Definition Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome.
Accession NC_007705
Length 4,940,217

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The map label for this gene is yacH [H]

Identifier: 84624581

GI number: 84624581

Start: 3305275

End: 3307098

Strand: Direct

Name: yacH [H]

Synonym: XOO_2924

Alternate gene names: 84624581

Gene position: 3305275-3307098 (Clockwise)

Preceding gene: 84624580

Following gene: 84624583

Centisome position: 66.91

GC content: 67.32

Gene sequence:

>1824_bases
ATGCAACGCACATGGTCACAAGGGCGCCTTGCCTTGGCGCTGTCGATCGCATCCACCGGCATGATTGCACTGGGCGGGTG
CCAACGCGCCGAGTCGCCGGCGCCGGCCGCCGCCGAGCCTCCACCTCCTCCCAGTGCGGTCGCAACGCCGGCTTACACGC
CGCCCACGGCGGATCAGCTGTACCAACTGGTTGCACCGATCGCCCTGTTTCCGGATAAGTTGCTGGCGCAGACACTGGCC
GCTTCGGTCTATCCCGATCAGGTGGTCACTGCGCAGGAGTGGCTGCGCAGCAACAGCGGCCTGAGCGCCGCCGATCGTGC
GCAGGCCACGGTGTCGCAATCCTGGGATCCGAGCATCAAGGCCCTGACCGCGTTTCCGGATGTCGTGTCCCAGTTGGCCG
GCAATCTCGATTGGACGCGTGCGCTCGGCGACGCCTATGCCCACGACCCCAACGATGTGCTCAATGCCGTGCAGATCATG
CGCCAACGCGCCCAGGCCAGCGGCCACCTGCGCAGCACGCCGCAACAGCAGGTGCAGGTCGCACGCCATGTGGTGGTGAC
GCCCATTCTGGATGAGGGACGCATCCCGCCGCCCTCGCAGATGATCACCATCGAACCGGCGGAGCGGGACGTGGTGTACG
TTCCGCACTACGACCCCGGCGTGGTCTACGGCACGCCGGTGGATGTCTATCGCGAGTATCGCTACCGCCCGGTCCGCTGG
TACGACGAAGGCGACGTCGTCACCACCGGCCTGGTGTCCTTCGGCGTCGGCGTGCTGGTGGGCGGCGCACTGGAACATCA
TCACGGCTGGTTCGGCTGGGCCGAGCCGGCGCCCGCCTGGCACAGCTGGGGCTGGAATAGCTGGGGCGTGAACTGGAACG
CGCCGCCGGCCGCCCCGCATTACGTGGTCTACCAGAACCATGTCTATGCGCCACGCACCACTATCATCAACAACCGCAAT
ACCTATATCGATTCGCGCTCGTATGTGAATCAGGATCAGCGCCATTGGTCCAACGCGACATCCGCGCCTGCGCCCGTTGC
CGGCATTGCCCCGATCGGCTTCCACGCAGCGCGGGCGGCCGCTCTACCGGCAGCGATGGCCAGCGCACAAGGGCTCAGGG
GGGGGGCAGGAGCCGGTGCGCCGGCGCCCTCGCCCGCCCAGCTGCATCGTCCGCCCGACTATGCGCATCTGGCAGCGCCG
CATTTCAATGCGCAGATGCTGCAGCCGGGCCGTCCGGTAGCGATGAACGCTTCGTCGCCGTCGCCGTTGTCGCATGCTGC
GCCGCTGACAACCGTGGCCCATGCGATGCAGCCACCGCCTGCAGGAATACATTCGCCGCACATGCAAGCGCCGGCATTCG
CATCGGTTACACCGCTCGAGCGAGTGAAGGATCTGCAGGCCGCACAGCAGCGCATGGCGCAACTGCACGCGGAGTCGCGG
GCAGCGCAGGAGAAGGCAGCTGCGGCCAACCGCGCACATGCGGCCATGCCGCCGCGCGATGCATTTGCCAGCCGCGACGC
CCGCAATAGCCCGTTCCGTTCGCAAGCCCAACCTGTGCGATGGAAGCCGCCGGTGCAAGAGCAGCGACAGCTGCCGCCCC
ATCAGCAATTTGCGTTCGCAGCCTCGCCGCGTGGCGAACATGCGCAGCCATCGCAGCCGCGCTACGAACCGCACCCGGTC
ATGAAGCCTGAGCCGCAGCAACACATGCAGCGAATGGCCTCCTTCACGCCGCCGCGCGCCGCGCCAACCCGTCCGGCGGA
CACGCACCAGCAGCGCCCGCATCCGGCAGCGCAGCCGCAATATCACGAACACCACCATAGCTGA

Upstream 100 bases:

>100_bases
GTGGCGCTCGGTCGACGGGAGAGCAGTTTTAGAAAGGTTCCAGACATTCAGACCGGCGCATGGTACGCGCGTCATCCACG
CGCACACAGCGAGGTGCCGC

Downstream 100 bases:

>100_bases
GCCAGCACGCTGACGCAGCCACGATGGCTGCGTCAGCGGCCAAGCTGGTCCAGCGCTTCGGCCAGTTCGGGCGCCAGCGG
CGCGCTCAGCACGTACGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 607; Mature: 607

Protein sequence:

>607_residues
MQRTWSQGRLALALSIASTGMIALGGCQRAESPAPAAAEPPPPPSAVATPAYTPPTADQLYQLVAPIALFPDKLLAQTLA
ASVYPDQVVTAQEWLRSNSGLSAADRAQATVSQSWDPSIKALTAFPDVVSQLAGNLDWTRALGDAYAHDPNDVLNAVQIM
RQRAQASGHLRSTPQQQVQVARHVVVTPILDEGRIPPPSQMITIEPAERDVVYVPHYDPGVVYGTPVDVYREYRYRPVRW
YDEGDVVTTGLVSFGVGVLVGGALEHHHGWFGWAEPAPAWHSWGWNSWGVNWNAPPAAPHYVVYQNHVYAPRTTIINNRN
TYIDSRSYVNQDQRHWSNATSAPAPVAGIAPIGFHAARAAALPAAMASAQGLRGGAGAGAPAPSPAQLHRPPDYAHLAAP
HFNAQMLQPGRPVAMNASSPSPLSHAAPLTTVAHAMQPPPAGIHSPHMQAPAFASVTPLERVKDLQAAQQRMAQLHAESR
AAQEKAAAANRAHAAMPPRDAFASRDARNSPFRSQAQPVRWKPPVQEQRQLPPHQQFAFAASPRGEHAQPSQPRYEPHPV
MKPEPQQHMQRMASFTPPRAAPTRPADTHQQRPHPAAQPQYHEHHHS

Sequences:

>Translated_607_residues
MQRTWSQGRLALALSIASTGMIALGGCQRAESPAPAAAEPPPPPSAVATPAYTPPTADQLYQLVAPIALFPDKLLAQTLA
ASVYPDQVVTAQEWLRSNSGLSAADRAQATVSQSWDPSIKALTAFPDVVSQLAGNLDWTRALGDAYAHDPNDVLNAVQIM
RQRAQASGHLRSTPQQQVQVARHVVVTPILDEGRIPPPSQMITIEPAERDVVYVPHYDPGVVYGTPVDVYREYRYRPVRW
YDEGDVVTTGLVSFGVGVLVGGALEHHHGWFGWAEPAPAWHSWGWNSWGVNWNAPPAAPHYVVYQNHVYAPRTTIINNRN
TYIDSRSYVNQDQRHWSNATSAPAPVAGIAPIGFHAARAAALPAAMASAQGLRGGAGAGAPAPSPAQLHRPPDYAHLAAP
HFNAQMLQPGRPVAMNASSPSPLSHAAPLTTVAHAMQPPPAGIHSPHMQAPAFASVTPLERVKDLQAAQQRMAQLHAESR
AAQEKAAAANRAHAAMPPRDAFASRDARNSPFRSQAQPVRWKPPVQEQRQLPPHQQFAFAASPRGEHAQPSQPRYEPHPV
MKPEPQQHMQRMASFTPPRAAPTRPADTHQQRPHPAAQPQYHEHHHS
>Mature_607_residues
MQRTWSQGRLALALSIASTGMIALGGCQRAESPAPAAAEPPPPPSAVATPAYTPPTADQLYQLVAPIALFPDKLLAQTLA
ASVYPDQVVTAQEWLRSNSGLSAADRAQATVSQSWDPSIKALTAFPDVVSQLAGNLDWTRALGDAYAHDPNDVLNAVQIM
RQRAQASGHLRSTPQQQVQVARHVVVTPILDEGRIPPPSQMITIEPAERDVVYVPHYDPGVVYGTPVDVYREYRYRPVRW
YDEGDVVTTGLVSFGVGVLVGGALEHHHGWFGWAEPAPAWHSWGWNSWGVNWNAPPAAPHYVVYQNHVYAPRTTIINNRN
TYIDSRSYVNQDQRHWSNATSAPAPVAGIAPIGFHAARAAALPAAMASAQGLRGGAGAGAPAPSPAQLHRPPDYAHLAAP
HFNAQMLQPGRPVAMNASSPSPLSHAAPLTTVAHAMQPPPAGIHSPHMQAPAFASVTPLERVKDLQAAQQRMAQLHAESR
AAQEKAAAANRAHAAMPPRDAFASRDARNSPFRSQAQPVRWKPPVQEQRQLPPHQQFAFAASPRGEHAQPSQPRYEPHPV
MKPEPQQHMQRMASFTPPRAAPTRPADTHQQRPHPAAQPQYHEHHHS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786308, Length=207, Percent_Identity=39.1304347826087, Blast_Score=134, Evalue=1e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021728 [H]

Pfam domain/function: PF11737 DUF3300 [H]

EC number: NA

Molecular weight: Translated: 65811; Mature: 65811

Theoretical pI: Translated: 9.38; Mature: 9.38

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRTWSQGRLALALSIASTGMIALGGCQRAESPAPAAAEPPPPPSAVATPAYTPPTADQL
CCCCCCCCCEEEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
YQLVAPIALFPDKLLAQTLAASVYPDQVVTAQEWLRSNSGLSAADRAQATVSQSWDPSIK
HHHHHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHH
ALTAFPDVVSQLAGNLDWTRALGDAYAHDPNDVLNAVQIMRQRAQASGHLRSTPQQQVQV
HHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
ARHVVVTPILDEGRIPPPSQMITIEPAERDVVYVPHYDPGVVYGTPVDVYREYRYRPVRW
HHHHEEEEECCCCCCCCCCCEEEECCCCCCEEECCCCCCCCEECCCHHHHHHHCCCCEEE
YDEGDVVTTGLVSFGVGVLVGGALEHHHGWFGWAEPAPAWHSWGWNSWGVNWNAPPAAPH
ECCCCEEHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCE
YVVYQNHVYAPRTTIINNRNTYIDSRSYVNQDQRHWSNATSAPAPVAGIAPIGFHAARAA
EEEEECCCCCCCEEEECCCCCEECCHHHHCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHH
ALPAAMASAQGLRGGAGAGAPAPSPAQLHRPPDYAHLAAPHFNAQMLQPGRPVAMNASSP
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCHHCCCCCCEEECCCCC
SPLSHAAPLTTVAHAMQPPPAGIHSPHMQAPAFASVTPLERVKDLQAAQQRMAQLHAESR
CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
AAQEKAAAANRAHAAMPPRDAFASRDARNSPFRSQAQPVRWKPPVQEQRQLPPHQQFAFA
HHHHHHHHHHCHHCCCCCHHHHHCCCCCCCCCHHCCCCCCCCCCHHHHHCCCCHHHEEEE
ASPRGEHAQPSQPRYEPHPVMKPEPQQHMQRMASFTPPRAAPTRPADTHQQRPHPAAQPQ
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
YHEHHHS
HHHCCCC
>Mature Secondary Structure
MQRTWSQGRLALALSIASTGMIALGGCQRAESPAPAAAEPPPPPSAVATPAYTPPTADQL
CCCCCCCCCEEEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
YQLVAPIALFPDKLLAQTLAASVYPDQVVTAQEWLRSNSGLSAADRAQATVSQSWDPSIK
HHHHHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHH
ALTAFPDVVSQLAGNLDWTRALGDAYAHDPNDVLNAVQIMRQRAQASGHLRSTPQQQVQV
HHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
ARHVVVTPILDEGRIPPPSQMITIEPAERDVVYVPHYDPGVVYGTPVDVYREYRYRPVRW
HHHHEEEEECCCCCCCCCCCEEEECCCCCCEEECCCCCCCCEECCCHHHHHHHCCCCEEE
YDEGDVVTTGLVSFGVGVLVGGALEHHHGWFGWAEPAPAWHSWGWNSWGVNWNAPPAAPH
ECCCCEEHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCE
YVVYQNHVYAPRTTIINNRNTYIDSRSYVNQDQRHWSNATSAPAPVAGIAPIGFHAARAA
EEEEECCCCCCCEEEECCCCCEECCHHHHCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHH
ALPAAMASAQGLRGGAGAGAPAPSPAQLHRPPDYAHLAAPHFNAQMLQPGRPVAMNASSP
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCHHCCCCCCEEECCCCC
SPLSHAAPLTTVAHAMQPPPAGIHSPHMQAPAFASVTPLERVKDLQAAQQRMAQLHAESR
CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
AAQEKAAAANRAHAAMPPRDAFASRDARNSPFRSQAQPVRWKPPVQEQRQLPPHQQFAFA
HHHHHHHHHHCHHCCCCCHHHHHCCCCCCCCCHHCCCCCCCCCCHHHHHCCCCHHHEEEE
ASPRGEHAQPSQPRYEPHPVMKPEPQQHMQRMASFTPPRAAPTRPADTHQQRPHPAAQPQ
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
YHEHHHS
HHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8202364; 9278503 [H]