| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is yjgA [C]
Identifier: 85058143
GI number: 85058143
Start: 292891
End: 293439
Strand: Reverse
Name: yjgA [C]
Synonym: SG0165
Alternate gene names: 85058143
Gene position: 293439-292891 (Counterclockwise)
Preceding gene: 85058147
Following gene: 85058140
Centisome position: 7.03
GC content: 55.37
Gene sequence:
>549_bases ATGAATAAACAGCCGGAAGAGTGGCAGGACCCACAGTCTTTGCAGCAGCAGGACGATGAGCAAGATGAAATAATCTGGGT CAGCAAGAGTGAAATCAAACGCGACGCCGAGACGCTAAAACAGTTAGGCGTTGAGCTGGTGTCACTCGGTAAAAATGCGC TGGAAAAAATCCCGCTGGACGATGACCTGCGCTGCGCCATCGCGCTGGCGCAGCGCATCAAGCGCGAAGGGCAGCGCCGG CAAATTCAGCTTATCGGGAAGATGCTGCGCGCCCGGGATCCGGAGCCTATCCAGCAGGCGCTGGATAAACTGAAGAATCG CCATAACCAGCAGATCACCTTGTTTCATAAGCTTGAAATACTACGCGACAAGCTGCTTGCGCAGGGCGACGACGCCATTG CACAAGTGCTAGAACATTATCCGCAGGCCGACCGCCAGCAGTTACGGGCGCTGGTACGCAATGCCCAGAAAGAGAAGGCG GCCAAAAAACCGCCAAAAACCGCGCGCCAACTTTACCAATACTTGCACACCCTGTCCGAGGCGGACTAA
Upstream 100 bases:
>100_bases ACAGGCAGAGAAAATTGGCGTTTAAACGTCGCACGGTGAAATAATGCCGTTGAGAATCCGAGGCAACCTGCTAGGATGAG CCTCTTTTTGAGGAACACCT
Downstream 100 bases:
>100_bases CGCCGCGTCCCTTGGCGTCAGGCGCAGCTGCCGTCTGTCAGCACATTGAGATGCAGAAACTCAATTGCCACCGGCAACGG CAAATGGCTCATTACCGTCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 182; Mature: 182
Protein sequence:
>182_residues MNKQPEEWQDPQSLQQQDDEQDEIIWVSKSEIKRDAETLKQLGVELVSLGKNALEKIPLDDDLRCAIALAQRIKREGQRR QIQLIGKMLRARDPEPIQQALDKLKNRHNQQITLFHKLEILRDKLLAQGDDAIAQVLEHYPQADRQQLRALVRNAQKEKA AKKPPKTARQLYQYLHTLSEAD
Sequences:
>Translated_182_residues MNKQPEEWQDPQSLQQQDDEQDEIIWVSKSEIKRDAETLKQLGVELVSLGKNALEKIPLDDDLRCAIALAQRIKREGQRR QIQLIGKMLRARDPEPIQQALDKLKNRHNQQITLFHKLEILRDKLLAQGDDAIAQVLEHYPQADRQQLRALVRNAQKEKA AKKPPKTARQLYQYLHTLSEAD >Mature_182_residues MNKQPEEWQDPQSLQQQDDEQDEIIWVSKSEIKRDAETLKQLGVELVSLGKNALEKIPLDDDLRCAIALAQRIKREGQRR QIQLIGKMLRARDPEPIQQALDKLKNRHNQQITLFHKLEILRDKLLAQGDDAIAQVLEHYPQADRQQLRALVRNAQKEKA AKKPPKTARQLYQYLHTLSEAD
Specific function: Unknown
COG id: COG3028
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0307 family
Homologues:
Organism=Escherichia coli, GI1790681, Length=180, Percent_Identity=72.2222222222222, Blast_Score=243, Evalue=6e-66,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y165_SODGM (Q2NWN5)
Other databases:
- EMBL: AP008232 - RefSeq: YP_453845.1 - ProteinModelPortal: Q2NWN5 - SMR: Q2NWN5 - STRING: Q2NWN5 - GeneID: 3868492 - GenomeReviews: AP008232_GR - KEGG: sgl:SG0165 - NMPDR: fig|343509.6.peg.350 - eggNOG: COG3028 - HOGENOM: HBG677712 - OMA: KAPWEEE - PhylomeDB: Q2NWN5 - ProtClustDB: PRK05255 - BioCyc: SGLO343509:SG0165-MONOMER - HAMAP: MF_00765 - InterPro: IPR023153 - InterPro: IPR006839 - PIRSF: PIRSF016183
Pfam domain/function: PF04751 DUF615
EC number: NA
Molecular weight: Translated: 21166; Mature: 21166
Theoretical pI: Translated: 9.03; Mature: 9.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKQPEEWQDPQSLQQQDDEQDEIIWVSKSEIKRDAETLKQLGVELVSLGKNALEKIPLD CCCCCCCCCCHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DDLRCAIALAQRIKREGQRRQIQLIGKMLRARDPEPIQQALDKLKNRHNQQITLFHKLEI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHH LRDKLLAQGDDAIAQVLEHYPQADRQQLRALVRNAQKEKAAKKPPKTARQLYQYLHTLSE HHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHC AD CC >Mature Secondary Structure MNKQPEEWQDPQSLQQQDDEQDEIIWVSKSEIKRDAETLKQLGVELVSLGKNALEKIPLD CCCCCCCCCCHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DDLRCAIALAQRIKREGQRRQIQLIGKMLRARDPEPIQQALDKLKNRHNQQITLFHKLEI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHH LRDKLLAQGDDAIAQVLEHYPQADRQQLRALVRNAQKEKAAKKPPKTARQLYQYLHTLSE HHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHC AD CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA