| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84624950
Identifier: 84624950
GI number: 84624950
Start: 3745930
End: 3747426
Strand: Reverse
Name: 84624950
Synonym: XOO_3293
Alternate gene names: NA
Gene position: 3747426-3745930 (Counterclockwise)
Preceding gene: 84624951
Following gene: 84624949
Centisome position: 75.86
GC content: 61.52
Gene sequence:
>1497_bases ATGGTCGCAGAGGTTTCGAGTGCCACCCACAATTCGGCGCCCGCCGCGCTGGCAGAAACAGGCTTGCTCGACCAGATCGT CGAGCAGAGCAAGGTCGCCAAATCGGAGACCGAGCACCAGCGTGCGAAGGACATCATCTCCGAGCTGGCCAAGGAGGTGC TGGAAGGTACCGTCGTGGTGTCGGACAACCTCAATCTGACGCTGGACGCGCGCATTGCCGAGATCGACCGGATCATCTCC GAGCAGCTGAGCGCGGTGATGCATGCGCCGGAGTTCCAGAAGCTGGAGAGCAGCTGGCGCGGCCTGCACTACATGTGCGA GCAGACGTCCACCGGCGTGACGATGAAGATCAAGGTCTTCAACTCGCCCCAGCGGGATCTGGTGCGCGACTTCAAGTCGG CGATCGACTTCGATCAAAGCGCGCTGTTCAAGAAGGTCTACGAGGAAGAGTTCGGCACCTTCGGCGGTGCGCCATTCGGC GCATTGGTCGGCGACTACTACATCGGCCGCCAGCCGGAGGACATGTACTTCGTCGAGCAGATGTCGCATGTGGCCGCCGC GGCGCACGCGCCCTTCATCTCTGCCGCGTCTGAATCGATGTTTGGTCTGGAAACCTTCACCGACCTGGGCAAACCGCGCG ATCTGGCCAAGGTGTTCGACACTGTCGAATACGCCAAGTGGAAGTCGTTCCGTGAGTCGGAGGATAGCCGCTACGTCGGC CTGACCATGCCGCGTTTTCTCGGGCGGCTGCCGTACAACCCGAAGGACGGCACTACGGTCGAAGGCTTCAACTTCGTCGA AGACGTCGACGCTGCCGACCATAGCAAGTATCTGTGGTGCAACACCGCTTATGCGATGGCCACGCGCCTGACCAAGGCGT TCGAGGACTACGGTTGGTGCGCGGCGATCCGCGGTGTGGAAGGCGGTGGCCTGGTCGAAGACCTGCCGACCCACACCTTC CGCACCGACGACGGCGAAGTGGCGCTGAAGTGCCCGACCGAGATCGCGATCACCGACCGCCGCGAGAAGGAACTCAGCGA CCTGGGCTTCATCCCGCTGGTACATTGCAAGAACACCGACTACGCGGCGTTCTTCGGTGCGCAGTCGGCGCAGAAGCCGA AGAAGTACAACACCGATGCGGCCAATGCCAACGCGATCCTGTCGGCGCAGCTGCAGTACATGTTCGCCGTGTCGCGTATC GCCCATTACCTCAAGGCGATGATGCGCGAGAAGATCGGCAGTTTCGCCTCGGCGCGTAATGTCGAGGACTTCCTGAACCG TTGGATCTCCCAGTACGTGTTGTTGGACGACAACGCCGGTCAGGAAGCAAAGGCGCAATACCCCTTGCGGGAAGCGTCCG TACAAGTTTCGGAAGTGCCGGGGAAACCCGGTGTCTACCGCGCGGTGGCCTTCATCAGGCCGCATTTCCAGCTCGATGAG CTGTCTGTTTCGTTGCGTCTGGTGGCCGAACTGCCGGCTGGTACCAAGAAGGCGTAG
Upstream 100 bases:
>100_bases CAAGCTGGCCGGCAACGAGAAGCTCGAAGACCTGCTAACGGACGTGTTGAACAACACCGAACAGCTGAAGAAGCTGGGTC GGGAAAAGGAGAAGTAAGCC
Downstream 100 bases:
>100_bases CGTTTCTTGTTGTCGTAGCGTCGAGGGACGGAGATCCCACTGTTTTGCAGTTGACGCAATGTCCTTCGGGACAGGCAAAT AACCGCCAGGCCCTGCCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 498; Mature: 498
Protein sequence:
>498_residues MVAEVSSATHNSAPAALAETGLLDQIVEQSKVAKSETEHQRAKDIISELAKEVLEGTVVVSDNLNLTLDARIAEIDRIIS EQLSAVMHAPEFQKLESSWRGLHYMCEQTSTGVTMKIKVFNSPQRDLVRDFKSAIDFDQSALFKKVYEEEFGTFGGAPFG ALVGDYYIGRQPEDMYFVEQMSHVAAAAHAPFISAASESMFGLETFTDLGKPRDLAKVFDTVEYAKWKSFRESEDSRYVG LTMPRFLGRLPYNPKDGTTVEGFNFVEDVDAADHSKYLWCNTAYAMATRLTKAFEDYGWCAAIRGVEGGGLVEDLPTHTF RTDDGEVALKCPTEIAITDRREKELSDLGFIPLVHCKNTDYAAFFGAQSAQKPKKYNTDAANANAILSAQLQYMFAVSRI AHYLKAMMREKIGSFASARNVEDFLNRWISQYVLLDDNAGQEAKAQYPLREASVQVSEVPGKPGVYRAVAFIRPHFQLDE LSVSLRLVAELPAGTKKA
Sequences:
>Translated_498_residues MVAEVSSATHNSAPAALAETGLLDQIVEQSKVAKSETEHQRAKDIISELAKEVLEGTVVVSDNLNLTLDARIAEIDRIIS EQLSAVMHAPEFQKLESSWRGLHYMCEQTSTGVTMKIKVFNSPQRDLVRDFKSAIDFDQSALFKKVYEEEFGTFGGAPFG ALVGDYYIGRQPEDMYFVEQMSHVAAAAHAPFISAASESMFGLETFTDLGKPRDLAKVFDTVEYAKWKSFRESEDSRYVG LTMPRFLGRLPYNPKDGTTVEGFNFVEDVDAADHSKYLWCNTAYAMATRLTKAFEDYGWCAAIRGVEGGGLVEDLPTHTF RTDDGEVALKCPTEIAITDRREKELSDLGFIPLVHCKNTDYAAFFGAQSAQKPKKYNTDAANANAILSAQLQYMFAVSRI AHYLKAMMREKIGSFASARNVEDFLNRWISQYVLLDDNAGQEAKAQYPLREASVQVSEVPGKPGVYRAVAFIRPHFQLDE LSVSLRLVAELPAGTKKA >Mature_498_residues MVAEVSSATHNSAPAALAETGLLDQIVEQSKVAKSETEHQRAKDIISELAKEVLEGTVVVSDNLNLTLDARIAEIDRIIS EQLSAVMHAPEFQKLESSWRGLHYMCEQTSTGVTMKIKVFNSPQRDLVRDFKSAIDFDQSALFKKVYEEEFGTFGGAPFG ALVGDYYIGRQPEDMYFVEQMSHVAAAAHAPFISAASESMFGLETFTDLGKPRDLAKVFDTVEYAKWKSFRESEDSRYVG LTMPRFLGRLPYNPKDGTTVEGFNFVEDVDAADHSKYLWCNTAYAMATRLTKAFEDYGWCAAIRGVEGGGLVEDLPTHTF RTDDGEVALKCPTEIAITDRREKELSDLGFIPLVHCKNTDYAAFFGAQSAQKPKKYNTDAANANAILSAQLQYMFAVSRI AHYLKAMMREKIGSFASARNVEDFLNRWISQYVLLDDNAGQEAKAQYPLREASVQVSEVPGKPGVYRAVAFIRPHFQLDE LSVSLRLVAELPAGTKKA
Specific function: Unknown
COG id: COG3517
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55357; Mature: 55357
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVAEVSSATHNSAPAALAETGLLDQIVEQSKVAKSETEHQRAKDIISELAKEVLEGTVVV CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE SDNLNLTLDARIAEIDRIISEQLSAVMHAPEFQKLESSWRGLHYMCEQTSTGVTMKIKVF ECCCCEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEE NSPQRDLVRDFKSAIDFDQSALFKKVYEEEFGTFGGAPFGALVGDYYIGRQPEDMYFVEQ CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHH MSHVAAAAHAPFISAASESMFGLETFTDLGKPRDLAKVFDTVEYAKWKSFRESEDSRYVG HHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEE LTMPRFLGRLPYNPKDGTTVEGFNFVEDVDAADHSKYLWCNTAYAMATRLTKAFEDYGWC EEHHHHHCCCCCCCCCCCEECCCCHHHHCCCCCCCCEEEECHHHHHHHHHHHHHHHCCHH AAIRGVEGGGLVEDLPTHTFRTDDGEVALKCPTEIAITDRREKELSDLGFIPLVHCKNTD HHCCCCCCCCCHHHCCCCCEECCCCCEEEECCCEEEECCCHHHHHHHCCCEEEEEECCCC YAAFFGAQSAQKPKKYNTDAANANAILSAQLQYMFAVSRIAHYLKAMMREKIGSFASARN CCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC VEDFLNRWISQYVLLDDNAGQEAKAQYPLREASVQVSEVPGKPGVYRAVAFIRPHFQLDE HHHHHHHHHHCEEEEECCCCCCCHHCCCHHHHCEEHCCCCCCCCHHHHHHHHCCCCCHHH LSVSLRLVAELPAGTKKA HHHHHHHEECCCCCCCCC >Mature Secondary Structure MVAEVSSATHNSAPAALAETGLLDQIVEQSKVAKSETEHQRAKDIISELAKEVLEGTVVV CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE SDNLNLTLDARIAEIDRIISEQLSAVMHAPEFQKLESSWRGLHYMCEQTSTGVTMKIKVF ECCCCEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEE NSPQRDLVRDFKSAIDFDQSALFKKVYEEEFGTFGGAPFGALVGDYYIGRQPEDMYFVEQ CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHH MSHVAAAAHAPFISAASESMFGLETFTDLGKPRDLAKVFDTVEYAKWKSFRESEDSRYVG HHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEE LTMPRFLGRLPYNPKDGTTVEGFNFVEDVDAADHSKYLWCNTAYAMATRLTKAFEDYGWC EEHHHHHCCCCCCCCCCCEECCCCHHHHCCCCCCCCEEEECHHHHHHHHHHHHHHHCCHH AAIRGVEGGGLVEDLPTHTFRTDDGEVALKCPTEIAITDRREKELSDLGFIPLVHCKNTD HHCCCCCCCCCHHHCCCCCEECCCCCEEEECCCEEEECCCHHHHHHHCCCEEEEEECCCC YAAFFGAQSAQKPKKYNTDAANANAILSAQLQYMFAVSRIAHYLKAMMREKIGSFASARN CCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC VEDFLNRWISQYVLLDDNAGQEAKAQYPLREASVQVSEVPGKPGVYRAVAFIRPHFQLDE HHHHHHHHHHCEEEEECCCCCCCHHCCCHHHHCEEHCCCCCCCCHHHHHHHHCCCCCHHH LSVSLRLVAELPAGTKKA HHHHHHHEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA