| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is entD [H]
Identifier: 84624593
GI number: 84624593
Start: 3320299
End: 3321069
Strand: Direct
Name: entD [H]
Synonym: XOO_2936
Alternate gene names: 84624593
Gene position: 3320299-3321069 (Clockwise)
Preceding gene: 84624591
Following gene: 84624595
Centisome position: 67.21
GC content: 63.29
Gene sequence:
>771_bases GTGCTACTAGAGCGAATCGCGCCGGAACGCGCTGCCCACGGCGCGGTTCCTGGTCTGCAGGCGCATTGGCAATCGGCGCT CCCGTGTCCGGCAGGCGAACATCTGGTTGTTCAGGCGATGGACTTTGCCAGCGATCAGTTTTCACGTGATGCGTTCGCGC GGTGCGCAATGGCCTGCCCGCCTGGGATCGTTCGCAGCGTTCGCAAGCGCCAGGCCGAATACTTTTTCGGCAGACTCGCC GCGCGCCACGCGTTGCATCAGCAAGGCCTGGTCGTTCACCCTGACACGGTGCAGATCGCAACCGGCAACGCACGCGAGCC GATCTGGCCGAAAACCGCGGTGGGCAGCATTAGCCATACCCACCGGCTGGCCATGTCCGCCGTCGCGCCTGCCGATCGGT GGCGTGGCATCGGCATCGATCTGGAACACCTGGCAGACCCCGATGCCCAAGCGGCGCTGCGGGCTAGGGTGGTGAATGCC TCGGAACTGGCATTGCTGCAGACGTTGCACGATGCCGGCGACGCGACGCTGGATGCGTTGTTGACGCTGGTTTTTTCGGC GAAGGAAAGCCTGTTCAAAGCGAGTTTCGCGGTGGTCGGACGCTACTTCGACTTTTCGGCCGAGCAGGTCACAGGTGTGA ATGTTGCGGCCGGCTGTCTCCAGCTCAGGCTTTGCGAATCGCTCTGCCCGTCGCTTCCGGCGGATCATCTGTGCCCTGTC GGTTTCGGTTGGGTCGATCCACAAACAGTCGTCACCTACCGCGTCTGGTGA
Upstream 100 bases:
>100_bases CAGAGACAGCGGCAATGACGACAGCGAGATCGACCAAGCGCAGGGCGTTGCCCACACCGTCGGCGTTGGCCGACACCCAT CGTCACTGCCAGCAGTTGCC
Downstream 100 bases:
>100_bases CTGTGCCCACGTGGGAATACCGATCTCGCGGGCAAGCCCCGACGGTTGCCGTGCCCGGCGCCGCTGGCATGGCGCGGCCT ATCCATGCGATTACGCTGTT
Product: putative phosphopantetheinyl transferase
Products: pyrophosphate; AMP; enterobactin; aryl carrier protein/isochorismatase; 3',5'-ADP; serine activating enzyme + [C]
Alternate protein names: Enterobactin synthase component D; Enterochelin synthase D [H]
Number of amino acids: Translated: 256; Mature: 256
Protein sequence:
>256_residues MLLERIAPERAAHGAVPGLQAHWQSALPCPAGEHLVVQAMDFASDQFSRDAFARCAMACPPGIVRSVRKRQAEYFFGRLA ARHALHQQGLVVHPDTVQIATGNAREPIWPKTAVGSISHTHRLAMSAVAPADRWRGIGIDLEHLADPDAQAALRARVVNA SELALLQTLHDAGDATLDALLTLVFSAKESLFKASFAVVGRYFDFSAEQVTGVNVAAGCLQLRLCESLCPSLPADHLCPV GFGWVDPQTVVTYRVW
Sequences:
>Translated_256_residues MLLERIAPERAAHGAVPGLQAHWQSALPCPAGEHLVVQAMDFASDQFSRDAFARCAMACPPGIVRSVRKRQAEYFFGRLA ARHALHQQGLVVHPDTVQIATGNAREPIWPKTAVGSISHTHRLAMSAVAPADRWRGIGIDLEHLADPDAQAALRARVVNA SELALLQTLHDAGDATLDALLTLVFSAKESLFKASFAVVGRYFDFSAEQVTGVNVAAGCLQLRLCESLCPSLPADHLCPV GFGWVDPQTVVTYRVW >Mature_256_residues MLLERIAPERAAHGAVPGLQAHWQSALPCPAGEHLVVQAMDFASDQFSRDAFARCAMACPPGIVRSVRKRQAEYFFGRLA ARHALHQQGLVVHPDTVQIATGNAREPIWPKTAVGSISHTHRLAMSAVAPADRWRGIGIDLEHLADPDAQAALRARVVNA SELALLQTLHDAGDATLDALLTLVFSAKESLFKASFAVVGRYFDFSAEQVTGVNVAAGCLQLRLCESLCPSLPADHLCPV GFGWVDPQTVVTYRVW
Specific function: Catalyzes the transfer of the 4'-phosphopantetheine moiety from coenzyme A to apo-domains of both entB (an ArCP domain) and entF (a PCP domain). Plays an essential role in the assembly of the enterobactin [H]
COG id: COG2977
COG function: function code Q; Phosphopantetheinyl transferase component of siderophore synthetase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the P-Pant transferase superfamily. EntD family [H]
Homologues:
Organism=Escherichia coli, GI1786797, Length=128, Percent_Identity=38.28125, Blast_Score=69, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008278 - InterPro: IPR003542 [H]
Pfam domain/function: PF01648 ACPS [H]
EC number: 2.7.8.- [C]
Molecular weight: Translated: 27689; Mature: 27689
Theoretical pI: Translated: 7.08; Mature: 7.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLERIAPERAAHGAVPGLQAHWQSALPCPAGEHLVVQAMDFASDQFSRDAFARCAMACP CCHHHHCCHHHHCCCCCCHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCC PGIVRSVRKRQAEYFFGRLAARHALHQQGLVVHPDTVQIATGNAREPIWPKTAVGSISHT HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCEEEEECCCCCCCCCCCHHHCCHHHH HRLAMSAVAPADRWRGIGIDLEHLADPDAQAALRARVVNASELALLQTLHDAGDATLDAL HHHHHHHHCCHHHHCCCCCCHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHH LTLVFSAKESLFKASFAVVGRYFDFSAEQVTGVNVAAGCLQLRLCESLCPSLPADHLCPV HHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC GFGWVDPQTVVTYRVW CCCCCCCCEEEEEEEC >Mature Secondary Structure MLLERIAPERAAHGAVPGLQAHWQSALPCPAGEHLVVQAMDFASDQFSRDAFARCAMACP CCHHHHCCHHHHCCCCCCHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCC PGIVRSVRKRQAEYFFGRLAARHALHQQGLVVHPDTVQIATGNAREPIWPKTAVGSISHT HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCEEEEECCCCCCCCCCCHHHCCHHHH HRLAMSAVAPADRWRGIGIDLEHLADPDAQAALRARVVNASELALLQTLHDAGDATLDAL HHHHHHHHCCHHHHCCCCCCHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHH LTLVFSAKESLFKASFAVVGRYFDFSAEQVTGVNVAAGCLQLRLCESLCPSLPADHLCPV HHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC GFGWVDPQTVVTYRVW CCCCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 6 ATP; L-serine; 2,3-dihydroxybenzoate; Coenzyme A; apo-EntB; apo-serine activating enzyme [C]
Specific reaction: 6 ATP + 3 L-serine + 3 2,3-dihydroxybenzoate = 6 pyrophosphate + 6 AMP + enterobactin Coenzyme A + apo-EntB = aryl carrier protein/isochorismatase + 3',5'-ADP Coenzyme A + apo-serine activating enzyme = 3',5'-ADP + serine activating enzyme [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11677608; 12644504 [H]