| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84625131
Identifier: 84625131
GI number: 84625131
Start: 3934149
End: 3935231
Strand: Reverse
Name: 84625131
Synonym: XOO_3474
Alternate gene names: NA
Gene position: 3935231-3934149 (Counterclockwise)
Preceding gene: 84625132
Following gene: 84625130
Centisome position: 79.66
GC content: 69.62
Gene sequence:
>1083_bases GTGGATACTGCTCTGAAACAGCGACTGATTGGCGCCATCGTTCTGGTGGCGCTTGCCGTGATCTTCCTGCCGATGCTGGT CAAGGGCCCCGCGCCGTCGAGCGGTGTGGCCGATGTGCCGCTCCAGGCACCTGCAGCACCTGCCAAGGGCGAGTTCGAAA CCCACGAATTGCCGCTGGTCACCCCTGGCAATGCGCCGGCCGGTGGCGCGCTGGGCATGGCCGGTGCGCCGGCGTCGGTG CAGAACAACCCCGATGCCGCCGATCTGGCCGCCCCGTCCAGCACGCCTTCCGCACCGGAAGTGGCCGCCGGCAATTACGC GGTCAATTTCGGCGCCTACGCCACCAGTGCCGATGCCGATGCGGTGATTGCGCGACTCAAGCAGGCGCAGTTGCCCGGCT TCAGCGAAAAAACCCAGATCAACGGCCGCCCGGCCTGGCGCGTGCGCGTTGGGCCGTACGCCGACCAGGCCCAGGCCGAA TCGGCGCGCCTGCAGGCAGTGAAAGTGCGCAGCGACGTGAACGCCCAGGTGGTGACGTTGGATGCCAACGCCGCCGCTCC GGCGCCTGTGGCCACCCCGCCCGTGCACGCACCGGCCACCAAGCCAAGCAGCAGCGTAGCCGCCGCGAGCACCACGGCAC CGACCAAGACCGAAAGCCTGCCGCCGGAGCCTGCCAAGCCGATCGCCGCCGCGCCCAAGCCGGCTGAAGCGCCCAAGCCC GTGCCGGCCAAGCCTGAAGTCACCAAGCCTTCAACCGCTCCGCCTGCAGCCGCCAAGCCGGAAGTGGCTGCCAAGCCTGA GCCTGCCAAGCCGGTGGCCACCGCACCGGCAGCGCCTGCGGCCAGTGCGGTCGGTTTTGCAGTACAGCTGGGTGCGTTCG CGCGCGCCGAAGACGCCGACGCCTTGCGCGACCGTGTGCGCGCTGCCGGCTTCAGCGCCTTCGTCGAACAGGTGCGGACC GACAAGGGCGCGCTCAACCGCGTGCGTGTCGGCCCGGTCGCCAATCGCGGCGATGCCGAACAGTTGCGTGCCCAGGTGGC AGCCAAGGTCGGGATTTCCGGCATGGTGCGGCCACATCCGTAA
Upstream 100 bases:
>100_bases GACGCGCTTAGCGCACTTCATTCAGCCTGTTGAGGTCGTCGAGGTGGCGCCGGCCTTATAATCGCCGCGGCACCCCGCCA CGCCGCCTCTCGTCTCTTCC
Downstream 100 bases:
>100_bases TGTCTGTACCAGCTGCAAGCACACGCGGCCACTGCGGACGTGGCAGCCGCCCGTCCACTGCGTTGCTGGCGCGCCGTCAT GTGTCGGCTAACTGCCTGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 360; Mature: 360
Protein sequence:
>360_residues MDTALKQRLIGAIVLVALAVIFLPMLVKGPAPSSGVADVPLQAPAAPAKGEFETHELPLVTPGNAPAGGALGMAGAPASV QNNPDAADLAAPSSTPSAPEVAAGNYAVNFGAYATSADADAVIARLKQAQLPGFSEKTQINGRPAWRVRVGPYADQAQAE SARLQAVKVRSDVNAQVVTLDANAAAPAPVATPPVHAPATKPSSSVAAASTTAPTKTESLPPEPAKPIAAAPKPAEAPKP VPAKPEVTKPSTAPPAAAKPEVAAKPEPAKPVATAPAAPAASAVGFAVQLGAFARAEDADALRDRVRAAGFSAFVEQVRT DKGALNRVRVGPVANRGDAEQLRAQVAAKVGISGMVRPHP
Sequences:
