Definition Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome.
Accession NC_007705
Length 4,940,217

Click here to switch to the map view.

The map label for this gene is 84625888

Identifier: 84625888

GI number: 84625888

Start: 4783346

End: 4783942

Strand: Reverse

Name: 84625888

Synonym: XOO_4231

Alternate gene names: NA

Gene position: 4783942-4783346 (Counterclockwise)

Preceding gene: 84625889

Following gene: 84625885

Centisome position: 96.84

GC content: 65.16

Gene sequence:

>597_bases
ATGTCGCGGCGCTGGCATCGGCCGCAGTCACCGCCTGGCACGCCGGAAGTCGCCAGGATCAAGGCCGGCGACCTAGTGCT
CTGTCTGGGAACCGTCGGCGTCTCGATGGCCGCGCTCGAACTCGCCAAGCGCCACGGTGCCCATGTCGCCATCACCTCAT
CCAGCGACGAGAAGCTTGAACTCGCGCGCCGCCTGGGCGCCGACATCACCGTCACCTATCGCACCGATCCCGACTGGGCC
GATGCCGTGACGCAGCTGTCCGGCGGCGGCGCGGACGTCATCATCGAGACCGGCGGGCAGGACACCCTGGGACAGTCGAT
CAAGGTGGCAGCTGCCAACGCGACCATCGTGGTGATCGGCGTCACTCCCGGCACCTCTTCGCCGATTCCCGACTATGTGT
CGTTGATCCGCAAGAACGCAACCATTCGCGGGATCGCCAATGCAAGCCGGGCGATGTTCGTGGACCTGCTGCGTGCGATC
GAGCAGCACCGCATCAAGACCCTGCACAACAACACGTTCCGGTTCGATGAGGCGCCCCAGGCCTTTGATTACGTCGCCAG
GGCGCAACACGTGGGCAAGGTCCTGATCCAGTTCTGA

Upstream 100 bases:

>100_bases
GCCCACGATCTGGGCGTGACCCACGATGGCTGGCTGGCGGAAACGGTGGTGCTGCCTGCATCCGCGCTGATCAAGGTGCC
CGTGTCGTTGGACGACCAAG

Downstream 100 bases:

>100_bases
CGCGCCGCAGTGGCGTCGCAGCGCGCGGCGCCGCTGACAGGCCCAATGCTGGGCTGGCGCGGGGCTAGCTGCTGGCTTCG
AGCATCTGGTCGAGCACGTA

Product: hypothetical protein

Products: NA

Alternate protein names: Quinone Oxidoreductase; NAD(P)H Quinone Oxidoreductase PIG3 Family; Oxidoreductase; Alcohol Dehydrogenase Zinc-Containing; Zinc-Containing Alcohol Dehydrogenase Superfamily Protein; NADPHQuinone Reductase; Alcohol Dehydrogenase Protein; Zinc-Containing Alcohol Dehydrogenase; NADPH Quinone Oxidoreductase; PIG3 Family NAD(P)H Quinone Oxidoreductase; Zn-Dependent Alcohol Dehydrogenase; Alcohol Dehydrogenase Groes Domain Protein; Oxidoreductase Protein; NADPH2Quinone Reductase; Zinc-Containing Alcohol Dehydrogenase Superfamily; Class III Alcohol Dehydrogenase; NADPHQuinone Reductase Zn-Dependent Oxidoreductase; Alcohol Dehydrogenase Zn-Containing; Transcriptional Regulator HxlR Family; Oxydoreductase Protein Zinc-Containing; NAD(P)H Quinone Oxidoreductase; Alcohol Dehydrogenase YogA; Zinc-Dependent NADPHQuinone Oxidoreductase; Alcohol Dehydrogenase And Quinone Oxidoreductase; Alcohol Dehydrogenase Class III; Alcohol Dehydrogenase Superfamily Zinc-Containing

Number of amino acids: Translated: 198; Mature: 197

Protein sequence:

>198_residues
MSRRWHRPQSPPGTPEVARIKAGDLVLCLGTVGVSMAALELAKRHGAHVAITSSSDEKLELARRLGADITVTYRTDPDWA
DAVTQLSGGGADVIIETGGQDTLGQSIKVAAANATIVVIGVTPGTSSPIPDYVSLIRKNATIRGIANASRAMFVDLLRAI
EQHRIKTLHNNTFRFDEAPQAFDYVARAQHVGKVLIQF

Sequences:

>Translated_198_residues
MSRRWHRPQSPPGTPEVARIKAGDLVLCLGTVGVSMAALELAKRHGAHVAITSSSDEKLELARRLGADITVTYRTDPDWA
DAVTQLSGGGADVIIETGGQDTLGQSIKVAAANATIVVIGVTPGTSSPIPDYVSLIRKNATIRGIANASRAMFVDLLRAI
EQHRIKTLHNNTFRFDEAPQAFDYVARAQHVGKVLIQF
>Mature_197_residues
SRRWHRPQSPPGTPEVARIKAGDLVLCLGTVGVSMAALELAKRHGAHVAITSSSDEKLELARRLGADITVTYRTDPDWAD
AVTQLSGGGADVIIETGGQDTLGQSIKVAAANATIVVIGVTPGTSSPIPDYVSLIRKNATIRGIANASRAMFVDLLRAIE
QHRIKTLHNNTFRFDEAPQAFDYVARAQHVGKVLIQF

Specific function: Unknown

COG id: COG0604

COG function: function code CR; NADPH:quinone reductase and related Zn-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21262; Mature: 21130

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRRWHRPQSPPGTPEVARIKAGDLVLCLGTVGVSMAALELAKRHGAHVAITSSSDEKLE
CCCCCCCCCCCCCCCCEEEEECCCEEEEHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHH
LARRLGADITVTYRTDPDWADAVTQLSGGGADVIIETGGQDTLGQSIKVAAANATIVVIG
HHHHCCCCEEEEEECCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCEEEEECCCEEEEEE
VTPGTSSPIPDYVSLIRKNATIRGIANASRAMFVDLLRAIEQHRIKTLHNNTFRFDEAPQ
ECCCCCCCCHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCH
AFDYVARAQHVGKVLIQF
HHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SRRWHRPQSPPGTPEVARIKAGDLVLCLGTVGVSMAALELAKRHGAHVAITSSSDEKLE
CCCCCCCCCCCCCCCEEEEECCCEEEEHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHH
LARRLGADITVTYRTDPDWADAVTQLSGGGADVIIETGGQDTLGQSIKVAAANATIVVIG
HHHHCCCCEEEEEECCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCEEEEECCCEEEEEE
VTPGTSSPIPDYVSLIRKNATIRGIANASRAMFVDLLRAIEQHRIKTLHNNTFRFDEAPQ
ECCCCCCCCHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCH
AFDYVARAQHVGKVLIQF
HHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA