| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84624869
Identifier: 84624869
GI number: 84624869
Start: 3641571
End: 3642575
Strand: Reverse
Name: 84624869
Synonym: XOO_3212
Alternate gene names: NA
Gene position: 3642575-3641571 (Counterclockwise)
Preceding gene: 84624870
Following gene: 84624864
Centisome position: 73.73
GC content: 62.99
Gene sequence:
>1005_bases ATGAGCATCGAACAGCTTGCCGAAACCGCCCAGGCCATGGTCGCCCCGGGTAAGGGCATCATCGCCATCGACGAATCGAC CAGCACGATCGCCAAGCGTTTTGCCAGCGTCGGCATCGAGAACATCGAAGAAAACCGTCGCGCCTACCGCGAACTGTTGC TGACCACGCCCAAGCTGAGCGACTACATCTCCGGCGCCATCTTGTTCGACGAGACCATCCGCCAGAAGACCAAGGATGGC GTGCCGTTCGCCGAGTACATGACCGCCCACGGCATCATTCCGGGCATCAAGGTCGACAAGGGCGCGCAGCCGCTGGCCGG CATGCCGGGCGAGCTGGTCACCGAAGGCCTGGACGGCCTGCGTGCACGTCTGGAGGAGTACTACACGCTGGGCGCGCGCT TCGCCAAGTGGCGTGCGGTGATCACCATCGGCGAAGACATCCCGTCCGGCACCTGCATCGAGGCCAACTCGCATGCGCTG GCGCGTTATGCCGCGTTGTGCCAGGAGCAGGGCCTGGTGCCGATGGTCGAGCCGGAAGTGATCATGGACGGCAGCCACGA CATCGAAACCTGCTACGAAGTCACCGAAGCGACGCTGCGCTCGCTGTTCGGCGCACTGTATGAGCAGAACGTCGTGCTCG AAGGCACCATCCTGAAGGCATCGATGGTCATCTCCGGCAAGAGCTGCGAAGAGCAGGCCAGCATCGAAGAGGTGGCCGAG TCCACGGTAATGTGCCTGAAGTCGACCGTGCCGGCGATCCTGCCGGGTATCGTGTTCCTGTCCGGCGGCCAGACCGACGA GCAGTCCACTGCGCATCTCAATGAAATGCACCAGCTCGGCACTCTGCCGTGGCCGCTGAGCTTCTCCTACGGGCGTGCCA TGCAGCAGGCTGCACTGAAGCTGTGGGCCAAGGACATGACCGTCAACTTCGCCAAGGCGCAGCAGGTCATTTACGAGCGC GCCAAGGAAAATGGCCTGGCCGCGCTGGGTAAGTGGAAGGGTTGA
Upstream 100 bases:
>100_bases ACGCGTATCACGTGTAATCGGTTGCAGACATTCCGTGAAGGAATGTCGACGAGTTTCGTCGCTATACTTTCGTTCTCCCC GCAGCTGCCACAGGAACTAC
Downstream 100 bases:
>100_bases TCGATTGATGACGGCTGCAAGGCCGTTGCATCGCTGAAAACGAAAACGCCGGCAGCGATGCCGGCGTTTTTGCGTGTGGC ATCTATGCGTTGAGCAGGAT
Product: fructose-bisphosphate aldolase
Products: NA
Alternate protein names: Fructose-biphosphate aldolase class I; FBP aldolase [H]
Number of amino acids: Translated: 334; Mature: 333
Protein sequence:
>334_residues MSIEQLAETAQAMVAPGKGIIAIDESTSTIAKRFASVGIENIEENRRAYRELLLTTPKLSDYISGAILFDETIRQKTKDG VPFAEYMTAHGIIPGIKVDKGAQPLAGMPGELVTEGLDGLRARLEEYYTLGARFAKWRAVITIGEDIPSGTCIEANSHAL ARYAALCQEQGLVPMVEPEVIMDGSHDIETCYEVTEATLRSLFGALYEQNVVLEGTILKASMVISGKSCEEQASIEEVAE STVMCLKSTVPAILPGIVFLSGGQTDEQSTAHLNEMHQLGTLPWPLSFSYGRAMQQAALKLWAKDMTVNFAKAQQVIYER AKENGLAALGKWKG
Sequences:
>Translated_334_residues MSIEQLAETAQAMVAPGKGIIAIDESTSTIAKRFASVGIENIEENRRAYRELLLTTPKLSDYISGAILFDETIRQKTKDG VPFAEYMTAHGIIPGIKVDKGAQPLAGMPGELVTEGLDGLRARLEEYYTLGARFAKWRAVITIGEDIPSGTCIEANSHAL ARYAALCQEQGLVPMVEPEVIMDGSHDIETCYEVTEATLRSLFGALYEQNVVLEGTILKASMVISGKSCEEQASIEEVAE STVMCLKSTVPAILPGIVFLSGGQTDEQSTAHLNEMHQLGTLPWPLSFSYGRAMQQAALKLWAKDMTVNFAKAQQVIYER AKENGLAALGKWKG >Mature_333_residues SIEQLAETAQAMVAPGKGIIAIDESTSTIAKRFASVGIENIEENRRAYRELLLTTPKLSDYISGAILFDETIRQKTKDGV PFAEYMTAHGIIPGIKVDKGAQPLAGMPGELVTEGLDGLRARLEEYYTLGARFAKWRAVITIGEDIPSGTCIEANSHALA RYAALCQEQGLVPMVEPEVIMDGSHDIETCYEVTEATLRSLFGALYEQNVVLEGTILKASMVISGKSCEEQASIEEVAES TVMCLKSTVPAILPGIVFLSGGQTDEQSTAHLNEMHQLGTLPWPLSFSYGRAMQQAALKLWAKDMTVNFAKAQQVIYERA KENGLAALGKWKG
Specific function: Unknown
COG id: COG3588
COG function: function code G; Fructose-1,6-bisphosphate aldolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class I fructose-bisphosphate aldolase family [H]
Homologues:
Organism=Homo sapiens, GI34577112, Length=331, Percent_Identity=49.5468277945619, Blast_Score=326, Evalue=2e-89, Organism=Homo sapiens, GI34577110, Length=331, Percent_Identity=49.5468277945619, Blast_Score=326, Evalue=2e-89, Organism=Homo sapiens, GI4557305, Length=331, Percent_Identity=49.5468277945619, Blast_Score=326, Evalue=2e-89, Organism=Homo sapiens, GI193794814, Length=331, Percent_Identity=49.5468277945619, Blast_Score=326, Evalue=2e-89, Organism=Homo sapiens, GI4885063, Length=333, Percent_Identity=47.1471471471471, Blast_Score=317, Evalue=9e-87, Organism=Homo sapiens, GI40354205, Length=332, Percent_Identity=46.6867469879518, Blast_Score=298, Evalue=4e-81, Organism=Caenorhabditis elegans, GI25150450, Length=335, Percent_Identity=50.1492537313433, Blast_Score=323, Evalue=1e-88, Organism=Caenorhabditis elegans, GI71983985, Length=332, Percent_Identity=48.4939759036145, Blast_Score=310, Evalue=8e-85, Organism=Caenorhabditis elegans, GI71983990, Length=235, Percent_Identity=47.6595744680851, Blast_Score=224, Evalue=5e-59, Organism=Drosophila melanogaster, GI24650282, Length=331, Percent_Identity=50.1510574018127, Blast_Score=327, Evalue=5e-90, Organism=Drosophila melanogaster, GI24650280, Length=331, Percent_Identity=50.1510574018127, Blast_Score=327, Evalue=5e-90, Organism=Drosophila melanogaster, GI24650278, Length=331, Percent_Identity=50.1510574018127, Blast_Score=327, Evalue=5e-90, Organism=Drosophila melanogaster, GI221459619, Length=331, Percent_Identity=49.8489425981873, Blast_Score=326, Evalue=2e-89, Organism=Drosophila melanogaster, GI24650288, Length=331, Percent_Identity=49.8489425981873, Blast_Score=326, Evalue=2e-89, Organism=Drosophila melanogaster, GI45553577, Length=329, Percent_Identity=49.5440729483283, Blast_Score=320, Evalue=7e-88, Organism=Drosophila melanogaster, GI24650304, Length=331, Percent_Identity=41.6918429003021, Blast_Score=291, Evalue=4e-79,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000741 - InterPro: IPR013785 [H]
Pfam domain/function: PF00274 Glycolytic [H]
EC number: =4.1.2.13 [H]
Molecular weight: Translated: 36292; Mature: 36161
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIEQLAETAQAMVAPGKGIIAIDESTSTIAKRFASVGIENIEENRRAYRELLLTTPKLS CCHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCHH DYISGAILFDETIRQKTKDGVPFAEYMTAHGIIPGIKVDKGAQPLAGMPGELVTEGLDGL HHHCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCEECCCCCCCCCCCHHHHHHHHHHH RARLEEYYTLGARFAKWRAVITIGEDIPSGTCIEANSHALARYAALCQEQGLVPMVEPEV HHHHHHHHHHHHHHHHHEEEEEECCCCCCCCEEECCCHHHHHHHHHHHHCCCCCCCCCCE IMDGSHDIETCYEVTEATLRSLFGALYEQNVVLEGTILKASMVISGKSCEEQASIEEVAE EECCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEEEEEECCCCCHHHHHHHHHHH STVMCLKSTVPAILPGIVFLSGGQTDEQSTAHLNEMHQLGTLPWPLSFSYGRAMQQAALK HHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH LWAKDMTVNFAKAQQVIYERAKENGLAALGKWKG HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure SIEQLAETAQAMVAPGKGIIAIDESTSTIAKRFASVGIENIEENRRAYRELLLTTPKLS CHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCHH DYISGAILFDETIRQKTKDGVPFAEYMTAHGIIPGIKVDKGAQPLAGMPGELVTEGLDGL HHHCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCEECCCCCCCCCCCHHHHHHHHHHH RARLEEYYTLGARFAKWRAVITIGEDIPSGTCIEANSHALARYAALCQEQGLVPMVEPEV HHHHHHHHHHHHHHHHHEEEEEECCCCCCCCEEECCCHHHHHHHHHHHHCCCCCCCCCCE IMDGSHDIETCYEVTEATLRSLFGALYEQNVVLEGTILKASMVISGKSCEEQASIEEVAE EECCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEEEEEECCCCCHHHHHHHHHHH STVMCLKSTVPAILPGIVFLSGGQTDEQSTAHLNEMHQLGTLPWPLSFSYGRAMQQAALK HHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH LWAKDMTVNFAKAQQVIYERAKENGLAALGKWKG HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12024217 [H]