Definition Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome.
Accession NC_007705
Length 4,940,217

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The map label for this gene is 84624944

Identifier: 84624944

GI number: 84624944

Start: 3738563

End: 3738916

Strand: Reverse

Name: 84624944

Synonym: XOO_3287

Alternate gene names: NA

Gene position: 3738916-3738563 (Counterclockwise)

Preceding gene: 84624945

Following gene: 84624943

Centisome position: 75.68

GC content: 66.38

Gene sequence:

>354_bases
ATGGATTTCTACGGATACAACCGCGCCAAAGCCATTGCCCATTGCGACAGCCTGGTCGTGGGACGGGCAAGCCGCCAGAC
CGACAGCCTTCGCAGCTGGAACAGCCTGCGTCCGGAGCACGTGGTCGAACTGCTGAGCAAGGCGTCCGCCGACGCGCGCG
CCGATGCGCGCGTGCTGGCCTCGTTGATGCAGCGCGCGTGCTGGCGCATCCATATGCAGGGGCCGACGCAGGGCAAGGCC
AACCAACTGGTCAGCAACGTGCGCGAAGTGGCGATCACAGCCGCCGGCCGCGAGTTCAAGCTGCAGTGCACCGAAAGCCC
GTCGCTGCAGCTCGAGCGCATCATCGCCGCCTGA

Upstream 100 bases:

>100_bases
AGGCGGCAACATCAACGCCATCAAAGTAGGCGCCGGCAAGAACGGCGCGTTCAAATACAAGTTATCCTGACCCCGCAGTC
CATCACCAAGGAGGAACACC

Downstream 100 bases:

>100_bases
GCCGCTTCACCACGCGCCACCCGCCAGGCCGCGCTCGCGCGGCCTTTGGCCGCTAGGCGCGGGGGGCCGATCTGTCATCG
CAAGGAGCCACCTATGGACC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 117; Mature: 117

Protein sequence:

>117_residues
MDFYGYNRAKAIAHCDSLVVGRASRQTDSLRSWNSLRPEHVVELLSKASADARADARVLASLMQRACWRIHMQGPTQGKA
NQLVSNVREVAITAAGREFKLQCTESPSLQLERIIAA

Sequences:

>Translated_117_residues
MDFYGYNRAKAIAHCDSLVVGRASRQTDSLRSWNSLRPEHVVELLSKASADARADARVLASLMQRACWRIHMQGPTQGKA
NQLVSNVREVAITAAGREFKLQCTESPSLQLERIIAA
>Mature_117_residues
MDFYGYNRAKAIAHCDSLVVGRASRQTDSLRSWNSLRPEHVVELLSKASADARADARVLASLMQRACWRIHMQGPTQGKA
NQLVSNVREVAITAAGREFKLQCTESPSLQLERIIAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12967; Mature: 12967

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFYGYNRAKAIAHCDSLVVGRASRQTDSLRSWNSLRPEHVVELLSKASADARADARVLA
CCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHH
SLMQRACWRIHMQGPTQGKANQLVSNVREVAITAAGREFKLQCTESPSLQLERIIAA
HHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHCC
>Mature Secondary Structure
MDFYGYNRAKAIAHCDSLVVGRASRQTDSLRSWNSLRPEHVVELLSKASADARADARVLA
CCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHH
SLMQRACWRIHMQGPTQGKANQLVSNVREVAITAAGREFKLQCTESPSLQLERIIAA
HHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA