| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is sbp [H]
Identifier: 84625142
GI number: 84625142
Start: 3950531
End: 3951628
Strand: Reverse
Name: sbp [H]
Synonym: XOO_3485
Alternate gene names: 84625142
Gene position: 3951628-3950531 (Counterclockwise)
Preceding gene: 84625145
Following gene: 84625141
Centisome position: 79.99
GC content: 63.66
Gene sequence:
>1098_bases ATGTCATTTCACCGCCTGCGTGACGCTGCGCAGCATGGCATGCTTGCTGTTCAGCTGTGCTCAACCGGCCAGGAGATTGT CGTGACATACCCCCGTATCCGTCTTGCTTGCCTTCTTTGCACCCTGCTGGTCCTGGCCGGCCCGGCAGGCGCACGCGAGA TCGGGCTGCTTAACGTGAGCTACGACCCCACCCGCGAGTTCTACCGCGACTACAACACCGCTTTTGCCGCGCACTGGAAA CAGCAGCACCCGCAGGACGCCGTCACCGTGGAAACCTCGCACGGCGGCTCGGGCAAGCAGGCGCGCGCGGTGATCGATGG CATCGAGGCCGACGTGGTGACGTTGGCGCTGGCCTACGACGTGGATGCCATCGCGCAAAAGGCCAAGCTGATCGATACCG ATTGGGAAGCGCGCCTGCCCGACAACAGTGCGCCGTACACCTCGACCATTGTGTTTCTGGTGCGCAAGGGCAACCCCAAG AACATCCATGACTGGCCGGACCTGCTGCGCTCGGGCGTGTCGGTGGTGACCCCGAATCCGAAGACCTCCGGTGGCGCGCG CTGGAACTATCTGGCCGCCTGGGCGTACGCCGACCATATCTTCAAGGGCGACCGCGAGCGCACCCTGCGCTACATGCAGG CCTTGTTCCGCAATGTGCCGGTGCTGGATACCGGCGCGCGCGGCGCAACCACCACGTTCGTGCAGCGTGGGATCGGTGAT GTGCTGCTGGCCTGGGAAAACGAGGCGCTGCTGGCGCGCGAGGAATTGGGCAAGGACAAGTTCGAGATCGTGGTACCGAA GTTGTCGATCCTGGCCGAGCCATCGGTGGCGCTGGTCGACAAGAACGTCGACAAGCATGGCACCCGCGAGGTGGCCGAAG CCTACCTGCGCTATCTGTACGCGCCGGAAGGCCAGAAGCTGGCAGCCAAGCATTTCTATCGCCCGCGGCATCCGGAATTT GCCGACCCCGCCGACATGGCGCGTTTCCCGGATATCCAGCTGGTGACCATCCAGCAGGCGTTTGGCTCTTGGGACAAGGC GCAACAGGAGCACTTCGCCGACGGTGGTGTGTTCGACCAGATCCAGGCCAACAAGTAG
Upstream 100 bases:
>100_bases CGGTGGTCATGGCGGTCGCAGTGGCAGAAAGAAGCGCAATGTTAACGATCACGGTGGCATACCACTACGTCATACAAAAT CGGCATAAGCGGCGGCGCTG
Downstream 100 bases:
>100_bases GCGATGGCGATGTCGGTTGCACCCCACTCAGCGCCGTCATCGCGCCGACGCGTGATGCCGGGGCTGGGCCTGAGTTTGGG TATCACCCTGACCTGGCTTG
Product: ABC transporter sulfate binding protein
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: Sulfate starvation-induced protein 2; SSI2 [H]
Number of amino acids: Translated: 365; Mature: 364
Protein sequence:
>365_residues MSFHRLRDAAQHGMLAVQLCSTGQEIVVTYPRIRLACLLCTLLVLAGPAGAREIGLLNVSYDPTREFYRDYNTAFAAHWK QQHPQDAVTVETSHGGSGKQARAVIDGIEADVVTLALAYDVDAIAQKAKLIDTDWEARLPDNSAPYTSTIVFLVRKGNPK NIHDWPDLLRSGVSVVTPNPKTSGGARWNYLAAWAYADHIFKGDRERTLRYMQALFRNVPVLDTGARGATTTFVQRGIGD VLLAWENEALLAREELGKDKFEIVVPKLSILAEPSVALVDKNVDKHGTREVAEAYLRYLYAPEGQKLAAKHFYRPRHPEF ADPADMARFPDIQLVTIQQAFGSWDKAQQEHFADGGVFDQIQANK
Sequences:
>Translated_365_residues MSFHRLRDAAQHGMLAVQLCSTGQEIVVTYPRIRLACLLCTLLVLAGPAGAREIGLLNVSYDPTREFYRDYNTAFAAHWK QQHPQDAVTVETSHGGSGKQARAVIDGIEADVVTLALAYDVDAIAQKAKLIDTDWEARLPDNSAPYTSTIVFLVRKGNPK NIHDWPDLLRSGVSVVTPNPKTSGGARWNYLAAWAYADHIFKGDRERTLRYMQALFRNVPVLDTGARGATTTFVQRGIGD VLLAWENEALLAREELGKDKFEIVVPKLSILAEPSVALVDKNVDKHGTREVAEAYLRYLYAPEGQKLAAKHFYRPRHPEF ADPADMARFPDIQLVTIQQAFGSWDKAQQEHFADGGVFDQIQANK >Mature_364_residues SFHRLRDAAQHGMLAVQLCSTGQEIVVTYPRIRLACLLCTLLVLAGPAGAREIGLLNVSYDPTREFYRDYNTAFAAHWKQ QHPQDAVTVETSHGGSGKQARAVIDGIEADVVTLALAYDVDAIAQKAKLIDTDWEARLPDNSAPYTSTIVFLVRKGNPKN IHDWPDLLRSGVSVVTPNPKTSGGARWNYLAAWAYADHIFKGDRERTLRYMQALFRNVPVLDTGARGATTTFVQRGIGDV LLAWENEALLAREELGKDKFEIVVPKLSILAEPSVALVDKNVDKHGTREVAEAYLRYLYAPEGQKLAAKHFYRPRHPEFA DPADMARFPDIQLVTIQQAFGSWDKAQQEHFADGGVFDQIQANK
Specific function: This protein specifically binds sulfate and is involved in its transmembrane transport [H]
COG id: COG1613
COG function: function code P; ABC-type sulfate transport system, periplasmic component
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the prokaryotic sulfate-binding protein family [H]
Homologues:
Organism=Escherichia coli, GI1790351, Length=322, Percent_Identity=67.3913043478261, Blast_Score=448, Evalue=1e-127, Organism=Escherichia coli, GI1788765, Length=308, Percent_Identity=48.0519480519481, Blast_Score=310, Evalue=1e-85,
Paralogues:
None
Copy number: 1240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006059 - InterPro: IPR000957 - InterPro: IPR005669 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 40626; Mature: 40495
Theoretical pI: Translated: 6.91; Mature: 6.91
Prosite motif: PS00757 PROK_SULFATE_BIND_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFHRLRDAAQHGMLAVQLCSTGQEIVVTYPRIRLACLLCTLLVLAGPAGAREIGLLNVS CCHHHHHHHHHCCEEEEEECCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCCEEEEEECC YDPTREFYRDYNTAFAAHWKQQHPQDAVTVETSHGGSGKQARAVIDGIEADVVTLALAYD CCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHCCCHHHEEEHHHHC VDAIAQKAKLIDTDWEARLPDNSAPYTSTIVFLVRKGNPKNIHDWPDLLRSGVSVVTPNP HHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHCCCEEECCCC KTSGGARWNYLAAWAYADHIFKGDRERTLRYMQALFRNVPVLDTGARGATTTFVQRGIGD CCCCCCCCHHEEHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHCCCC VLLAWENEALLAREELGKDKFEIVVPKLSILAEPSVALVDKNVDKHGTREVAEAYLRYLY EEEEECCCHHHHHHHCCCCCEEEEECCHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHC APEGQKLAAKHFYRPRHPEFADPADMARFPDIQLVTIQQAFGSWDKAQQEHFADGGVFDQ CCCCCHHHHHHCCCCCCCCCCCCHHHHHCCCEEEEEEHHHHCCHHHHHHHHCCCCCCCCC IQANK CCCCC >Mature Secondary Structure SFHRLRDAAQHGMLAVQLCSTGQEIVVTYPRIRLACLLCTLLVLAGPAGAREIGLLNVS CHHHHHHHHHCCEEEEEECCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCCEEEEEECC YDPTREFYRDYNTAFAAHWKQQHPQDAVTVETSHGGSGKQARAVIDGIEADVVTLALAYD CCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHCCCHHHEEEHHHHC VDAIAQKAKLIDTDWEARLPDNSAPYTSTIVFLVRKGNPKNIHDWPDLLRSGVSVVTPNP HHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHCCCEEECCCC KTSGGARWNYLAAWAYADHIFKGDRERTLRYMQALFRNVPVLDTGARGATTTFVQRGIGD CCCCCCCCHHEEHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHCCCC VLLAWENEALLAREELGKDKFEIVVPKLSILAEPSVALVDKNVDKHGTREVAEAYLRYLY EEEEECCCHHHHHHHCCCCCEEEEECCHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHC APEGQKLAAKHFYRPRHPEFADPADMARFPDIQLVTIQQAFGSWDKAQQEHFADGGVFDQ CCCCCHHHHHHCCCCCCCCCCCCHHHHHCCCEEEEEEHHHHCCHHHHHHHHCCCCCCCCC IQANK CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3158524; 2002055; 8346018; 9278503; 9298646; 8774726 [H]