Definition Sodalis glossinidius str. 'morsitans', complete genome.
Accession NC_007712
Length 4,171,146

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The map label for this gene is 85058162

Identifier: 85058162

GI number: 85058162

Start: 349791

End: 350318

Strand: Reverse

Name: 85058162

Synonym: SG0184

Alternate gene names: NA

Gene position: 350318-349791 (Counterclockwise)

Preceding gene: 85058166

Following gene: 85058160

Centisome position: 8.4

GC content: 55.11

Gene sequence:

>528_bases
ATGAAAAAATCTTACGCTGTTGCCGCCTGCCTGCTCTGTACCCTCACGTTAGCTCCCGCCGTCAAAGCAGCGGACGAGAC
GCCACAGTTTCGCTGCAAGCCGGGCGAAACCTATTACATGAATGTCATGAACACCGGCGTGGAATATTGGTTCCCGGTGT
ACGAGATGTTTAAACAGGCCTCCCATCAATTGGGATGTAAAACCGTTTACGGCGGCACGCCGGCCTACTATGTCAACCAA
CAGTTGTCCAGTTTCGAGCAGGTGCTGGCGCAAAAACTCGCCGGCATCTTTCTCCATCCCATAAACCCTGATCCCTTTAT
TGAACCGATCAATCGCGCCGCAGAGATGGGCATTCCGGTCGTCACCTTCGCCGCCGATTCCCCCAATAGCAAACGCGTTG
CCTATGTGACCTCGGACAACTTCCGCGAAGGCAAGCGGCCGTGGACGAAATGGGCAAGGTTATGCAGGGGAAAGGCGAGT
ATACCGTGCTGGAGAATCCGGGTCAGGATAACCACGATCGCCGCGTGA

Upstream 100 bases:

>100_bases
ATCGATGAAATAAATTTCAAAACCACCCCGGCTCGTTTCTCCGTGTTGCTGCTGTAACGGCTGAGCCAGGAATACCAGAC
GTTTTCCGGGGAAGATAATA

Downstream 100 bases:

>100_bases
TTGCCTTCATCAACGAGATGAAAACCGCTTTCTCGGACACCAAACTGGTGGCGCTGGTGGCGACCAACCAGGATCCGTCG
AAAGTCTATAACGCCGTATT

Product: putative sugar ABC transporter periplasmic component

Products: NA

Alternate protein names: Sugar ABC Transporter Periplasmic Component; Ribose ABC Transporter; Tat Pathway Signal Sequence Domain-Containing; ABC-Type Sugar Transport System Periplasmic Component

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MKKSYAVAACLLCTLTLAPAVKAADETPQFRCKPGETYYMNVMNTGVEYWFPVYEMFKQASHQLGCKTVYGGTPAYYVNQ
QLSSFEQVLAQKLAGIFLHPINPDPFIEPINRAAEMGIPVVTFAADSPNSKRVAYVTSDNFREGKRPWTKWARLCRGKAS
IPCWRIRVRITTIAA

Sequences:

>Translated_175_residues
MKKSYAVAACLLCTLTLAPAVKAADETPQFRCKPGETYYMNVMNTGVEYWFPVYEMFKQASHQLGCKTVYGGTPAYYVNQ
QLSSFEQVLAQKLAGIFLHPINPDPFIEPINRAAEMGIPVVTFAADSPNSKRVAYVTSDNFREGKRPWTKWARLCRGKAS
IPCWRIRVRITTIAA
>Mature_175_residues
MKKSYAVAACLLCTLTLAPAVKAADETPQFRCKPGETYYMNVMNTGVEYWFPVYEMFKQASHQLGCKTVYGGTPAYYVNQ
QLSSFEQVLAQKLAGIFLHPINPDPFIEPINRAAEMGIPVVTFAADSPNSKRVAYVTSDNFREGKRPWTKWARLCRGKAS
IPCWRIRVRITTIAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19665; Mature: 19665

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSYAVAACLLCTLTLAPAVKAADETPQFRCKPGETYYMNVMNTGVEYWFPVYEMFKQA
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCEEEEEEHHCCHHHHHHHHHHHHHH
SHQLGCKTVYGGTPAYYVNQQLSSFEQVLAQKLAGIFLHPINPDPFIEPINRAAEMGIPV
HHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHCCCCE
VTFAADSPNSKRVAYVTSDNFREGKRPWTKWARLCRGKASIPCWRIRVRITTIAA
EEEECCCCCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCEEEEEEEEEEECC
>Mature Secondary Structure
MKKSYAVAACLLCTLTLAPAVKAADETPQFRCKPGETYYMNVMNTGVEYWFPVYEMFKQA
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCEEEEEEHHCCHHHHHHHHHHHHHH
SHQLGCKTVYGGTPAYYVNQQLSSFEQVLAQKLAGIFLHPINPDPFIEPINRAAEMGIPV
HHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHCCCCE
VTFAADSPNSKRVAYVTSDNFREGKRPWTKWARLCRGKASIPCWRIRVRITTIAA
EEEECCCCCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCEEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA