| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is 85058147
Identifier: 85058147
GI number: 85058147
Start: 303727
End: 304383
Strand: Reverse
Name: 85058147
Synonym: SG0169
Alternate gene names: NA
Gene position: 304383-303727 (Counterclockwise)
Preceding gene: 85058148
Following gene: 85058143
Centisome position: 7.3
GC content: 53.58
Gene sequence:
>657_bases TTGCTAACAATGGCAACGCTGTGGTTAATGACGCATGAAACGCTCAACCGGCGCGCGCCGCTGCGATTACTGACGACGTT TGATCATTATTATCGCCTGCTAATGCAACGCCACTTTGTACTGCCGGCGCTATCCATCGGTAGCGGCGTGGGTGGAATTT ATACGCTTTCCATTGCGCTGCCGTTTGTCTTGATCTATCGGCTCAGACTTTCCACTTTCAGCTTCGGATTAGTGATGATG TTCCAAACGGGCTCGTACATTACCGGTTCTCTGCTCGCCAACCGTTTGTTACGACTCCATTCATTGACTTCTATTATCCG GCTAGGGGTATCGGTCATTGCGCTCGGCGGGATACTGTTTTTACTACTGCCTCACCTGTGCGTCCCCGCGGTCTGGGTAT GGATAAGTCCCGCGGCGATTTGGGTCTTTGGCAACGCACTGGTGGCACCGGGTCTAACCAGCTTTGCGATGGAAAGGCAG GCGGAGAAGGCAGGCAGTGCCTCGGCGCTGCTGGGATTTATACAAATTGGTATTGGTTTTCTCGACAATACGCTGCTGGG CAGCTTTTATACCGATGTTGCGCAGGGAACAGCTTGGTTAGTTCCCATGTCCGCGTTCATCGCCGTGAGCTGCGGGTTGG CCAGTAAACGCGCGTGA
Upstream 100 bases:
>100_bases CCTACTTGTAAGCATACCGCTGCTTTCGCCGGCATTGGGCGCAGTGACAATCATGTTCACCACCTGGCGCGCGGTTTTTG CCATCATGCTGGGTTATGCC
Downstream 100 bases:
>100_bases TGTTTACTATTGGCCTTGACCCAACATCTTGCGCCACCGATGCCTTAAGGAACAGAACTCAGACATCCTTAGTCGAAGCT GTTTAAAATCAACAATGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: MFS Permease; Drug Resistance Transporter; Bcr/CflA Subfamily Drug Resistance Transporter
Number of amino acids: Translated: 218; Mature: 218
Protein sequence:
>218_residues MLTMATLWLMTHETLNRRAPLRLLTTFDHYYRLLMQRHFVLPALSIGSGVGGIYTLSIALPFVLIYRLRLSTFSFGLVMM FQTGSYITGSLLANRLLRLHSLTSIIRLGVSVIALGGILFLLLPHLCVPAVWVWISPAAIWVFGNALVAPGLTSFAMERQ AEKAGSASALLGFIQIGIGFLDNTLLGSFYTDVAQGTAWLVPMSAFIAVSCGLASKRA
Sequences:
>Translated_218_residues MLTMATLWLMTHETLNRRAPLRLLTTFDHYYRLLMQRHFVLPALSIGSGVGGIYTLSIALPFVLIYRLRLSTFSFGLVMM FQTGSYITGSLLANRLLRLHSLTSIIRLGVSVIALGGILFLLLPHLCVPAVWVWISPAAIWVFGNALVAPGLTSFAMERQ AEKAGSASALLGFIQIGIGFLDNTLLGSFYTDVAQGTAWLVPMSAFIAVSCGLASKRA >Mature_218_residues MLTMATLWLMTHETLNRRAPLRLLTTFDHYYRLLMQRHFVLPALSIGSGVGGIYTLSIALPFVLIYRLRLSTFSFGLVMM FQTGSYITGSLLANRLLRLHSLTSIIRLGVSVIALGGILFLLLPHLCVPAVWVWISPAAIWVFGNALVAPGLTSFAMERQ AEKAGSASALLGFIQIGIGFLDNTLLGSFYTDVAQGTAWLVPMSAFIAVSCGLASKRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23751; Mature: 23751
Theoretical pI: Translated: 10.49; Mature: 10.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTMATLWLMTHETLNRRAPLRLLTTFDHYYRLLMQRHFVLPALSIGSGVGGIYTLSIAL CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH PFVLIYRLRLSTFSFGLVMMFQTGSYITGSLLANRLLRLHSLTSIIRLGVSVIALGGILF HHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLLPHLCVPAVWVWISPAAIWVFGNALVAPGLTSFAMERQAEKAGSASALLGFIQIGIGF HHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHH LDNTLLGSFYTDVAQGTAWLVPMSAFIAVSCGLASKRA HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MLTMATLWLMTHETLNRRAPLRLLTTFDHYYRLLMQRHFVLPALSIGSGVGGIYTLSIAL CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH PFVLIYRLRLSTFSFGLVMMFQTGSYITGSLLANRLLRLHSLTSIIRLGVSVIALGGILF HHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLLPHLCVPAVWVWISPAAIWVFGNALVAPGLTSFAMERQAEKAGSASALLGFIQIGIGF HHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHH LDNTLLGSFYTDVAQGTAWLVPMSAFIAVSCGLASKRA HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA