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The map label for this gene is yadS [H]

Identifier: 85058480

GI number: 85058480

Start: 870709

End: 871326

Strand: Reverse

Name: yadS [H]

Synonym: SG0502

Alternate gene names: 85058480

Gene position: 871326-870709 (Counterclockwise)

Preceding gene: 85058481

Following gene: 85058478

Centisome position: 20.89

GC content: 58.74

Gene sequence:

>618_bases
ATGCTGTACTGGCTGGATATTCTCAGTACGGCGGTGTTCGCCATTTCCGGCGTTCTGCTGGCCGGCAAATTGCACATGGA
TCCCTTCGGCGTGCTGGTGCTCAGCGTGGTGACCGCGGTCGATGGCTGCACCATCCGCGATATGGCGCTGGCTAACGGCC
CCGTATTCTGGGTACGCGATTCCACCGATTTGGTGGTGGCCATTATCACCTGTTTCGTCACCTTGCTTGTCATCGGCCAG
CCGCGCCATCTGCCGAAATGGATCCTGCCGGTGCTGGATGCTATCGGGCTGGCGGTATTTGTCGGTATCGGCGTCAATAA
AGCATTCTCCAGCGGCGCCGTGCCACTTATCGCGGTATGTATGGGGGTCATTACCGGCGTGGGAGGCGGCATGCTGCGGG
ATGTGCTGGCGCGAGAAATTCCGCTTATCCTGCGCACCGAGATTTACTCCACCACCTGTATCGCCGGCGGTATTGTGCAT
ACCGTGACCTACAGTGAGTGGCGTTTCACGCTTCAGCACGCCGCCATGCTGGGAATAGCGACGACGCTGCTTATCCGGCT
GGCGGCCATCTGCTGGCACCTAAAACTGCCGGTATTTGAATTTCACAGCCGCAACTAG

Upstream 100 bases:

>100_bases
ACAGTTTTACCCGTCCGGGGCCGCGCATTCTGCTGGCGGCGCAGCAGCTTTGTACGCAACTGGCGCCAATCCGCGCCGCC
CTCCCGGCAAAGGTGCCCTG

Downstream 100 bases:

>100_bases
CGCCGACCGCCGCGCCGGCGGAACCGACATAGGGCCCTATCGCGGGCATAAAAAACCGGCACGCGGCGCGTCAGATGCTG
AACGACGACCCACAACCGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MLYWLDILSTAVFAISGVLLAGKLHMDPFGVLVLSVVTAVDGCTIRDMALANGPVFWVRDSTDLVVAIITCFVTLLVIGQ
PRHLPKWILPVLDAIGLAVFVGIGVNKAFSSGAVPLIAVCMGVITGVGGGMLRDVLAREIPLILRTEIYSTTCIAGGIVH
TVTYSEWRFTLQHAAMLGIATTLLIRLAAICWHLKLPVFEFHSRN

Sequences:

>Translated_205_residues
MLYWLDILSTAVFAISGVLLAGKLHMDPFGVLVLSVVTAVDGCTIRDMALANGPVFWVRDSTDLVVAIITCFVTLLVIGQ
PRHLPKWILPVLDAIGLAVFVGIGVNKAFSSGAVPLIAVCMGVITGVGGGMLRDVLAREIPLILRTEIYSTTCIAGGIVH
TVTYSEWRFTLQHAAMLGIATTLLIRLAAICWHLKLPVFEFHSRN
>Mature_205_residues
MLYWLDILSTAVFAISGVLLAGKLHMDPFGVLVLSVVTAVDGCTIRDMALANGPVFWVRDSTDLVVAIITCFVTLLVIGQ
PRHLPKWILPVLDAIGLAVFVGIGVNKAFSSGAVPLIAVCMGVITGVGGGMLRDVLAREIPLILRTEIYSTTCIAGGIVH
TVTYSEWRFTLQHAAMLGIATTLLIRLAAICWHLKLPVFEFHSRN

Specific function: Unknown

COG id: COG2860

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0126 family [H]

Homologues:

Organism=Escherichia coli, GI1786352, Length=205, Percent_Identity=71.219512195122, Blast_Score=271, Evalue=2e-74,
Organism=Escherichia coli, GI87082304, Length=160, Percent_Identity=35.625, Blast_Score=98, Evalue=4e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005115 [H]

Pfam domain/function: PF03458 UPF0126 [H]

EC number: NA

Molecular weight: Translated: 22095; Mature: 22095

Theoretical pI: Translated: 7.91; Mature: 7.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLYWLDILSTAVFAISGVLLAGKLHMDPFGVLVLSVVTAVDGCTIRDMALANGPVFWVRD
CCHHHHHHHHHHHHHHHHHHCCEECCCHHHHHHHHHHHHHCCCCCHHHHHCCCCEEEEEC
STDLVVAIITCFVTLLVIGQPRHLPKWILPVLDAIGLAVFVGIGVNKAFSSGAVPLIAVC
CCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHCCCCCHHHHHHH
MGVITGVGGGMLRDVLAREIPLILRTEIYSTTCIAGGIVHTVTYSEWRFTLQHAAMLGIA
HHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHEEHHHHHHHHHHHHHHHHH
TTLLIRLAAICWHLKLPVFEFHSRN
HHHHHHHHHHHHHHCCCHHHCCCCC
>Mature Secondary Structure
MLYWLDILSTAVFAISGVLLAGKLHMDPFGVLVLSVVTAVDGCTIRDMALANGPVFWVRD
CCHHHHHHHHHHHHHHHHHHCCEECCCHHHHHHHHHHHHHCCCCCHHHHHCCCCEEEEEC
STDLVVAIITCFVTLLVIGQPRHLPKWILPVLDAIGLAVFVGIGVNKAFSSGAVPLIAVC
CCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHCCCCCHHHHHHH
MGVITGVGGGMLRDVLAREIPLILRTEIYSTTCIAGGIVHTVTYSEWRFTLQHAAMLGIA
HHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHEEHHHHHHHHHHHHHHHHH
TTLLIRLAAICWHLKLPVFEFHSRN
HHHHHHHHHHHHHHCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]