Definition Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome.
Accession NC_007705
Length 4,940,217

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The map label for this gene is 84624874

Identifier: 84624874

GI number: 84624874

Start: 3648386

End: 3651226

Strand: Reverse

Name: 84624874

Synonym: XOO_3217

Alternate gene names: NA

Gene position: 3651226-3648386 (Counterclockwise)

Preceding gene: 84624875

Following gene: 84624873

Centisome position: 73.91

GC content: 66.35

Gene sequence:

>2841_bases
GTGTTGGCGGCCCTGGTACTGATTGCCGTGCCTGTGGGTGTAGTGGTGGCGCTGGTGTGGATTGCCCGGTTGCGGCGGCG
GGTGTCCTCGCTGGAGCAACGGCTTGCCCAGTGGCAGGCCGGCACTGCGGAGCGCGCGGATGCGCCAGCGTACGCGCAGG
GCAGGACGTGGGAGCGGCCCGAGGTGGTGTCCGATCTCGACGCCGGGCTAGTTTCCCGTGCGGACGGCAATGTGCCAGTG
TCCGGCACATCTGGCGCAGCTCAACGTGGCGAAAGCTGGCAGGTGGCTGCTGCTGCGGAGCAGAACGCGGTCGATGTGTC
CGTGGTGCCGCCACCGTTGCCTGCGCAGACCCCTGCAACTGCGATAGCGCGCGATGGAACCGCGATGTCGGAAGTTCCCG
GCCAGCACTCTCAGCCGGCGCAACCGCAACCAGCGCAACCGCAACCAGCGCAACCGCAACCTACACAGCCGCAGCCACCT
CAACGACCTCAGATTCCGTCCGAGCCCTGCGTCATCGTGCGTGCAGCCAGCGCATTGAAGCGTTGGTTCACCGAAGGCAA
TGTACCGGTCAAGGTCGGCATGCTGGTCCTGTTGGCAGGGGTGGCATCGCTGCTGAAGTACGCCAGCGACCAGGGCTGGA
TGCGGATGCCGATCGAGCTGCGCTTGGCCGGCATCAGCGTTCTCGCATTGGTCGGTCTGGTGTTTGGTTGGAAGCAACGC
GAGCAGCGACCGGGCTTTGCGTTGGCATTGCAGGGCGGCGCCATTGGCGGCTTGCTGTTGACGGTGTTCGCGGCCTTCAA
GTTGTACGCGTTGCTGGATGCTGGACCTGCGCTGGGCATCAGCGTGGTGCTGATCGCGGGCATGTGCGTGTTGGCCGTGT
TGCAGGATTCGCGCACGCTGGCGGTGCTGGGCGTGCTGGCCGGCTTCCTTGCGCCGATCGGGTTGTCCACCGGCAGCGGG
AATCATGTCGGGCTGTTTACCTATTACGCGATACTCAACGCTGGCATCGTGGCGATTGCGTGGCTGCGTCCGTGGCGCGT
GCTGAACCTGCTGGGGTTTGCGTTCACTTTCGGCATCGGCATTGTGTGGGGTGCGCTGCAATACACCCCGGCAAAATTCG
CCACCACCGAGCCGTTCCTGTTGCTGTTCTTCGCCATGTACGTGGCGATCCCGGTATTGCATGCGCGCCGCGGCGACGGC
AGTGCAGGCAAGGTCATCGATGGCAGCCTGTTGTTCGGGACACCGCTGGTGGCCTTCGCGTTGCAGGCAGGCCTGCTTGA
GGGCGATCAGCTGCCGCTCGCGTTGTGCGCGGTGGTGGTGGCCGCGGTGTATGCAGGCCTGGCAAGCTGGTTGTTGCGCC
GGGCTCCCACGCGCTTGCTGGGCCAGGCGCACGCGATGCTGGCGGTCGGCTTCGCCACCCTGGCGATTCCGCTGGCATTG
TCGGCACGTGCCACTGCGAGCGTGTTCGCGCTGGAAGGCGTCGGCCTGTTGTGGCTGGGCTTACGCCAGCAACGGCGGAT
CCCTCAGATCAGCGGCGTGGCGCTGCAGTTGCTCGCGGCGGTAGGTGTCGCCTTCGGTGTGGATGCCTGGCGCTACGACG
CGGTAGCGGTGGCCAACGCGACCTGCATGAGCACGTTGCTGATCGCGCTTTCTGGCTGGGTGAGCGCCTGGTTCATGCGC
GATGCAGGGCATCCACGGTGTGCGCTGGTGGCGTATCTGTGGGGGCTGGGCTGGTCGACGTTCTGCGGTGTGCACGAGAT
CCTGCGCTTTGCCGATCTGTGCAGCGAACCAGATCTGCTGCTGGGCTTTGTCGCACTCAGCCTGTGGCTGGCTGCAGAAG
TGCATCGCCGGCGTCCCGCAACGGCGTTGGTGTGGACGGTGATGTCGGGTCTGGTGCTGGCAGCGCCATTGGCACTGTGG
CAGGGCCAAGCGCATACCCAGCCGTTCGCGCATTGGGGCGCGCTGGCGTGGGGTGTGTTTGCGGTGGCGGGCGCACGAGC
GCTGTGGTGCCTGCGTACGCAGCAAGGCGCTGGCGCGATGGCGGCGCAGTTCATCTGGTGGCTGCTGTGGCCATTGGTGG
TGGCGTTGGGTGCAGCCTGGTGGGCCGATGCGTTCTTGCTGGCGAATGGCTGGCGTTGTGCCTTGCTGGCGGCGCCTTGG
CTGGTCGTGGCGAGCCTGGGATTATTGCGTTGGCCCTGGCTGGCATGGCCGCAGGGCGCCAGCTTCGATCCTGCACGCAA
CGCGTTGCTGAGTTGCGTGTTCGCGGTGCTGGGCATCGGCTGGCTATTGGTGTTGCTGGACCCGGTGAGCGCGGCACCGT
TGCCGTGGTTGCCGCTGCTGAATCCGGCCGAGCTGGCGCAACTGGCGGTGCTGGCCTTGCTCGCGCGCTGGGCCTGGTCG
GTACCGGCGCCGGCATTGCTGCAGCGTTGGCGCGTGACCGCGCTTGGTGTGCTCGGCTGGGCATTGATCACCGGCAGCAC
CTTCCACAGCGTGCATCACTGGGGCGGCGTGCCGTGGGATTCTGCGTTGATCGGCGCCACCTTGTCGCAGACCAGCCTCA
CCATCGTGTGGAGCGTGCTGGGCGTGCTGGGCTGGGTGATCGGCTCGCGTCGCGGGCAGCGTGGGTTGTGGCTGGGCGGC
GCGTTGCTCATGGGTCTGGTGCTGGCGAAGCTGGTGTTGGTCGACCGCCAGCATCTGGGCAACTTGCTCGGCATCGGCTC
GTTCATGGCCTATGGTCTGTTGTGCACCGTAGTGGGTTACCTGGCGCCGGCACCGCCGCGTCCGCTGGCGACAGAAGCGA
CTGCTGTCGAAGACGACGGCGTCGAAAAGGAGCAGGCATGA

Upstream 100 bases:

>100_bases
TCTGATCGAGAGGTCGGCTGCCCAGTCGTGGCCTGAAGCTGTATGGTTCGCGCATTCGGCTGGACGCCGGCTCGGGGTTG
GTGCGTTGGAAACGATAATC

Downstream 100 bases:

>100_bases
AATCGATGCGATGGGCGCTACTGGTGATGGTGCCGATGCTGGCGCATGCCGCTGATGTGCGGCAGGACTACCGCCAGCAG
TGGCCGCTGCAGGTAACTGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 946; Mature: 946

Protein sequence:

>946_residues
MLAALVLIAVPVGVVVALVWIARLRRRVSSLEQRLAQWQAGTAERADAPAYAQGRTWERPEVVSDLDAGLVSRADGNVPV
SGTSGAAQRGESWQVAAAAEQNAVDVSVVPPPLPAQTPATAIARDGTAMSEVPGQHSQPAQPQPAQPQPAQPQPTQPQPP
QRPQIPSEPCVIVRAASALKRWFTEGNVPVKVGMLVLLAGVASLLKYASDQGWMRMPIELRLAGISVLALVGLVFGWKQR
EQRPGFALALQGGAIGGLLLTVFAAFKLYALLDAGPALGISVVLIAGMCVLAVLQDSRTLAVLGVLAGFLAPIGLSTGSG
NHVGLFTYYAILNAGIVAIAWLRPWRVLNLLGFAFTFGIGIVWGALQYTPAKFATTEPFLLLFFAMYVAIPVLHARRGDG
SAGKVIDGSLLFGTPLVAFALQAGLLEGDQLPLALCAVVVAAVYAGLASWLLRRAPTRLLGQAHAMLAVGFATLAIPLAL
SARATASVFALEGVGLLWLGLRQQRRIPQISGVALQLLAAVGVAFGVDAWRYDAVAVANATCMSTLLIALSGWVSAWFMR
DAGHPRCALVAYLWGLGWSTFCGVHEILRFADLCSEPDLLLGFVALSLWLAAEVHRRRPATALVWTVMSGLVLAAPLALW
QGQAHTQPFAHWGALAWGVFAVAGARALWCLRTQQGAGAMAAQFIWWLLWPLVVALGAAWWADAFLLANGWRCALLAAPW
LVVASLGLLRWPWLAWPQGASFDPARNALLSCVFAVLGIGWLLVLLDPVSAAPLPWLPLLNPAELAQLAVLALLARWAWS
VPAPALLQRWRVTALGVLGWALITGSTFHSVHHWGGVPWDSALIGATLSQTSLTIVWSVLGVLGWVIGSRRGQRGLWLGG
ALLMGLVLAKLVLVDRQHLGNLLGIGSFMAYGLLCTVVGYLAPAPPRPLATEATAVEDDGVEKEQA

Sequences:

>Translated_946_residues
MLAALVLIAVPVGVVVALVWIARLRRRVSSLEQRLAQWQAGTAERADAPAYAQGRTWERPEVVSDLDAGLVSRADGNVPV
SGTSGAAQRGESWQVAAAAEQNAVDVSVVPPPLPAQTPATAIARDGTAMSEVPGQHSQPAQPQPAQPQPAQPQPTQPQPP
QRPQIPSEPCVIVRAASALKRWFTEGNVPVKVGMLVLLAGVASLLKYASDQGWMRMPIELRLAGISVLALVGLVFGWKQR
EQRPGFALALQGGAIGGLLLTVFAAFKLYALLDAGPALGISVVLIAGMCVLAVLQDSRTLAVLGVLAGFLAPIGLSTGSG
NHVGLFTYYAILNAGIVAIAWLRPWRVLNLLGFAFTFGIGIVWGALQYTPAKFATTEPFLLLFFAMYVAIPVLHARRGDG
SAGKVIDGSLLFGTPLVAFALQAGLLEGDQLPLALCAVVVAAVYAGLASWLLRRAPTRLLGQAHAMLAVGFATLAIPLAL
SARATASVFALEGVGLLWLGLRQQRRIPQISGVALQLLAAVGVAFGVDAWRYDAVAVANATCMSTLLIALSGWVSAWFMR
DAGHPRCALVAYLWGLGWSTFCGVHEILRFADLCSEPDLLLGFVALSLWLAAEVHRRRPATALVWTVMSGLVLAAPLALW
QGQAHTQPFAHWGALAWGVFAVAGARALWCLRTQQGAGAMAAQFIWWLLWPLVVALGAAWWADAFLLANGWRCALLAAPW
LVVASLGLLRWPWLAWPQGASFDPARNALLSCVFAVLGIGWLLVLLDPVSAAPLPWLPLLNPAELAQLAVLALLARWAWS
VPAPALLQRWRVTALGVLGWALITGSTFHSVHHWGGVPWDSALIGATLSQTSLTIVWSVLGVLGWVIGSRRGQRGLWLGG
ALLMGLVLAKLVLVDRQHLGNLLGIGSFMAYGLLCTVVGYLAPAPPRPLATEATAVEDDGVEKEQA
>Mature_946_residues
MLAALVLIAVPVGVVVALVWIARLRRRVSSLEQRLAQWQAGTAERADAPAYAQGRTWERPEVVSDLDAGLVSRADGNVPV
SGTSGAAQRGESWQVAAAAEQNAVDVSVVPPPLPAQTPATAIARDGTAMSEVPGQHSQPAQPQPAQPQPAQPQPTQPQPP
QRPQIPSEPCVIVRAASALKRWFTEGNVPVKVGMLVLLAGVASLLKYASDQGWMRMPIELRLAGISVLALVGLVFGWKQR
EQRPGFALALQGGAIGGLLLTVFAAFKLYALLDAGPALGISVVLIAGMCVLAVLQDSRTLAVLGVLAGFLAPIGLSTGSG
NHVGLFTYYAILNAGIVAIAWLRPWRVLNLLGFAFTFGIGIVWGALQYTPAKFATTEPFLLLFFAMYVAIPVLHARRGDG
SAGKVIDGSLLFGTPLVAFALQAGLLEGDQLPLALCAVVVAAVYAGLASWLLRRAPTRLLGQAHAMLAVGFATLAIPLAL
SARATASVFALEGVGLLWLGLRQQRRIPQISGVALQLLAAVGVAFGVDAWRYDAVAVANATCMSTLLIALSGWVSAWFMR
DAGHPRCALVAYLWGLGWSTFCGVHEILRFADLCSEPDLLLGFVALSLWLAAEVHRRRPATALVWTVMSGLVLAAPLALW
QGQAHTQPFAHWGALAWGVFAVAGARALWCLRTQQGAGAMAAQFIWWLLWPLVVALGAAWWADAFLLANGWRCALLAAPW
LVVASLGLLRWPWLAWPQGASFDPARNALLSCVFAVLGIGWLLVLLDPVSAAPLPWLPLLNPAELAQLAVLALLARWAWS
VPAPALLQRWRVTALGVLGWALITGSTFHSVHHWGGVPWDSALIGATLSQTSLTIVWSVLGVLGWVIGSRRGQRGLWLGG
ALLMGLVLAKLVLVDRQHLGNLLGIGSFMAYGLLCTVVGYLAPAPPRPLATEATAVEDDGVEKEQA

Specific function: Unknown

COG id: COG5373

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 100301; Mature: 100301

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAALVLIAVPVGVVVALVWIARLRRRVSSLEQRLAQWQAGTAERADAPAYAQGRTWERP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
EVVSDLDAGLVSRADGNVPVSGTSGAAQRGESWQVAAAAEQNAVDVSVVPPPLPAQTPAT
HHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCEEEEECCCCCEEEEECCCCCCCCCCCH
AIARDGTAMSEVPGQHSQPAQPQPAQPQPAQPQPTQPQPPQRPQIPSEPCVIVRAASALK
HHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
RWFTEGNVPVKVGMLVLLAGVASLLKYASDQGWMRMPIELRLAGISVLALVGLVFGWKQR
HHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHH
EQRPGFALALQGGAIGGLLLTVFAAFKLYALLDAGPALGISVVLIAGMCVLAVLQDSRTL
HCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHH
AVLGVLAGFLAPIGLSTGSGNHVGLFTYYAILNAGIVAIAWLRPWRVLNLLGFAFTFGIG
HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
IVWGALQYTPAKFATTEPFLLLFFAMYVAIPVLHARRGDGSAGKVIDGSLLFGTPLVAFA
HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCHHHHHHHHHHH
LQAGLLEGDQLPLALCAVVVAAVYAGLASWLLRRAPTRLLGQAHAMLAVGFATLAIPLAL
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
SARATASVFALEGVGLLWLGLRQQRRIPQISGVALQLLAAVGVAFGVDAWRYDAVAVANA
HHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
TCMSTLLIALSGWVSAWFMRDAGHPRCALVAYLWGLGWSTFCGVHEILRFADLCSEPDLL
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHH
LGFVALSLWLAAEVHRRRPATALVWTVMSGLVLAAPLALWQGQAHTQPFAHWGALAWGVF
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
AVAGARALWCLRTQQGAGAMAAQFIWWLLWPLVVALGAAWWADAFLLANGWRCALLAAPW
HHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
LVVASLGLLRWPWLAWPQGASFDPARNALLSCVFAVLGIGWLLVLLDPVSAAPLPWLPLL
HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
NPAELAQLAVLALLARWAWSVPAPALLQRWRVTALGVLGWALITGSTFHSVHHWGGVPWD
CHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCC
SALIGATLSQTSLTIVWSVLGVLGWVIGSRRGQRGLWLGGALLMGLVLAKLVLVDRQHLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHH
NLLGIGSFMAYGLLCTVVGYLAPAPPRPLATEATAVEDDGVEKEQA
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLAALVLIAVPVGVVVALVWIARLRRRVSSLEQRLAQWQAGTAERADAPAYAQGRTWERP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
EVVSDLDAGLVSRADGNVPVSGTSGAAQRGESWQVAAAAEQNAVDVSVVPPPLPAQTPAT
HHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCEEEEECCCCCEEEEECCCCCCCCCCCH
AIARDGTAMSEVPGQHSQPAQPQPAQPQPAQPQPTQPQPPQRPQIPSEPCVIVRAASALK
HHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
RWFTEGNVPVKVGMLVLLAGVASLLKYASDQGWMRMPIELRLAGISVLALVGLVFGWKQR
HHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHH
EQRPGFALALQGGAIGGLLLTVFAAFKLYALLDAGPALGISVVLIAGMCVLAVLQDSRTL
HCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHH
AVLGVLAGFLAPIGLSTGSGNHVGLFTYYAILNAGIVAIAWLRPWRVLNLLGFAFTFGIG
HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
IVWGALQYTPAKFATTEPFLLLFFAMYVAIPVLHARRGDGSAGKVIDGSLLFGTPLVAFA
HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCHHHHHHHHHHH
LQAGLLEGDQLPLALCAVVVAAVYAGLASWLLRRAPTRLLGQAHAMLAVGFATLAIPLAL
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
SARATASVFALEGVGLLWLGLRQQRRIPQISGVALQLLAAVGVAFGVDAWRYDAVAVANA
HHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
TCMSTLLIALSGWVSAWFMRDAGHPRCALVAYLWGLGWSTFCGVHEILRFADLCSEPDLL
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHH
LGFVALSLWLAAEVHRRRPATALVWTVMSGLVLAAPLALWQGQAHTQPFAHWGALAWGVF
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
AVAGARALWCLRTQQGAGAMAAQFIWWLLWPLVVALGAAWWADAFLLANGWRCALLAAPW
HHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
LVVASLGLLRWPWLAWPQGASFDPARNALLSCVFAVLGIGWLLVLLDPVSAAPLPWLPLL
HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
NPAELAQLAVLALLARWAWSVPAPALLQRWRVTALGVLGWALITGSTFHSVHHWGGVPWD
CHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCC
SALIGATLSQTSLTIVWSVLGVLGWVIGSRRGQRGLWLGGALLMGLVLAKLVLVDRQHLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHH
NLLGIGSFMAYGLLCTVVGYLAPAPPRPLATEATAVEDDGVEKEQA
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA