2222222222222, Blast_Score=98, Evalue=6e-22,
Organism=Escherichia coli, GI1789829, Length=218, Percent_Identity=29.3577981651376, Blast_Score=95, Evalue=5e-21,
Organism=Escherichia coli, GI1788069, Length=218, Percent_Identity=32.1100917431193, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI1789519, Length=227, Percent_Identity=28.1938325991189, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI87082344, Length=201, Percent_Identity=28.8557213930348, Blast_Score=75, Evalue=3e-15,
Organism=Escherichia coli, GI226510968, Length=184, Percent_Identity=30.9782608695652, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1790635, Length=207, Percent_Identity=28.5024154589372, Blast_Score=65, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014036
- InterPro:   IPR001034
- InterPro:   IPR018356
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00455 DeoR; PF08220 HTH_DeoR [H]

EC number: NA

Molecular weight: Translated: 26429; Mature: 26298

Theoretical pI: Translated: 9.20; Mature: 9.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPASAVPPAAGCLRPGYGPGDLHAQSPPAPPARRDIIALEAQGILRRVHGGAVAVRPAS
CCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHCCCEEEEECCC
EPPLAVRSGVRAREKHAIVRAATRLLQPGQTLFLDAGSTTTMLAEELSALAGLTILTNSL
CCCHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHH
DAVRKLAAAGECKPCTHQMTLIGGELAPGGHAIIGATAIASIYRYRADFAILSPVGIDAR
HHHHHHHHCCCCCCCCCEEEEECCEECCCCCEEHHHHHHHHHHHHHCCEEEECCCCCCCC
EGASSYDHQEAEVARAMAQRATRLVILADHGKLGVTSRAVYASPDGIALLITDKAAADKP
CCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEECCCCEEEEEECCCCCCCH
AFQALNRVLTEVIVAG
HHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PPASAVPPAAGCLRPGYGPGDLHAQSPPAPPARRDIIALEAQGILRRVHGGAVAVRPAS
CCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHCCCEEEEECCC
EPPLAVRSGVRAREKHAIVRAATRLLQPGQTLFLDAGSTTTMLAEELSALAGLTILTNSL
CCCHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHH
DAVRKLAAAGECKPCTHQMTLIGGELAPGGHAIIGATAIASIYRYRADFAILSPVGIDAR
HHHHHHHHCCCCCCCCCEEEEECCEECCCCCEEHHHHHHHHHHHHHCCEEEECCCCCCCC
EGASSYDHQEAEVARAMAQRATRLVILADHGKLGVTSRAVYASPDGIALLITDKAAADKP
CCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEECCCCEEEEEECCCCCCCH
AFQALNRVLTEVIVAG
HHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1731335; 9393724; 11743193; 11743194 [H]