| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84624873
Identifier: 84624873
GI number: 84624873
Start: 3647031
End: 3648389
Strand: Reverse
Name: 84624873
Synonym: XOO_3216
Alternate gene names: NA
Gene position: 3648389-3647031 (Counterclockwise)
Preceding gene: 84624874
Following gene: 84624872
Centisome position: 73.85
GC content: 69.17
Gene sequence:
>1359_bases ATGAAATCGATGCGATGGGCGCTACTGGTGATGGTGCCGATGCTGGCGCATGCCGCTGATGTGCGGCAGGACTACCGCCA GCAGTGGCCGCTGCAGGTAACTGGCTCGGATGCCGGCATCTATCAGTTGACCTTGAACGCGGCGGTGTATCGCTCCGCGC ACGACGCGGCGCTGCGCGATGTCACGGTGATCGATGCGCGTGGCGAAGAGCTGCCCGCCGCCTGGTTGCCCGCGGATGCA GCATCGGCGGCTGCGGCGCGCCGGCAGCGCCTCCCCCTCTTTGCGGTGCCGGCCGGTGCGGCGCCGGCCAATGGCGATCT GCAACTGATCGCCGAGCGCGATGCCAGCGGTGCGGTACGTCGTCTCGAAGGCCGCGTTGTGACCGGGGCTGCCGCCGCTG CAGGCAACGGTGGGAGCTGGTTGATCGATGCCAGCGCATTGCGCGATCGCCCGCGTGCCCTGCTGCTGGATTGGGACGGC GACATGCCGGTGCAGGCTCAGTTGCGCGTGGAAGGCAGCGACGATCTGCGCGACTGGCGCGTGCTTGCTTCAGACGCTAC GGTGATGGCGCTGGACAATCAGACGCGGCGATTGCAGCAGCGCCGGATCGCACTCGATGAGGGCGCGCGTTATCTGCGCC TGGTGCCGGTGTCGGGCCAGTTGCCGGCGTTGCGCGTGGTCGAGGCGGAGCTGGAGGGCATCACCGCGCCCGCACCGCTG CAGTGGCTTGAATTGCCAGGCACCGCGAAAGATGCAGCGGTGGTGTATGCCCTGCCGGGACGCTTTCCGATCACTCGGCT CGATGTCGGTGGCAGTCAGGCCGAGGCCGTCGAGTGGATCGTGGCAAGTCGTGATGCCGATGATGCGCCATGGGTACAGC GTGCCGGCCCCTGGTTGGCGTATCGGCTGGGCAAGGGGGCGGCCGCCGCGTCGCCGCCGCAACTTCTGTCTGCCCCAGTG CGCGATCGCCAATGGCGGCTGGTCGCTGCGCAAGGGCGCAGCACTGCGGTGCCGAGCTTGCGCGTGGGGTATCAGCCCGA GCGGCTTATGTTTCTCGCTCAGGGCCAGCCGCCGTATGCGCTGGTCGCCGGCAGTGCGCGTGCGCACCGCGGCGACGCAC CGCTGGCCTCGATGCTGCAGGCACTGCGGCGCGAACGCGGCGCGCAGTGGCAACCGGCGCAGGCCAACGTCGCTGCGCAG GCACAGCCGCTGGCGGGCGAGGCCGCGCTGCGACCGGCCGCCACGCCGCGTGACTGGAAACGTTGGCTGCTGTGGGGCCT GTTGGTCGGTGGTGCCTTGCTGGTCAGTGGTTTCGCGGTGAGTCTGCTGCGCAGTGCATCGGCCAATCGCAACGGCTAA
Upstream 100 bases:
>100_bases TGTTGTGCACCGTAGTGGGTTACCTGGCGCCGGCACCGCCGCGTCCGCTGGCGACAGAAGCGACTGCTGTCGAAGACGAC GGCGTCGAAAAGGAGCAGGC
Downstream 100 bases:
>100_bases GCGCACCCGCGTCGCGCGGCGGTTTGCCGCTGCGGCGCGAAGGTCGGACAATAGACGTCCCTCGTGACCCAGGCAGCCGT ATTGCCCGTCGTGTTCGACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 452; Mature: 452
Protein sequence:
>452_residues MKSMRWALLVMVPMLAHAADVRQDYRQQWPLQVTGSDAGIYQLTLNAAVYRSAHDAALRDVTVIDARGEELPAAWLPADA ASAAAARRQRLPLFAVPAGAAPANGDLQLIAERDASGAVRRLEGRVVTGAAAAAGNGGSWLIDASALRDRPRALLLDWDG DMPVQAQLRVEGSDDLRDWRVLASDATVMALDNQTRRLQQRRIALDEGARYLRLVPVSGQLPALRVVEAELEGITAPAPL QWLELPGTAKDAAVVYALPGRFPITRLDVGGSQAEAVEWIVASRDADDAPWVQRAGPWLAYRLGKGAAAASPPQLLSAPV RDRQWRLVAAQGRSTAVPSLRVGYQPERLMFLAQGQPPYALVAGSARAHRGDAPLASMLQALRRERGAQWQPAQANVAAQ AQPLAGEAALRPAATPRDWKRWLLWGLLVGGALLVSGFAVSLLRSASANRNG
Sequences:
>Translated_452_residues MKSMRWALLVMVPMLAHAADVRQDYRQQWPLQVTGSDAGIYQLTLNAAVYRSAHDAALRDVTVIDARGEELPAAWLPADA ASAAAARRQRLPLFAVPAGAAPANGDLQLIAERDASGAVRRLEGRVVTGAAAAAGNGGSWLIDASALRDRPRALLLDWDG DMPVQAQLRVEGSDDLRDWRVLASDATVMALDNQTRRLQQRRIALDEGARYLRLVPVSGQLPALRVVEAELEGITAPAPL QWLELPGTAKDAAVVYALPGRFPITRLDVGGSQAEAVEWIVASRDADDAPWVQRAGPWLAYRLGKGAAAASPPQLLSAPV RDRQWRLVAAQGRSTAVPSLRVGYQPERLMFLAQGQPPYALVAGSARAHRGDAPLASMLQALRRERGAQWQPAQANVAAQ AQPLAGEAALRPAATPRDWKRWLLWGLLVGGALLVSGFAVSLLRSASANRNG >Mature_452_residues MKSMRWALLVMVPMLAHAADVRQDYRQQWPLQVTGSDAGIYQLTLNAAVYRSAHDAALRDVTVIDARGEELPAAWLPADA ASAAAARRQRLPLFAVPAGAAPANGDLQLIAERDASGAVRRLEGRVVTGAAAAAGNGGSWLIDASALRDRPRALLLDWDG DMPVQAQLRVEGSDDLRDWRVLASDATVMALDNQTRRLQQRRIALDEGARYLRLVPVSGQLPALRVVEAELEGITAPAPL QWLELPGTAKDAAVVYALPGRFPITRLDVGGSQAEAVEWIVASRDADDAPWVQRAGPWLAYRLGKGAAAASPPQLLSAPV RDRQWRLVAAQGRSTAVPSLRVGYQPERLMFLAQGQPPYALVAGSARAHRGDAPLASMLQALRRERGAQWQPAQANVAAQ AQPLAGEAALRPAATPRDWKRWLLWGLLVGGALLVSGFAVSLLRSASANRNG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48485; Mature: 48485
Theoretical pI: Translated: 10.43; Mature: 10.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSMRWALLVMVPMLAHAADVRQDYRQQWPLQVTGSDAGIYQLTLNAAVYRSAHDAALRD CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEEEECHHHHHCHHHHHHCE VTVIDARGEELPAAWLPADAASAAAARRQRLPLFAVPAGAAPANGDLQLIAERDASGAVR EEEEECCCCCCCCEECCCCHHHHHHHHHHCCCEEEECCCCCCCCCCEEEEEECCCCCHHH RLEGRVVTGAAAAAGNGGSWLIDASALRDRPRALLLDWDGDMPVQAQLRVEGSDDLRDWR HHCCEEEEEEHHCCCCCCCEEEEHHHHCCCCCEEEEECCCCCCEEEEEEECCCCCCCHHE VLASDATVMALDNQTRRLQQRRIALDEGARYLRLVPVSGQLPALRVVEAELEGITAPAPL EEECCCEEEEECCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCEEEEEHHHCCCCCCCCC QWLELPGTAKDAAVVYALPGRFPITRLDVGGSQAEAVEWIVASRDADDAPWVQRAGPWLA EEEECCCCCCCCEEEEEECCCCCEEEEECCCCHHHHHEEEEECCCCCCCCHHHHCCCEEE YRLGKGAAAASPPQLLSAPVRDRQWRLVAAQGRSTAVPSLRVGYQPERLMFLAQGQPPYA EEECCCCCCCCCHHHHCCCCCCCEEEEEEECCCCCCCCCEECCCCCCCEEEEECCCCCEE LVAGSARAHRGDAPLASMLQALRRERGAQWQPAQANVAAQAQPLAGEAALRPAATPRDWK EEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCHHCCCCCCCHHHH RWLLWGLLVGGALLVSGFAVSLLRSASANRNG HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MKSMRWALLVMVPMLAHAADVRQDYRQQWPLQVTGSDAGIYQLTLNAAVYRSAHDAALRD CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEEEECHHHHHCHHHHHHCE VTVIDARGEELPAAWLPADAASAAAARRQRLPLFAVPAGAAPANGDLQLIAERDASGAVR EEEEECCCCCCCCEECCCCHHHHHHHHHHCCCEEEECCCCCCCCCCEEEEEECCCCCHHH RLEGRVVTGAAAAAGNGGSWLIDASALRDRPRALLLDWDGDMPVQAQLRVEGSDDLRDWR HHCCEEEEEEHHCCCCCCCEEEEHHHHCCCCCEEEEECCCCCCEEEEEEECCCCCCCHHE VLASDATVMALDNQTRRLQQRRIALDEGARYLRLVPVSGQLPALRVVEAELEGITAPAPL EEECCCEEEEECCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCEEEEEHHHCCCCCCCCC QWLELPGTAKDAAVVYALPGRFPITRLDVGGSQAEAVEWIVASRDADDAPWVQRAGPWLA EEEECCCCCCCCEEEEEECCCCCEEEEECCCCHHHHHEEEEECCCCCCCCHHHHCCCEEE YRLGKGAAAASPPQLLSAPVRDRQWRLVAAQGRSTAVPSLRVGYQPERLMFLAQGQPPYA EEECCCCCCCCCHHHHCCCCCCCEEEEEEECCCCCCCCCEECCCCCCCEEEEECCCCCEE LVAGSARAHRGDAPLASMLQALRRERGAQWQPAQANVAAQAQPLAGEAALRPAATPRDWK EEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCHHCCCCCCCHHHH RWLLWGLLVGGALLVSGFAVSLLRSASANRNG HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA