Definition Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome.
Accession NC_007705
Length 4,940,217

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The map label for this gene is ytfP [H]

Identifier: 84624591

GI number: 84624591

Start: 3317391

End: 3318653

Strand: Direct

Name: ytfP [H]

Synonym: XOO_2934

Alternate gene names: 84624591

Gene position: 3317391-3318653 (Clockwise)

Preceding gene: 84624590

Following gene: 84624593

Centisome position: 67.15

GC content: 65.32

Gene sequence:

>1263_bases
ATGACGGGTTCGAACAAGCGGCGGCTGGCCGTGATCGGTGGTGGGCCGGCCGGCTTGATGGCGGCAGAAGTGGCCTGTGC
TGCGGGCCTGGCAGTGGATCTGTACGAGGCCAAGGGCTCGGTGGGGCGCAAGTTTCTGATTGCCGGCAAAGGCGGTTTGA
ACCTCACCCATTCCGATCCGATGCCGCTGTTTGCGCAACGCTATCGCGAGCGTCAGCAGCCGGTCGCCGCATGGCTGCAG
GACTTCGACGCAGGGGCGCTGTGCGACTGGGCAAGCGTGCTGGGTGTTGACACTTACGTCGGCAGCTCCGGCCGTGTGTT
TCCGATGGACCGCAAGGCAGCGCCCTTGCTGCGCGGCTGGGTGCGTCGGCTCAAGGAACAGGGCGTCGTGTTTCATGTGC
AACACCGTTGGCGTGGCTGGAGCGAGGACGGCGCACTACGTTTCGATGCACCCACCGGCGCGATCGAGCGCAACGCAGAT
GCCGTCGTGTTGGCGCTGGGTGGCGGCAGCTGGCCGCAGCTCGGTTCCGATGGGCAGTGGCAAGCCGCATTGCAGCAACA
CGGCATTGCGGTTGCGCCCTTGGTACCGGCTAACTGCGGCTTCGATATCGACTGGAGCGCGCATTTCGTGCAGCGTCATG
CAGGTGCGCCGCTCAAGCCCGTCGTTGCACACTGGCAAGATCGCAATGGCGTACAGCACACATTGCAGGGTGAATGCGTG
GCCACAGCGGACGGCATCGAGGGCAGCCTGATCTATGCCATGGCTGCGGATCTGCGCGAGCAGATCGAGGCGCATGGCGT
TGCCGAACTCATGCTGGATCTGGTGCCAGGGCGCTCACGTGAGCGCGTGCACACCGAATTGGCCCAGCCACGCAAAGGAC
GCAGTTTCAGCGAGCATATGCGTCGCCAGGTCGGCATCGATGGCGTCAAGGCCGCCCTGCTCTACGAACATCTCGGCACG
CAGGCGGGCGACGATATTGCGTTGGCCGCACGCACGCTCAAGCAGTTGCCGCTGCGCTTGCTGCGGACGCGCCCGCTCGC
CGAAGCGATCAGTTCGGCAGGCGGCGTGCGGCTTGAAGCGCTGGACGATCAGCTGATGGCAATCGCGCAACCTGGCGTGT
TCTGCGCTGGCGAAATGCTCGATTGGGAAGCACCGACCGGCGGCTACCTGCTCACCGCCTGTTTCGCCAGCGGCCTGCGC
GCCGCACGTGGGGCGGTGCAGTGGCTCGATCAGCACGACAGGCGCGCTACAGACGATCGCTGA

Upstream 100 bases:

>100_bases
GTTACGGCGATAACGGCGCCGGTGGTGTGATTCCGCCCGGTGCCTCGTTGGTCTTCGATGTGGAATTGCTGGACGTGCAG
CCGCGCTGAGTGCCAGAACG

Downstream 100 bases:

>100_bases
CAGCCGCACGCGGCCACGCCGATTTGACGTCGTAGACCACCGCGCCCGGTTTGCCGAGCGCGGCAATGCGCGCGGCGTCG
TAGGCGCGATACTGCGCATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 420; Mature: 419

Protein sequence:

>420_residues
MTGSNKRRLAVIGGGPAGLMAAEVACAAGLAVDLYEAKGSVGRKFLIAGKGGLNLTHSDPMPLFAQRYRERQQPVAAWLQ
DFDAGALCDWASVLGVDTYVGSSGRVFPMDRKAAPLLRGWVRRLKEQGVVFHVQHRWRGWSEDGALRFDAPTGAIERNAD
AVVLALGGGSWPQLGSDGQWQAALQQHGIAVAPLVPANCGFDIDWSAHFVQRHAGAPLKPVVAHWQDRNGVQHTLQGECV
ATADGIEGSLIYAMAADLREQIEAHGVAELMLDLVPGRSRERVHTELAQPRKGRSFSEHMRRQVGIDGVKAALLYEHLGT
QAGDDIALAARTLKQLPLRLLRTRPLAEAISSAGGVRLEALDDQLMAIAQPGVFCAGEMLDWEAPTGGYLLTACFASGLR
AARGAVQWLDQHDRRATDDR

Sequences:

>Translated_420_residues
MTGSNKRRLAVIGGGPAGLMAAEVACAAGLAVDLYEAKGSVGRKFLIAGKGGLNLTHSDPMPLFAQRYRERQQPVAAWLQ
DFDAGALCDWASVLGVDTYVGSSGRVFPMDRKAAPLLRGWVRRLKEQGVVFHVQHRWRGWSEDGALRFDAPTGAIERNAD
AVVLALGGGSWPQLGSDGQWQAALQQHGIAVAPLVPANCGFDIDWSAHFVQRHAGAPLKPVVAHWQDRNGVQHTLQGECV
ATADGIEGSLIYAMAADLREQIEAHGVAELMLDLVPGRSRERVHTELAQPRKGRSFSEHMRRQVGIDGVKAALLYEHLGT
QAGDDIALAARTLKQLPLRLLRTRPLAEAISSAGGVRLEALDDQLMAIAQPGVFCAGEMLDWEAPTGGYLLTACFASGLR
AARGAVQWLDQHDRRATDDR
>Mature_419_residues
TGSNKRRLAVIGGGPAGLMAAEVACAAGLAVDLYEAKGSVGRKFLIAGKGGLNLTHSDPMPLFAQRYRERQQPVAAWLQD
FDAGALCDWASVLGVDTYVGSSGRVFPMDRKAAPLLRGWVRRLKEQGVVFHVQHRWRGWSEDGALRFDAPTGAIERNADA
VVLALGGGSWPQLGSDGQWQAALQQHGIAVAPLVPANCGFDIDWSAHFVQRHAGAPLKPVVAHWQDRNGVQHTLQGECVA
TADGIEGSLIYAMAADLREQIEAHGVAELMLDLVPGRSRERVHTELAQPRKGRSFSEHMRRQVGIDGVKAALLYEHLGTQ
AGDDIALAARTLKQLPLRLLRTRPLAEAISSAGGVRLEALDDQLMAIAQPGVFCAGEMLDWEAPTGGYLLTACFASGLRA
ARGAVQWLDQHDRRATDDR

Specific function: Unknown

COG id: COG2081

COG function: function code R; Predicted flavoproteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004792
- InterPro:   IPR013027 [H]

Pfam domain/function: PF03486 HI0933_like [H]

EC number: NA

Molecular weight: Translated: 45299; Mature: 45168

Theoretical pI: Translated: 7.39; Mature: 7.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGSNKRRLAVIGGGPAGLMAAEVACAAGLAVDLYEAKGSVGRKFLIAGKGGLNLTHSDP
CCCCCCCEEEEECCCCHHHHHHHHHHHHCCEEEEEHHCCCCCCEEEEECCCCCCCCCCCC
MPLFAQRYRERQQPVAAWLQDFDAGALCDWASVLGVDTYVGSSGRVFPMDRKAAPLLRGW
CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHEECCCCCEEECCCCCCHHHHHH
VRRLKEQGVVFHVQHRWRGWSEDGALRFDAPTGAIERNADAVVLALGGGSWPQLGSDGQW
HHHHHHCCCEEEEEHHCCCCCCCCCEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCHH
QAALQQHGIAVAPLVPANCGFDIDWSAHFVQRHAGAPLKPVVAHWQDRNGVQHTLQGECV
HHHHHHCCEEEECCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHCCCCCCCCHHCCCCEE
ATADGIEGSLIYAMAADLREQIEAHGVAELMLDLVPGRSRERVHTELAQPRKGRSFSEHM
EECCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHH
RRQVGIDGVKAALLYEHLGTQAGDDIALAARTLKQLPLRLLRTRPLAEAISSAGGVRLEA
HHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCEEEEH
LDDQLMAIAQPGVFCAGEMLDWEAPTGGYLLTACFASGLRAARGAVQWLDQHDRRATDDR
HHHHHHHHHCCCCEEECCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TGSNKRRLAVIGGGPAGLMAAEVACAAGLAVDLYEAKGSVGRKFLIAGKGGLNLTHSDP
CCCCCCEEEEECCCCHHHHHHHHHHHHCCEEEEEHHCCCCCCEEEEECCCCCCCCCCCC
MPLFAQRYRERQQPVAAWLQDFDAGALCDWASVLGVDTYVGSSGRVFPMDRKAAPLLRGW
CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHEECCCCCEEECCCCCCHHHHHH
VRRLKEQGVVFHVQHRWRGWSEDGALRFDAPTGAIERNADAVVLALGGGSWPQLGSDGQW
HHHHHHCCCEEEEEHHCCCCCCCCCEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCHH
QAALQQHGIAVAPLVPANCGFDIDWSAHFVQRHAGAPLKPVVAHWQDRNGVQHTLQGECV
HHHHHHCCEEEECCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHCCCCCCCCHHCCCCEE
ATADGIEGSLIYAMAADLREQIEAHGVAELMLDLVPGRSRERVHTELAQPRKGRSFSEHM
EECCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHH
RRQVGIDGVKAALLYEHLGTQAGDDIALAARTLKQLPLRLLRTRPLAEAISSAGGVRLEA
HHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCEEEEH
LDDQLMAIAQPGVFCAGEMLDWEAPTGGYLLTACFASGLRAARGAVQWLDQHDRRATDDR
HHHHHHHHHCCCCEEECCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]