>Translated_360_residues MDTALKQRLIGAIVLVALAVIFLPMLVKGPAPSSGVADVPLQAPAAPAKGEFETHELPLVTPGNAPAGGALGMAGAPASV QNNPDAADLAAPSSTPSAPEVAAGNYAVNFGAYATSADADAVIARLKQAQLPGFSEKTQINGRPAWRVRVGPYADQAQAE SARLQAVKVRSDVNAQVVTLDANAAAPAPVATPPVHAPATKPSSSVAAASTTAPTKTESLPPEPAKPIAAAPKPAEAPKP VPAKPEVTKPSTAPPAAAKPEVAAKPEPAKPVATAPAAPAASAVGFAVQLGAFARAEDADALRDRVRAAGFSAFVEQVRT DKGALNRVRVGPVANRGDAEQLRAQVAAKVGISGMVRPHP >Mature_360_residues MDTALKQRLIGAIVLVALAVIFLPMLVKGPAPSSGVADVPLQAPAAPAKGEFETHELPLVTPGNAPAGGALGMAGAPASV QNNPDAADLAAPSSTPSAPEVAAGNYAVNFGAYATSADADAVIARLKQAQLPGFSEKTQINGRPAWRVRVGPYADQAQAE SARLQAVKVRSDVNAQVVTLDANAAAPAPVATPPVHAPATKPSSSVAAASTTAPTKTESLPPEPAKPIAAAPKPAEAPKP VPAKPEVTKPSTAPPAAAKPEVAAKPEPAKPVATAPAAPAASAVGFAVQLGAFARAEDADALRDRVRAAGFSAFVEQVRT DKGALNRVRVGPVANRGDAEQLRAQVAAKVGISGMVRPHP
Specific function: Unknown
COG id: COG3147
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36085; Mature: 36085
Theoretical pI: Translated: 10.16; Mature: 10.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTALKQRLIGAIVLVALAVIFLPMLVKGPAPSSGVADVPLQAPAAPAKGEFETHELPLV CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE TPGNAPAGGALGMAGAPASVQNNPDAADLAAPSSTPSAPEVAAGNYAVNFGAYATSADAD CCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCHH AVIARLKQAQLPGFSEKTQINGRPAWRVRVGPYADQAQAESARLQAVKVRSDVNAQVVTL HHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHEEEEECCCCCEEEEEE DANAAAPAPVATPPVHAPATKPSSSVAAASTTAPTKTESLPPEPAKPIAAAPKPAEAPKP ECCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC VPAKPEVTKPSTAPPAAAKPEVAAKPEPAKPVATAPAAPAASAVGFAVQLGAFARAEDAD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHCCCHHH ALRDRVRAAGFSAFVEQVRTDKGALNRVRVGPVANRGDAEQLRAQVAAKVGISGMVRPHP HHHHHHHHHHHHHHHHHHHHCHHHHCEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MDTALKQRLIGAIVLVALAVIFLPMLVKGPAPSSGVADVPLQAPAAPAKGEFETHELPLV CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE TPGNAPAGGALGMAGAPASVQNNPDAADLAAPSSTPSAPEVAAGNYAVNFGAYATSADAD CCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCHH AVIARLKQAQLPGFSEKTQINGRPAWRVRVGPYADQAQAESARLQAVKVRSDVNAQVVTL HHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHEEEEECCCCCEEEEEE DANAAAPAPVATPPVHAPATKPSSSVAAASTTAPTKTESLPPEPAKPIAAAPKPAEAPKP ECCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC VPAKPEVTKPSTAPPAAAKPEVAAKPEPAKPVATAPAAPAASAVGFAVQLGAFARAEDAD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHCCCHHH ALRDRVRAAGFSAFVEQVRTDKGALNRVRVGPVANRGDAEQLRAQVAAKVGISGMVRPHP HHHHHHHHHHHHHHHHHHHHCHHHHCEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA