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The map label for this gene is clpV1 [H]

Identifier: 84624945

GI number: 84624945

Start: 3738947

End: 3741676

Strand: Reverse

Name: clpV1 [H]

Synonym: XOO_3288

Alternate gene names: 84624945

Gene position: 3741676-3738947 (Counterclockwise)

Preceding gene: 84624946

Following gene: 84624944

Centisome position: 75.74

GC content: 68.02

Gene sequence:

>2730_bases
ATGAGCATCAATCTCAAGACCCTGATCAGCAAACTCGACGACACCTGCCGGCAGGCGGCCGAGCGCGCGGCCAATCTGTG
CATGGCGCGCGGCAACTACGAAGTCGACCTGGAGCATCTGTTCCTGGCGCTGCTGGAGCAACCGCAAAGCGATTTCGTGC
TGATCGCGCGCCGCTGCGGCATTTCGCCGGAGACGCTGGAACGCGATCTCAGCGAGGAGGTCGGCCGCTTCAAGGCCGGC
AATACGCGCACGCCGGTATTTTCCCAGCACCTGCCCACGCTGTTCGAGCACGCCTGGCTGATCGCCTCGCTGGATTCGGA
AACCACGCGCATCCGCAGCGGTCATCTGCTGCTGGCGCTGCTGACCGAGCCAGACCTGTCGCAGCTGGCCTACCGCGGTT
CCAAGCAGTTCGTGAAGATCAAGCTCGACGCGCTAAAGCACGACTTCGCCCGCCTCACCGAAGGCTCGCAGGAAGCCGGG
CAAAGCCTGCGTTTCGCCGATGCCGGCCAGGCCGACGTCGGCGGCGACCCGGTCGATGGCCTCGCCGGCGCGCCGGACGG
CAAGGGCGGCCTGACCAAGACCCCGGCGCTGGACCAGTTCACCACCAACCTCGTCCAGCGCGCCCGCGATGCGCAGATCG
ACCCGGTGATCGGCCGCGACGGCGAGATCCGCCAGGTGATCGACATCCTGATGCGGCGGCGCCAGAACAATCCGATCCTC
ACCGGCGAAGCCGGCGTCGGCAAGACCGCGGTCGTCGAGGGGCTGGCCCGGCGCATTGCCGAGAAGGACGTGCCGGACGT
GTTGCAGGGGGTGGAACTGCATGTGCTGGACATGGGCTTGCTGCAGGCCGGCGCCAGCGTCAAGGGCGAGTTCGAGAACC
GGCTGAAGAACGTCATCGACGAGGTCAAGAAGAGCCCGCATCCGATCATCCTGTTCATCGACGAGGCGCACACGATGATC
GGCGCCGGCGGGACCGCCGGCCAGAACGACGCGGCGAACCTGCTCAAGCCGGCGCTGGCGCGCGGCGAGCTGCGCACCAT
CGCGGCCACCACCTGGAGCGAATACAAGAAGTACTTCGAGAAGGACGCGGCGCTGGCACGGCGCTTCCAGGTGGTCAAGG
TCGAGGAGCCGAGCGAGACGCTGGCCGCGGCGATGCTGCGCGGCATGGTGCCGCTGATGGAGAAGCACTTCGGCATCCGG
GTGATGGACGAGGCGGTCACCGAGGCGGTGCGCCTGTCGCACCGCTACATCAGCGGCCGCCAGCTGCCGGACAAGGCGGT
CAGCGTGCTCGATACCGCCTGCGCCAAGGTCGCGCTCGGGCAGAGCGCCACCCCGGCGATCATCGAAGACACGCGCAAGC
ACCTGGACCGGCTGGCCGCGGAGCTGGCCGCGTTGAACCGCGAGACGTCCGGCGGCGCCCGCCACCACGACGCGCGCGTG
GCCGAGCTACTGCAAGCGCAGGAAAGCGCACGCAAGGTGCTGGCCGACAACCAGACGCGGCTGGTGCGCGAGCGCGAACT
GGCCGAGCGCATCGTCGCCCTGCGCGCGCAGCTGGAAGCGGCGCCGGCGGCGCACGAACCCGCGGCCGCCGCCAAGCCGG
CACGCGGCGCGGCGAAGCAGGCCACCGCGGCGGCTTCGCCGCAGCACGCCCAGCTGGACGCGCTGCTCGCCGAGCTGGGC
GAGCTGCAGGGCGAAACCCCGATGGTGCCGCTGCAGGTCGACGGCGGCGTGGTCGCCGAGATCGTCTCGGCCTGGACCGG
GGTGCCGCTGGGGCGCATGGTCAAGGACGAGATCCGCACCGTGCGCAACCTCGACAGCCTGCTCGGCGAGCGCGTCATCG
GCCAGGACCATGCGCTGGCCGCGATTGCCCAGCGCGTGCGCACCGCCACCGCCAAGCTGGAAGACCCGAACAAGCCCCGC
GGCGTCTTCCTCTTCGTCGGCCCGTCCGGCGTCGGCAAGACCGAGACCGCGCTGGCGCTGGCCGACATCCTGTACGGCGG
CGAGCGCAAGCTGATCACCATCAACATGAGCGAGTACCAGGAAGCGCACAGCGTGTCCGGGCTGAAGGGCTCTCCGCCTG
GCTACGTCGGCTATGGCGAGGGCGGCGTGCTGACCGAGGCGGTGCGGCGCAACCCGTACAGTGTGGTGCTGCTGGACGAG
GTGGAGAAAGCACACCCGGACGTGCTGGAGATGTTCTTCCAAGTGTTCGACAAGGGCGTGATGGACGATGCCGAAGGCCG
CGAGATCGACTTCCGCAACACCTTGATCATCCTCACGTCCAATGTCGGTTCCTCGCAGATCATGCAGGCCTGCCTGAACA
AGCCGGCCGAAGAGATTCCGGCCGCCGACGCATTGGCCGAGGCGTTGCGCCCGATCCTGATGCGCAGCTTCAAGCCGGCC
TTCCTCGGCCGGCTGAAGGTGGTGCCGTATTACCCGATCAGCGACGACGTGCTGGCGCAGATCATCGCGCTCAAGCTCGG
CCGCATCCGCGACCGCTTGGCGGCCAACCACAAGGCCGCCTTCCACTGGGACCAGAGCCTGGTGGAGGCGGTGTTGGCGC
GCTGTACGGAAGTGGATTCGGGCGCGCGCAACGTCGACCACATTCTGAATGGGACGCTGTTGCCGGAAATCGCCGAGAGC
GTGCTCGCGGCGATGGCCGAAGGCGGCAACATCAACGCCATCAAAGTAGGCGCCGGCAAGAACGGCGCGTTCAAATACAA
GTTATCCTGA

Upstream 100 bases:

>100_bases
CATACCCTTCAATAGCCCGGGCGCGAGCCCAACGCCGACGGCAGGCAGTGACGTCGGCGTCACATCATGAAACCGCCAGC
ATGGAGCGTCCTGTTTTCGC

Downstream 100 bases:

>100_bases
CCCCGCAGTCCATCACCAAGGAGGAACACCATGGATTTCTACGGATACAACCGCGCCAAAGCCATTGCCCATTGCGACAG
CCTGGTCGTGGGACGGGCAA

Product: putative ClpA/B-type chaperone protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 909; Mature: 908

Protein sequence:

>909_residues
MSINLKTLISKLDDTCRQAAERAANLCMARGNYEVDLEHLFLALLEQPQSDFVLIARRCGISPETLERDLSEEVGRFKAG
NTRTPVFSQHLPTLFEHAWLIASLDSETTRIRSGHLLLALLTEPDLSQLAYRGSKQFVKIKLDALKHDFARLTEGSQEAG
QSLRFADAGQADVGGDPVDGLAGAPDGKGGLTKTPALDQFTTNLVQRARDAQIDPVIGRDGEIRQVIDILMRRRQNNPIL
TGEAGVGKTAVVEGLARRIAEKDVPDVLQGVELHVLDMGLLQAGASVKGEFENRLKNVIDEVKKSPHPIILFIDEAHTMI
GAGGTAGQNDAANLLKPALARGELRTIAATTWSEYKKYFEKDAALARRFQVVKVEEPSETLAAAMLRGMVPLMEKHFGIR
VMDEAVTEAVRLSHRYISGRQLPDKAVSVLDTACAKVALGQSATPAIIEDTRKHLDRLAAELAALNRETSGGARHHDARV
AELLQAQESARKVLADNQTRLVRERELAERIVALRAQLEAAPAAHEPAAAAKPARGAAKQATAAASPQHAQLDALLAELG
ELQGETPMVPLQVDGGVVAEIVSAWTGVPLGRMVKDEIRTVRNLDSLLGERVIGQDHALAAIAQRVRTATAKLEDPNKPR
GVFLFVGPSGVGKTETALALADILYGGERKLITINMSEYQEAHSVSGLKGSPPGYVGYGEGGVLTEAVRRNPYSVVLLDE
VEKAHPDVLEMFFQVFDKGVMDDAEGREIDFRNTLIILTSNVGSSQIMQACLNKPAEEIPAADALAEALRPILMRSFKPA
FLGRLKVVPYYPISDDVLAQIIALKLGRIRDRLAANHKAAFHWDQSLVEAVLARCTEVDSGARNVDHILNGTLLPEIAES
VLAAMAEGGNINAIKVGAGKNGAFKYKLS

Sequences:

>Translated_909_residues
MSINLKTLISKLDDTCRQAAERAANLCMARGNYEVDLEHLFLALLEQPQSDFVLIARRCGISPETLERDLSEEVGRFKAG
NTRTPVFSQHLPTLFEHAWLIASLDSETTRIRSGHLLLALLTEPDLSQLAYRGSKQFVKIKLDALKHDFARLTEGSQEAG
QSLRFADAGQADVGGDPVDGLAGAPDGKGGLTKTPALDQFTTNLVQRARDAQIDPVIGRDGEIRQVIDILMRRRQNNPIL
TGEAGVGKTAVVEGLARRIAEKDVPDVLQGVELHVLDMGLLQAGASVKGEFENRLKNVIDEVKKSPHPIILFIDEAHTMI
GAGGTAGQNDAANLLKPALARGELRTIAATTWSEYKKYFEKDAALARRFQVVKVEEPSETLAAAMLRGMVPLMEKHFGIR
VMDEAVTEAVRLSHRYISGRQLPDKAVSVLDTACAKVALGQSATPAIIEDTRKHLDRLAAELAALNRETSGGARHHDARV
AELLQAQESARKVLADNQTRLVRERELAERIVALRAQLEAAPAAHEPAAAAKPARGAAKQATAAASPQHAQLDALLAELG
ELQGETPMVPLQVDGGVVAEIVSAWTGVPLGRMVKDEIRTVRNLDSLLGERVIGQDHALAAIAQRVRTATAKLEDPNKPR
GVFLFVGPSGVGKTETALALADILYGGERKLITINMSEYQEAHSVSGLKGSPPGYVGYGEGGVLTEAVRRNPYSVVLLDE
VEKAHPDVLEMFFQVFDKGVMDDAEGREIDFRNTLIILTSNVGSSQIMQACLNKPAEEIPAADALAEALRPILMRSFKPA
FLGRLKVVPYYPISDDVLAQIIALKLGRIRDRLAANHKAAFHWDQSLVEAVLARCTEVDSGARNVDHILNGTLLPEIAES
VLAAMAEGGNINAIKVGAGKNGAFKYKLS
>Mature_908_residues
SINLKTLISKLDDTCRQAAERAANLCMARGNYEVDLEHLFLALLEQPQSDFVLIARRCGISPETLERDLSEEVGRFKAGN
TRTPVFSQHLPTLFEHAWLIASLDSETTRIRSGHLLLALLTEPDLSQLAYRGSKQFVKIKLDALKHDFARLTEGSQEAGQ
SLRFADAGQADVGGDPVDGLAGAPDGKGGLTKTPALDQFTTNLVQRARDAQIDPVIGRDGEIRQVIDILMRRRQNNPILT
GEAGVGKTAVVEGLARRIAEKDVPDVLQGVELHVLDMGLLQAGASVKGEFENRLKNVIDEVKKSPHPIILFIDEAHTMIG
AGGTAGQNDAANLLKPALARGELRTIAATTWSEYKKYFEKDAALARRFQVVKVEEPSETLAAAMLRGMVPLMEKHFGIRV
MDEAVTEAVRLSHRYISGRQLPDKAVSVLDTACAKVALGQSATPAIIEDTRKHLDRLAAELAALNRETSGGARHHDARVA
ELLQAQESARKVLADNQTRLVRERELAERIVALRAQLEAAPAAHEPAAAAKPARGAAKQATAAASPQHAQLDALLAELGE
LQGETPMVPLQVDGGVVAEIVSAWTGVPLGRMVKDEIRTVRNLDSLLGERVIGQDHALAAIAQRVRTATAKLEDPNKPRG
VFLFVGPSGVGKTETALALADILYGGERKLITINMSEYQEAHSVSGLKGSPPGYVGYGEGGVLTEAVRRNPYSVVLLDEV
EKAHPDVLEMFFQVFDKGVMDDAEGREIDFRNTLIILTSNVGSSQIMQACLNKPAEEIPAADALAEALRPILMRSFKPAF
LGRLKVVPYYPISDDVLAQIIALKLGRIRDRLAANHKAAFHWDQSLVEAVLARCTEVDSGARNVDHILNGTLLPEIAESV
LAAMAEGGNINAIKVGAGKNGAFKYKLS

