| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84625888
Identifier: 84625888
GI number: 84625888
Start: 4783346
End: 4783942
Strand: Reverse
Name: 84625888
Synonym: XOO_4231
Alternate gene names: NA
Gene position: 4783942-4783346 (Counterclockwise)
Preceding gene: 84625889
Following gene: 84625885
Centisome position: 96.84
GC content: 65.16
Gene sequence:
>597_bases ATGTCGCGGCGCTGGCATCGGCCGCAGTCACCGCCTGGCACGCCGGAAGTCGCCAGGATCAAGGCCGGCGACCTAGTGCT CTGTCTGGGAACCGTCGGCGTCTCGATGGCCGCGCTCGAACTCGCCAAGCGCCACGGTGCCCATGTCGCCATCACCTCAT CCAGCGACGAGAAGCTTGAACTCGCGCGCCGCCTGGGCGCCGACATCACCGTCACCTATCGCACCGATCCCGACTGGGCC GATGCCGTGACGCAGCTGTCCGGCGGCGGCGCGGACGTCATCATCGAGACCGGCGGGCAGGACACCCTGGGACAGTCGAT CAAGGTGGCAGCTGCCAACGCGACCATCGTGGTGATCGGCGTCACTCCCGGCACCTCTTCGCCGATTCCCGACTATGTGT CGTTGATCCGCAAGAACGCAACCATTCGCGGGATCGCCAATGCAAGCCGGGCGATGTTCGTGGACCTGCTGCGTGCGATC GAGCAGCACCGCATCAAGACCCTGCACAACAACACGTTCCGGTTCGATGAGGCGCCCCAGGCCTTTGATTACGTCGCCAG GGCGCAACACGTGGGCAAGGTCCTGATCCAGTTCTGA
Upstream 100 bases:
>100_bases GCCCACGATCTGGGCGTGACCCACGATGGCTGGCTGGCGGAAACGGTGGTGCTGCCTGCATCCGCGCTGATCAAGGTGCC CGTGTCGTTGGACGACCAAG
Downstream 100 bases:
>100_bases CGCGCCGCAGTGGCGTCGCAGCGCGCGGCGCCGCTGACAGGCCCAATGCTGGGCTGGCGCGGGGCTAGCTGCTGGCTTCG AGCATCTGGTCGAGCACGTA
Product: hypothetical protein
Products: NA
Alternate protein names: Quinone Oxidoreductase; NAD(P)H Quinone Oxidoreductase PIG3 Family; Oxidoreductase; Alcohol Dehydrogenase Zinc-Containing; Zinc-Containing Alcohol Dehydrogenase Superfamily Protein; NADPHQuinone Reductase; Alcohol Dehydrogenase Protein; Zinc-Containing Alcohol Dehydrogenase; NADPH Quinone Oxidoreductase; PIG3 Family NAD(P)H Quinone Oxidoreductase; Zn-Dependent Alcohol Dehydrogenase; Alcohol Dehydrogenase Groes Domain Protein; Oxidoreductase Protein; NADPH2Quinone Reductase; Zinc-Containing Alcohol Dehydrogenase Superfamily; Class III Alcohol Dehydrogenase; NADPHQuinone Reductase Zn-Dependent Oxidoreductase; Alcohol Dehydrogenase Zn-Containing; Transcriptional Regulator HxlR Family; Oxydoreductase Protein Zinc-Containing; NAD(P)H Quinone Oxidoreductase; Alcohol Dehydrogenase YogA; Zinc-Dependent NADPHQuinone Oxidoreductase; Alcohol Dehydrogenase And Quinone Oxidoreductase; Alcohol Dehydrogenase Class III; Alcohol Dehydrogenase Superfamily Zinc-Containing
Number of amino acids: Translated: 198; Mature: 197
Protein sequence:
>198_residues MSRRWHRPQSPPGTPEVARIKAGDLVLCLGTVGVSMAALELAKRHGAHVAITSSSDEKLELARRLGADITVTYRTDPDWA DAVTQLSGGGADVIIETGGQDTLGQSIKVAAANATIVVIGVTPGTSSPIPDYVSLIRKNATIRGIANASRAMFVDLLRAI EQHRIKTLHNNTFRFDEAPQAFDYVARAQHVGKVLIQF
Sequences:
>Translated_198_residues MSRRWHRPQSPPGTPEVARIKAGDLVLCLGTVGVSMAALELAKRHGAHVAITSSSDEKLELARRLGADITVTYRTDPDWA DAVTQLSGGGADVIIETGGQDTLGQSIKVAAANATIVVIGVTPGTSSPIPDYVSLIRKNATIRGIANASRAMFVDLLRAI EQHRIKTLHNNTFRFDEAPQAFDYVARAQHVGKVLIQF >Mature_197_residues SRRWHRPQSPPGTPEVARIKAGDLVLCLGTVGVSMAALELAKRHGAHVAITSSSDEKLELARRLGADITVTYRTDPDWAD AVTQLSGGGADVIIETGGQDTLGQSIKVAAANATIVVIGVTPGTSSPIPDYVSLIRKNATIRGIANASRAMFVDLLRAIE QHRIKTLHNNTFRFDEAPQAFDYVARAQHVGKVLIQF
Specific function: Unknown
COG id: COG0604
COG function: function code CR; NADPH:quinone reductase and related Zn-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21262; Mature: 21130
Theoretical pI: Translated: 9.61; Mature: 9.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRRWHRPQSPPGTPEVARIKAGDLVLCLGTVGVSMAALELAKRHGAHVAITSSSDEKLE CCCCCCCCCCCCCCCCEEEEECCCEEEEHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHH LARRLGADITVTYRTDPDWADAVTQLSGGGADVIIETGGQDTLGQSIKVAAANATIVVIG HHHHCCCCEEEEEECCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCEEEEECCCEEEEEE VTPGTSSPIPDYVSLIRKNATIRGIANASRAMFVDLLRAIEQHRIKTLHNNTFRFDEAPQ ECCCCCCCCHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCH AFDYVARAQHVGKVLIQF HHHHHHHHHHHHHHHHCC >Mature Secondary Structure SRRWHRPQSPPGTPEVARIKAGDLVLCLGTVGVSMAALELAKRHGAHVAITSSSDEKLE CCCCCCCCCCCCCCCEEEEECCCEEEEHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHH LARRLGADITVTYRTDPDWADAVTQLSGGGADVIIETGGQDTLGQSIKVAAANATIVVIG HHHHCCCCEEEEEECCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCEEEEECCCEEEEEE VTPGTSSPIPDYVSLIRKNATIRGIANASRAMFVDLLRAIEQHRIKTLHNNTFRFDEAPQ ECCCCCCCCHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCH AFDYVARAQHVGKVLIQF HHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA