| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is folC [H]
Identifier: 84625132
GI number: 84625132
Start: 3935299
End: 3936597
Strand: Reverse
Name: folC [H]
Synonym: XOO_3475
Alternate gene names: 84625132
Gene position: 3936597-3935299 (Counterclockwise)
Preceding gene: 84625133
Following gene: 84625131
Centisome position: 79.68
GC content: 67.28
Gene sequence:
>1299_bases ATGACCACCCCCACCACACTCTCCGAGTGGCTCGCCTACATCGAGCAGCAACACCCCAGCAGTATCGCGATGGGATTGGA GCGCGTGCGCGAGGTGGCTGCGCGCCTGCAGATCGCAGCGCCAGCCAAGCATGCCATCGTCGTGGGCGGGACCAATGGCA AGGGCTCGACCGTGGCCTTTATCGAGGCGATCGGGCGTGCTGCCGGCTGGAAGATCGGTGCCTACACCTCGCCGCATCTG CTGCGCTACAACGAGCGCGTGCGTATCGACGGCGAGGAGGCCAGCGACGCGCAGCTGGTCGATGCGTTTGCTGCGGTAGA GGCAGCGCGCGGCGACACCGCGCTGACCTATTTCGAATTCGGCACGTTGGCGGCCTTGTGGCTGTTCCAGAGCGCCGCGC TGGATCTGACGGTGCTGGAAATCGGCCTGGGCGGGCGCCTGGATGCGGTCAACATCGTCGATGCGGATGTGGCGGTGATC ACCACCGTCGACATCGACCATACCGATTGGCTGGGCGAAGACCGCGAGGCCATCGGCACCGAGAAGGCCGGCATCATGCG CGCCTGGAAGCCGGTGGTGCTGGGCGAGATCGACCCGCCATCCAGCGTGTTGCGGCGCGCCTACCAGCTGGGTGCCAATG CGATCCGTGCCGGCAGCGATTATTTCTTCGAGCCGATTGAGGTGCAGCACCCCGAAAACCCGCAATCCGACGCGCCGCAA TGGCGCTGGCGCGATGTGGCAGTGACATTGGAATTGCCGATGCCGGCATTGCACGCGCCGGTACAGCTGGCCAACGCAGC CGCTGCGATCGCCGCATTGCAGGCGTTGCCGGTGGAGGTGCCCGCTGCAGCTTGGGTGCAGGGCATCGGCAACGCGCAAG TGGCCGGGCGATTGCAGCGCCTTGCGGTCGATGGCCTTCAGGTGTTGCTGGATGTCGGCCACAACCCACAGGCCGCACGC GCGCTGGCCGCCGCGCTCGGTGCGCAGGCGCACGCCGGCAGCACCTACGCGATCTACGCTGCTCTTGCCGACAAGGATGT CGTGGGCGTGGTGGAGGCAGTCGCTGCGCAAATCGACCACTGGGCATTGGCGGGGCTGGAGGGCGCGCGTGGACAATCGG CGCAGGCGCTGCACGCACGCCTGCAAGGGACTGCCGCCGCGCAGGCGCTGTGTCACCGCGACGTTGCCAGCGCAGTGGAG GCGGTCCTGGCCACAGCCAGCCCCGGCGACCGCGTGCTGGTGTTCGGCTCGTTTCACACCGTGGCCGACGCGCTTAGCGC ACTTCATTCAGCCTGTTGA
Upstream 100 bases:
>100_bases CGCCATCTGCCCAGGCAATGCATCCAGTGTTGCGACCGTTGGTAGGCCACGCTGGCGTCACGCGCGCGATAATCTCGCTC GCACGGCATCAGGTAACCCC
Downstream 100 bases:
>100_bases GGTCGTCGAGGTGGCGCCGGCCTTATAATCGCCGCGGCACCCCGCCACGCCGCCTCTCGTCTCTTCCGTGGATACTGCTC TGAAACAGCGACTGATTGGC
Product: folylpolyglutamate synthase
Products: NA
Alternate protein names: Folylpoly-gamma-glutamate synthetase; FPGS; Tetrahydrofolylpolyglutamate synthase; Tetrahydrofolate synthase [H]
Number of amino acids: Translated: 432; Mature: 431
Protein sequence:
>432_residues MTTPTTLSEWLAYIEQQHPSSIAMGLERVREVAARLQIAAPAKHAIVVGGTNGKGSTVAFIEAIGRAAGWKIGAYTSPHL LRYNERVRIDGEEASDAQLVDAFAAVEAARGDTALTYFEFGTLAALWLFQSAALDLTVLEIGLGGRLDAVNIVDADVAVI TTVDIDHTDWLGEDREAIGTEKAGIMRAWKPVVLGEIDPPSSVLRRAYQLGANAIRAGSDYFFEPIEVQHPENPQSDAPQ WRWRDVAVTLELPMPALHAPVQLANAAAAIAALQALPVEVPAAAWVQGIGNAQVAGRLQRLAVDGLQVLLDVGHNPQAAR ALAAALGAQAHAGSTYAIYAALADKDVVGVVEAVAAQIDHWALAGLEGARGQSAQALHARLQGTAAAQALCHRDVASAVE AVLATASPGDRVLVFGSFHTVADALSALHSAC
Sequences:
>Translated_432_residues MTTPTTLSEWLAYIEQQHPSSIAMGLERVREVAARLQIAAPAKHAIVVGGTNGKGSTVAFIEAIGRAAGWKIGAYTSPHL LRYNERVRIDGEEASDAQLVDAFAAVEAARGDTALTYFEFGTLAALWLFQSAALDLTVLEIGLGGRLDAVNIVDADVAVI TTVDIDHTDWLGEDREAIGTEKAGIMRAWKPVVLGEIDPPSSVLRRAYQLGANAIRAGSDYFFEPIEVQHPENPQSDAPQ WRWRDVAVTLELPMPALHAPVQLANAAAAIAALQALPVEVPAAAWVQGIGNAQVAGRLQRLAVDGLQVLLDVGHNPQAAR ALAAALGAQAHAGSTYAIYAALADKDVVGVVEAVAAQIDHWALAGLEGARGQSAQALHARLQGTAAAQALCHRDVASAVE AVLATASPGDRVLVFGSFHTVADALSALHSAC >Mature_431_residues TTPTTLSEWLAYIEQQHPSSIAMGLERVREVAARLQIAAPAKHAIVVGGTNGKGSTVAFIEAIGRAAGWKIGAYTSPHLL RYNERVRIDGEEASDAQLVDAFAAVEAARGDTALTYFEFGTLAALWLFQSAALDLTVLEIGLGGRLDAVNIVDADVAVIT TVDIDHTDWLGEDREAIGTEKAGIMRAWKPVVLGEIDPPSSVLRRAYQLGANAIRAGSDYFFEPIEVQHPENPQSDAPQW RWRDVAVTLELPMPALHAPVQLANAAAAIAALQALPVEVPAAAWVQGIGNAQVAGRLQRLAVDGLQVLLDVGHNPQAARA LAAALGAQAHAGSTYAIYAALADKDVVGVVEAVAAQIDHWALAGLEGARGQSAQALHARLQGTAAAQALCHRDVASAVEA VLATASPGDRVLVFGSFHTVADALSALHSAC
Specific function: Conversion of folates to polyglutamate derivatives [H]
COG id: COG0285
COG function: function code H; Folylpolyglutamate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the folylpolyglutamate synthase family [H]
Homologues:
Organism=Homo sapiens, GI66932984, Length=177, Percent_Identity=37.2881355932203, Blast_Score=111, Evalue=1e-24, Organism=Homo sapiens, GI66932990, Length=177, Percent_Identity=37.2881355932203, Blast_Score=110, Evalue=2e-24, Organism=Escherichia coli, GI1788654, Length=425, Percent_Identity=44.7058823529412, Blast_Score=324, Evalue=6e-90, Organism=Caenorhabditis elegans, GI17553148, Length=177, Percent_Identity=36.1581920903955, Blast_Score=116, Evalue=2e-26, Organism=Caenorhabditis elegans, GI71984923, Length=177, Percent_Identity=36.1581920903955, Blast_Score=116, Evalue=2e-26, Organism=Caenorhabditis elegans, GI17553150, Length=177, Percent_Identity=36.1581920903955, Blast_Score=116, Evalue=2e-26, Organism=Saccharomyces cerevisiae, GI6323760, Length=370, Percent_Identity=24.0540540540541, Blast_Score=99, Evalue=1e-21, Organism=Saccharomyces cerevisiae, GI6324815, Length=209, Percent_Identity=33.4928229665072, Blast_Score=93, Evalue=9e-20, Organism=Drosophila melanogaster, GI24641571, Length=150, Percent_Identity=37.3333333333333, Blast_Score=102, Evalue=7e-22, Organism=Drosophila melanogaster, GI24581568, Length=145, Percent_Identity=37.2413793103448, Blast_Score=91, Evalue=2e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018109 - InterPro: IPR001645 - InterPro: IPR004101 - InterPro: IPR013221 [H]
Pfam domain/function: PF08245 Mur_ligase_M [H]
EC number: =6.3.2.17 [H]
Molecular weight: Translated: 45304; Mature: 45172
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTPTTLSEWLAYIEQQHPSSIAMGLERVREVAARLQIAAPAKHAIVVGGTNGKGSTVAF CCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEECCCCEEEEEECCCCCCCHHHH IEAIGRAAGWKIGAYTSPHLLRYNERVRIDGEEASDAQLVDAFAAVEAARGDTALTYFEF HHHHHHHCCCEECCCCCCCEEEECCEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEEHH GTLAALWLFQSAALDLTVLEIGLGGRLDAVNIVDADVAVITTVDIDHTDWLGEDREAIGT HHHHHHHHHHHHCCEEEEEEECCCCCCCEEEEEECCEEEEEEEECCCCCCCCCCHHHHCC EKAGIMRAWKPVVLGEIDPPSSVLRRAYQLGANAIRAGSDYFFEPIEVQHPENPQSDAPQ CHHHHHHHCCCEEEECCCCHHHHHHHHHHHCCHHEECCCCCCCCCEEECCCCCCCCCCCC WRWRDVAVTLELPMPALHAPVQLANAAAAIAALQALPVEVPAAAWVQGIGNAQVAGRLQR CEEEEEEEEEECCCCHHHCHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHH LAVDGLQVLLDVGHNPQAARALAAALGAQAHAGSTYAIYAALADKDVVGVVEAVAAQIDH HHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHH WALAGLEGARGQSAQALHARLQGTAAAQALCHRDVASAVEAVLATASPGDRVLVFGSFHT HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECHHH VADALSALHSAC HHHHHHHHHHCC >Mature Secondary Structure TTPTTLSEWLAYIEQQHPSSIAMGLERVREVAARLQIAAPAKHAIVVGGTNGKGSTVAF CCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEECCCCEEEEEECCCCCCCHHHH IEAIGRAAGWKIGAYTSPHLLRYNERVRIDGEEASDAQLVDAFAAVEAARGDTALTYFEF HHHHHHHCCCEECCCCCCCEEEECCEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEEHH GTLAALWLFQSAALDLTVLEIGLGGRLDAVNIVDADVAVITTVDIDHTDWLGEDREAIGT HHHHHHHHHHHHCCEEEEEEECCCCCCCEEEEEECCEEEEEEEECCCCCCCCCCHHHHCC EKAGIMRAWKPVVLGEIDPPSSVLRRAYQLGANAIRAGSDYFFEPIEVQHPENPQSDAPQ CHHHHHHHCCCEEEECCCCHHHHHHHHHHHCCHHEECCCCCCCCCEEECCCCCCCCCCCC WRWRDVAVTLELPMPALHAPVQLANAAAAIAALQALPVEVPAAAWVQGIGNAQVAGRLQR CEEEEEEEEEECCCCHHHCHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHH LAVDGLQVLLDVGHNPQAARALAAALGAQAHAGSTYAIYAALADKDVVGVVEAVAAQIDH HHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHH WALAGLEGARGQSAQALHARLQGTAAAQALCHRDVASAVEAVLATASPGDRVLVFGSFHT HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECHHH VADALSALHSAC HHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]