Specific function: Required for secretion of hcp1 probably by providing the energy source for its translocation [H]

COG id: COG0542

COG function: function code O; ATPases with chaperone activity, ATP-binding subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the clpA/clpB family [H]

Homologues:

Organism=Homo sapiens, GI13540606, Length=317, Percent_Identity=35.0157728706625, Blast_Score=177, Evalue=3e-44,
Organism=Escherichia coli, GI1788943, Length=650, Percent_Identity=42.3076923076923, Blast_Score=499, Evalue=1e-142,
Organism=Escherichia coli, GI1787109, Length=437, Percent_Identity=37.5286041189931, Blast_Score=241, Evalue=1e-64,
Organism=Saccharomyces cerevisiae, GI6320464, Length=705, Percent_Identity=39.4326241134752, Blast_Score=456, Evalue=1e-129,
Organism=Saccharomyces cerevisiae, GI6323002, Length=717, Percent_Identity=35.9832635983264, Blast_Score=430, Evalue=1e-121,

Paralogues:

None

Copy number: 560 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR013093
- InterPro:   IPR003959
- InterPro:   IPR017729
- InterPro:   IPR018368
- InterPro:   IPR001270
- InterPro:   IPR019489
- InterPro:   IPR023150 [H]

Pfam domain/function: PF00004 AAA; PF07724 AAA_2; PF10431 ClpB_D2-small [H]

EC number: NA

Molecular weight: Translated: 98296; Mature: 98165

Theoretical pI: Translated: 6.41; Mature: 6.41

Prosite motif: PS00870 CLPAB_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSINLKTLISKLDDTCRQAAERAANLCMARGNYEVDLEHLFLALLEQPQSDFVLIARRCG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCCCCEEHHHHCC
ISPETLERDLSEEVGRFKAGNTRTPVFSQHLPTLFEHAWLIASLDSETTRIRSGHLLLAL
CCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHEEECCCHHHHEECCCEEEEE
LTEPDLSQLAYRGSKQFVKIKLDALKHDFARLTEGSQEAGQSLRFADAGQADVGGDPVDG
ECCCCHHHHHHCCCCCEEEEEHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCC
LAGAPDGKGGLTKTPALDQFTTNLVQRARDAQIDPVIGRDGEIRQVIDILMRRRQNNPIL
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEE
TGEAGVGKTAVVEGLARRIAEKDVPDVLQGVELHVLDMGLLQAGASVKGEFENRLKNVID
ECCCCCCHHHHHHHHHHHHHHCCCHHHHCCCHHEEHHHHHHHCCCCCCHHHHHHHHHHHH
EVKKSPHPIILFIDEAHTMIGAGGTAGQNDAANLLKPALARGELRTIAATTWSEYKKYFE
HHHCCCCCEEEEEECCCHHEECCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
KDAALARRFQVVKVEEPSETLAAAMLRGMVPLMEKHFGIRVMDEAVTEAVRLSHRYISGR
HHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC
QLPDKAVSVLDTACAKVALGQSATPAIIEDTRKHLDRLAAELAALNRETSGGARHHDARV
CCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
AELLQAQESARKVLADNQTRLVRERELAERIVALRAQLEAAPAAHEPAAAAKPARGAAKQ
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHH
ATAAASPQHAQLDALLAELGELQGETPMVPLQVDGGVVAEIVSAWTGVPLGRMVKDEIRT
HHHCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHCCCCHHHHHHHHHHH
VRNLDSLLGERVIGQDHALAAIAQRVRTATAKLEDPNKPRGVFLFVGPSGVGKTETALAL
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHH
ADILYGGERKLITINMSEYQEAHSVSGLKGSPPGYVGYGEGGVLTEAVRRNPYSVVLLDE
HHHHHCCCEEEEEEEHHHHHHHHHCCCCCCCCCCEEECCCCCHHHHHHHCCCCEEEEECC
VEKAHPDVLEMFFQVFDKGVMDDAEGREIDFRNTLIILTSNVGSSQIMQACLNKPAEEIP
HHHCCHHHHHHHHHHHCCCCCCCCCCCEEECCCEEEEEECCCCHHHHHHHHHCCCHHHCC
AADALAEALRPILMRSFKPAFLGRLKVVPYYPISDDVLAQIIALKLGRIRDRLAANHKAA
HHHHHHHHHHHHHHHHCCHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCHH
FHWDQSLVEAVLARCTEVDSGARNVDHILNGTLLPEIAESVLAAMAEGGNINAIKVGAGK
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEEECCCC
NGAFKYKLS
CCCEEEECC
>Mature Secondary Structure 
SINLKTLISKLDDTCRQAAERAANLCMARGNYEVDLEHLFLALLEQPQSDFVLIARRCG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCCCCEEHHHHCC
ISPETLERDLSEEVGRFKAGNTRTPVFSQHLPTLFEHAWLIASLDSETTRIRSGHLLLAL
CCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHEEECCCHHHHEECCCEEEEE
LTEPDLSQLAYRGSKQFVKIKLDALKHDFARLTEGSQEAGQSLRFADAGQADVGGDPVDG
ECCCCHHHHHHCCCCCEEEEEHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCC
LAGAPDGKGGLTKTPALDQFTTNLVQRARDAQIDPVIGRDGEIRQVIDILMRRRQNNPIL
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEE
TGEAGVGKTAVVEGLARRIAEKDVPDVLQGVELHVLDMGLLQAGASVKGEFENRLKNVID
ECCCCCCHHHHHHHHHHHHHHCCCHHHHCCCHHEEHHHHHHHCCCCCCHHHHHHHHHHHH
EVKKSPHPIILFIDEAHTMIGAGGTAGQNDAANLLKPALARGELRTIAATTWSEYKKYFE
HHHCCCCCEEEEEECCCHHEECCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
KDAALARRFQVVKVEEPSETLAAAMLRGMVPLMEKHFGIRVMDEAVTEAVRLSHRYISGR
HHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC
QLPDKAVSVLDTACAKVALGQSATPAIIEDTRKHLDRLAAELAALNRETSGGARHHDARV
CCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
AELLQAQESARKVLADNQTRLVRERELAERIVALRAQLEAAPAAHEPAAAAKPARGAAKQ
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHH
ATAAASPQHAQLDALLAELGELQGETPMVPLQVDGGVVAEIVSAWTGVPLGRMVKDEIRT
HHHCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHCCCCHHHHHHHHHHH
VRNLDSLLGERVIGQDHALAAIAQRVRTATAKLEDPNKPRGVFLFVGPSGVGKTETALAL
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHH
ADILYGGERKLITINMSEYQEAHSVSGLKGSPPGYVGYGEGGVLTEAVRRNPYSVVLLDE
HHHHHCCCEEEEEEEHHHHHHHHHCCCCCCCCCCEEECCCCCHHHHHHHCCCCEEEEECC
VEKAHPDVLEMFFQVFDKGVMDDAEGREIDFRNTLIILTSNVGSSQIMQACLNKPAEEIP
HHHCCHHHHHHHHHHHCCCCCCCCCCCEEECCCEEEEEECCCCHHHHHHHHHCCCHHHCC
AADALAEALRPILMRSFKPAFLGRLKVVPYYPISDDVLAQIIALKLGRIRDRLAANHKAA
HHHHHHHHHHHHHHHHCCHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCHH
FHWDQSLVEAVLARCTEVDSGARNVDHILNGTLLPEIAESVLAAMAEGGNINAIKVGAGK
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEEECCCC
NGAFKYKLS
CCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Serine endopeptidases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]