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The map label for this gene is 84624946

Identifier: 84624946

GI number: 84624946

Start: 3741762

End: 3742853

Strand: Reverse

Name: 84624946

Synonym: XOO_3289

Alternate gene names: NA

Gene position: 3742853-3741762 (Counterclockwise)

Preceding gene: 84624947

Following gene: 84624945

Centisome position: 75.76

GC content: 67.95

Gene sequence:

>1092_bases
ATGCTTACCGCGAAGCGGCGAATCGATCCTGGCATAGCGCTGCAACTGCTGGCCGAGCCGCATCGCTTCCAGTTTTTCCA
GGCGATGCGGATTCTGGAGCGGGTGTTCCAGCGCCAGGGGGTCAAGGCCGGTCAGGCCCTGCCCACACGCGTACGTTTTC
ACAACTCGCTGTCGTTGGCGTTTCCGGCGACCGAGCTGGACCCCGTCGGCCAGGCCTATTCGCAGGACGGCGAGCGCCTG
GAAAGCGATGCGGCGCTGGCGTTCGCGATCGAGACCGAGAGCCTGGGCGAAGTGCATCTGACCCCGAACTTCATGGGGTT
GCTGGGCACCTCCGGCGCATTGCCGCTGCACTACACCGAGACCCTGCACGAACGCGAGCTGTACCAGCGCGACCGTACCC
CACGCGCGTTCCTGGACATGTTCTCCAACCGCGCGGTGGCGCTGCACTACGCCGCGTGGAAGAAGCACCGGCTGGCGCTG
CAGTATGAGCTGGACCGGCGCGAACGCTTCCTGCCGCTGGTGCTGTCGCTGCTGGGCATGGGCATGCCGGGACTGCGCGA
TCGCATGGTCGACGGCGGCGGCGACGTCTTCGACCAGGCGGTGGCGTACTACGCCGGCGCCATCCGCCAGCGGCCGATCT
CGGCCAAGCTGCTGCAGCGCGTGCTGGCCGACTACTTCAAGGTGCCGGTGGAGCTGGAGCAGTTCGTCGGCGCCTGGTAC
AAGGTGCCGGCGCAACAGGCCACGCGGCTGGGCCAGGCAAACGCCACACTCGGGTCCAGTGCGCTGGCCGGCGACCGGGT
GTGGCAGCGCGACCTGCGCATGCGCCTGCGCTTCGGTCCGCTGCAGCGTGAGGCTTTCGACCAGTTCCTGCCCGGAGGCA
GCGCCGCGAAGGCCTTGTCGAAATGGCTGATGCTGCTCACCGGCGGCGGGCTGGAATACGAGGTCAAGCTGGTGCTGCGC
GCCGAGGACGTACGCGGCTCCGGCGTCGGCGAAGCACTGGGCGTACGCCTGGGCTGGGACAGCTACCTATGCTCGCGCCC
GCAGACCCAGCCGCGCGCCGACACCACCTACGGTCTGCATACCCTTCAATAG

Upstream 100 bases:

>100_bases
TCGCGCATGTGCTCGACCACTTCTTCGGCCTCTACGTCCACGCCAACAGCTTTATCCAGCTGGTGCTCATTTCCAGCGAC
ACAGGGGAGGAACTCGTCCG

Downstream 100 bases:

>100_bases
CCCGGGCGCGAGCCCAACGCCGACGGCAGGCAGTGACGTCGGCGTCACATCATGAAACCGCCAGCATGGAGCGTCCTGTT
TTCGCATGAGCATCAATCTC

Product: hypothetical protein

Products: NA

Alternate protein names: Type VI Secretion Protein Family; Quinoprotein Dehydrogenase; Cytoplasmic Protein; Type VI Secretion System Protein ImpH; Type VI Secretion System Protein; Type VI Secretion Protein VasG; T6ss R; Type VI Secretion System Core Protein; Type VI Secretion System Protein EvpG; Conserved Protein; Protein ImpH; Secreted Protein; Cytoplasmic Protein SciB

Number of amino acids: Translated: 363; Mature: 363

Protein sequence:

>363_residues
MLTAKRRIDPGIALQLLAEPHRFQFFQAMRILERVFQRQGVKAGQALPTRVRFHNSLSLAFPATELDPVGQAYSQDGERL
ESDAALAFAIETESLGEVHLTPNFMGLLGTSGALPLHYTETLHERELYQRDRTPRAFLDMFSNRAVALHYAAWKKHRLAL
QYELDRRERFLPLVLSLLGMGMPGLRDRMVDGGGDVFDQAVAYYAGAIRQRPISAKLLQRVLADYFKVPVELEQFVGAWY
KVPAQQATRLGQANATLGSSALAGDRVWQRDLRMRLRFGPLQREAFDQFLPGGSAAKALSKWLMLLTGGGLEYEVKLVLR
AEDVRGSGVGEALGVRLGWDSYLCSRPQTQPRADTTYGLHTLQ

Sequences:

>Translated_363_residues
MLTAKRRIDPGIALQLLAEPHRFQFFQAMRILERVFQRQGVKAGQALPTRVRFHNSLSLAFPATELDPVGQAYSQDGERL
ESDAALAFAIETESLGEVHLTPNFMGLLGTSGALPLHYTETLHERELYQRDRTPRAFLDMFSNRAVALHYAAWKKHRLAL
QYELDRRERFLPLVLSLLGMGMPGLRDRMVDGGGDVFDQAVAYYAGAIRQRPISAKLLQRVLADYFKVPVELEQFVGAWY
KVPAQQATRLGQANATLGSSALAGDRVWQRDLRMRLRFGPLQREAFDQFLPGGSAAKALSKWLMLLTGGGLEYEVKLVLR
AEDVRGSGVGEALGVRLGWDSYLCSRPQTQPRADTTYGLHTLQ
>Mature_363_residues
MLTAKRRIDPGIALQLLAEPHRFQFFQAMRILERVFQRQGVKAGQALPTRVRFHNSLSLAFPATELDPVGQAYSQDGERL
ESDAALAFAIETESLGEVHLTPNFMGLLGTSGALPLHYTETLHERELYQRDRTPRAFLDMFSNRAVALHYAAWKKHRLAL
QYELDRRERFLPLVLSLLGMGMPGLRDRMVDGGGDVFDQAVAYYAGAIRQRPISAKLLQRVLADYFKVPVELEQFVGAWY
KVPAQQATRLGQANATLGSSALAGDRVWQRDLRMRLRFGPLQREAFDQFLPGGSAAKALSKWLMLLTGGGLEYEVKLVLR
AEDVRGSGVGEALGVRLGWDSYLCSRPQTQPRADTTYGLHTLQ

Specific function: Unknown

COG id: COG3520

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40685; Mature: 40685

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTAKRRIDPGIALQLLAEPHRFQFFQAMRILERVFQRQGVKAGQALPTRVRFHNSLSLA
CCCCCCCCCCCCEEHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHEEECCCEEEE
FPATELDPVGQAYSQDGERLESDAALAFAIETESLGEVHLTPNFMGLLGTSGALPLHYTE
ECCCCCCHHHHHHHCCHHHHHCCCEEEEEEECCCCCEEEECCCHHHHHCCCCCCCCHHHH
TLHERELYQRDRTPRAFLDMFSNRAVALHYAAWKKHRLALQYELDRRERFLPLVLSLLGM
HHHHHHHHHHCCCHHHHHHHHCCCEEEEEEHHHHHHHEEEEEEHHHHHHHHHHHHHHHCC
GMPGLRDRMVDGGGDVFDQAVAYYAGAIRQRPISAKLLQRVLADYFKVPVELEQFVGAWY
CCCCHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHH
KVPAQQATRLGQANATLGSSALAGDRVWQRDLRMRLRFGPLQREAFDQFLPGGSAAKALS
CCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHH
KWLMLLTGGGLEYEVKLVLRAEDVRGSGVGEALGVRLGWDSYLCSRPQTQPRADTTYGLH
HHHHHHCCCCCEEEEEEEEEECCCCCCCCCHHHEEEECCHHHHHCCCCCCCCCCCCCCCE
TLQ
ECC
>Mature Secondary Structure
MLTAKRRIDPGIALQLLAEPHRFQFFQAMRILERVFQRQGVKAGQALPTRVRFHNSLSLA
CCCCCCCCCCCCEEHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHEEECCCEEEE
FPATELDPVGQAYSQDGERLESDAALAFAIETESLGEVHLTPNFMGLLGTSGALPLHYTE
ECCCCCCHHHHHHHCCHHHHHCCCEEEEEEECCCCCEEEECCCHHHHHCCCCCCCCHHHH
TLHERELYQRDRTPRAFLDMFSNRAVALHYAAWKKHRLALQYELDRRERFLPLVLSLLGM
HHHHHHHHHHCCCHHHHHHHHCCCEEEEEEHHHHHHHEEEEEEHHHHHHHHHHHHHHHCC
GMPGLRDRMVDGGGDVFDQAVAYYAGAIRQRPISAKLLQRVLADYFKVPVELEQFVGAWY
CCCCHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHH
KVPAQQATRLGQANATLGSSALAGDRVWQRDLRMRLRFGPLQREAFDQFLPGGSAAKALS
CCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHH
KWLMLLTGGGLEYEVKLVLRAEDVRGSGVGEALGVRLGWDSYLCSRPQTQPRADTTYGLH
HHHHHHCCCCCEEEEEEEEEECCCCCCCCCHHHEEEECCHHHHHCCCCCCCCCCCCCCCE
TLQ
ECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA