| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
Click here to switch to the map view.
The map label for this gene is 85058947
Identifier: 85058947
GI number: 85058947
Start: 1595620
End: 1596189
Strand: Reverse
Name: 85058947
Synonym: SG0969
Alternate gene names: NA
Gene position: 1596189-1595620 (Counterclockwise)
Preceding gene: 85058948
Following gene: 85058946
Centisome position: 38.27
GC content: 49.3
Gene sequence:
>570_bases TTGAACTATACCAATATTGCCATGGTGGGCACCGACGACGGCAATCGCACGGCGGTCTCCTCACCGTTATCGCCGACGAT GTTAAAAAAAACACCGCTATTCTATGCGGCGCAAGATGCTTACGTTAAAGGTTTCGTGGTCATCACGGATTCGCTGGTCA AACTTTTGAGTTGTCACGATTGTGCCGATGCGAAAAATCGAAGGGATTTGGCGAAAAATGAATTGTTAAAGCAAATTATT CTGCTCTCGTCCCCGGTTAACCGATTTATTAGCTTACAGCACGATGTGTGGGCGCAAGTGCCGAAAATCTGCTCAACTAA CCCGAAAGAGGTGCTTACCCGGCTTCAGGTGCACTACAGCAACGGCCTGATGACCTCATTAACACAGTACGCCGAAAAAC ATCGGCTGACGCTGCCCAAGGAGGAGGATGTGAACGATTTTATCAACTTGCATGCCGAGCTGAAAAGCGCGATCATGATG AATAGCGCGGACTGGCTGATGCTTATCATACGCGATTATGCCGCCAGTCAACGCGCGTGCAGAGATTGGCATTTCGTGCC ATATCGCTGA
Upstream 100 bases:
>100_bases AAATCATCCACGAAATCAATCAGCAGCATACGCCACCCTCTCCGAAACCTCATACACCAGAAATGAGCATAACTCCGACT TCATTGATAACACAGCGCGT
Downstream 100 bases:
>100_bases GTGAACAGCCACCGGTTAACGGCCCGTTTTTTGCCCCAGGCGGCGTTAGGCGTCATCAGGCAGCGTTAAGCGTCGCGATG CGAAAGGCAGCCATTGCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 189; Mature: 189
Protein sequence:
>189_residues MNYTNIAMVGTDDGNRTAVSSPLSPTMLKKTPLFYAAQDAYVKGFVVITDSLVKLLSCHDCADAKNRRDLAKNELLKQII LLSSPVNRFISLQHDVWAQVPKICSTNPKEVLTRLQVHYSNGLMTSLTQYAEKHRLTLPKEEDVNDFINLHAELKSAIMM NSADWLMLIIRDYAASQRACRDWHFVPYR
Sequences:
>Translated_189_residues MNYTNIAMVGTDDGNRTAVSSPLSPTMLKKTPLFYAAQDAYVKGFVVITDSLVKLLSCHDCADAKNRRDLAKNELLKQII LLSSPVNRFISLQHDVWAQVPKICSTNPKEVLTRLQVHYSNGLMTSLTQYAEKHRLTLPKEEDVNDFINLHAELKSAIMM NSADWLMLIIRDYAASQRACRDWHFVPYR >Mature_189_residues MNYTNIAMVGTDDGNRTAVSSPLSPTMLKKTPLFYAAQDAYVKGFVVITDSLVKLLSCHDCADAKNRRDLAKNELLKQII LLSSPVNRFISLQHDVWAQVPKICSTNPKEVLTRLQVHYSNGLMTSLTQYAEKHRLTLPKEEDVNDFINLHAELKSAIMM NSADWLMLIIRDYAASQRACRDWHFVPYR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21515; Mature: 21515
Theoretical pI: Translated: 8.61; Mature: 8.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYTNIAMVGTDDGNRTAVSSPLSPTMLKKTPLFYAAQDAYVKGFVVITDSLVKLLSCHD CCCCEEEEEECCCCCCCEECCCCCCHHHHCCCCEEEECCHHHEEHEEHHHHHHHHHHHHC CADAKNRRDLAKNELLKQIILLSSPVNRFISLQHDVWAQVPKICSTNPKEVLTRLQVHYS CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC NGLMTSLTQYAEKHRLTLPKEEDVNDFINLHAELKSAIMMNSADWLMLIIRDYAASQRAC CCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH RDWHFVPYR HCCCCCCCC >Mature Secondary Structure MNYTNIAMVGTDDGNRTAVSSPLSPTMLKKTPLFYAAQDAYVKGFVVITDSLVKLLSCHD CCCCEEEEEECCCCCCCEECCCCCCHHHHCCCCEEEECCHHHEEHEEHHHHHHHHHHHHC CADAKNRRDLAKNELLKQIILLSSPVNRFISLQHDVWAQVPKICSTNPKEVLTRLQVHYS CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC NGLMTSLTQYAEKHRLTLPKEEDVNDFINLHAELKSAIMMNSADWLMLIIRDYAASQRAC CCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH RDWHFVPYR HCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA