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The map label for this gene is 84624951

Identifier: 84624951

GI number: 84624951

Start: 3747430

End: 3747930

Strand: Reverse

Name: 84624951

Synonym: XOO_3294

Alternate gene names: NA

Gene position: 3747930-3747430 (Counterclockwise)

Preceding gene: 84624952

Following gene: 84624950

Centisome position: 75.87

GC content: 58.28

Gene sequence:

>501_bases
ATGGCTAAGAAGGAAAGCATCCAGAAACGTCTGCAGAAGATTCGGCCACCGCGCGTGCAGCTGACATACGACGTGGAAAA
GGGTGACGCGATCGAACAGAAGGAGCTGCCGTTCGTGGTAGGCGTGCTTGGGGATTTCAGCGGCAATCCCGAACAGCCCC
TGGCCAAGGTCAAGGATCGCAAATTCGTCAACGTCGACCTCGACAACTTCGACGAGGTGATGGAGGGAATGGCGCCGCGC
GCGGTTTACCGCGTGCCGAACAAGATCAGCGATGCCGGCGGCGAGTTCGGCGTCGAACTCAAGTTCAAGTCGATCGACGA
CTTCCGTCCGGAGGCTGTGGTCGATCAGGTCGAACCGCTGCGCAAGCTGCTAGAATCGCGCACCAAGCTGGCAGACCTGC
GCAACAAGCTGGCCGGCAACGAGAAGCTCGAAGACCTGCTAACGGACGTGTTGAACAACACCGAACAGCTGAAGAAGCTG
GGTCGGGAAAAGGAGAAGTAA

Upstream 100 bases:

>100_bases
AAGGAAACGCCCAATGCGTCGGCCGATCCGTTCCAGCACCTGGGCGGCAATTGAGCCGGTCATCCGGACTCCCCTAAAGC
CTTAACGTCAGGAGACACCA

Downstream 100 bases:

>100_bases
GCCATGGTCGCAGAGGTTTCGAGTGCCACCCACAATTCGGCGCCCGCCGCGCTGGCAGAAACAGGCTTGCTCGACCAGAT
CGTCGAGCAGAGCAAGGTCG

Product: hypothetical protein

Products: NA

Alternate protein names: Type VI Secretion Protein Family; Cytoplasmic Protein; T6ss S; Protein ImpB; Conserved Protein; Cytoplasmic Protein SciH; Type VI Secretion Protein VasQ; Type VI Secretion System Protein; Type VI Secretion; Type VI Secretion System Core Protein; Type VI Secretion System Protein ImpB

Number of amino acids: Translated: 166; Mature: 165

Protein sequence:

>166_residues
MAKKESIQKRLQKIRPPRVQLTYDVEKGDAIEQKELPFVVGVLGDFSGNPEQPLAKVKDRKFVNVDLDNFDEVMEGMAPR
AVYRVPNKISDAGGEFGVELKFKSIDDFRPEAVVDQVEPLRKLLESRTKLADLRNKLAGNEKLEDLLTDVLNNTEQLKKL
GREKEK

Sequences:

>Translated_166_residues
MAKKESIQKRLQKIRPPRVQLTYDVEKGDAIEQKELPFVVGVLGDFSGNPEQPLAKVKDRKFVNVDLDNFDEVMEGMAPR
AVYRVPNKISDAGGEFGVELKFKSIDDFRPEAVVDQVEPLRKLLESRTKLADLRNKLAGNEKLEDLLTDVLNNTEQLKKL
GREKEK
>Mature_165_residues
AKKESIQKRLQKIRPPRVQLTYDVEKGDAIEQKELPFVVGVLGDFSGNPEQPLAKVKDRKFVNVDLDNFDEVMEGMAPRA
VYRVPNKISDAGGEFGVELKFKSIDDFRPEAVVDQVEPLRKLLESRTKLADLRNKLAGNEKLEDLLTDVLNNTEQLKKLG
REKEK

Specific function: Unknown

COG id: COG3516

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18892; Mature: 18761

Theoretical pI: Translated: 7.00; Mature: 7.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKKESIQKRLQKIRPPRVQLTYDVEKGDAIEQKELPFVVGVLGDFSGNPEQPLAKVKDR
CCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHCCCCCEEEHHCCCCCCCCHHHHHCCC
KFVNVDLDNFDEVMEGMAPRAVYRVPNKISDAGGEFGVELKFKSIDDFRPEAVVDQVEPL
EEEECCCCCHHHHHHCCCCHHHHHCCCHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHH
RKLLESRTKLADLRNKLAGNEKLEDLLTDVLNNTEQLKKLGREKEK
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHCCCC
>Mature Secondary Structure 
AKKESIQKRLQKIRPPRVQLTYDVEKGDAIEQKELPFVVGVLGDFSGNPEQPLAKVKDR
CCHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHCCCCCEEEHHCCCCCCCCHHHHHCCC
KFVNVDLDNFDEVMEGMAPRAVYRVPNKISDAGGEFGVELKFKSIDDFRPEAVVDQVEPL
EEEECCCCCHHHHHHCCCCHHHHHCCCHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHH
RKLLESRTKLADLRNKLAGNEKLEDLLTDVLNNTEQLKKLGREKEK
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA