| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is zupT [H]
Identifier: 84624580
GI number: 84624580
Start: 3304699
End: 3304959
Strand: Direct
Name: zupT [H]
Synonym: XOO_2923
Alternate gene names: 84624580
Gene position: 3304699-3304959 (Clockwise)
Preceding gene: 84624579
Following gene: 84624581
Centisome position: 66.89
GC content: 65.9
Gene sequence:
>261_bases GTGGGCGCCAGCCTGCTCAGCGGATTGGCCGAACCGATCGGTGCGGGCATCGGCTATCTGGCGTTGTCCGGCGTGCTCTC GGATGCGGTCTTCGGCACCGTGTTCGGGCTGATTGCCGGGGTCATGGTGTTTCTGGCGCTGGACGCGTTGCTGCCGGCCG CCAAGCGCTACGCACAGGGTCACGAGACCGTGTATGGCCTGGTCTCGGGGATGGGGACGCTGGCGATCAGTCTGGTGTTG TTCCGCTTCGCAACGCCTTGA
Upstream 100 bases:
>100_bases TGGGGATGCCGCTGGCGTTCGCCATCGCCATCCACAACATTCCCGAAGGCATTGCGATCGCGGTGCCGGTGTAGTTCGCT ACCGCAACACGTTCTACGCA
Downstream 100 bases:
>100_bases AGCGCGCCTTGTTGGAGCACGCCGTGCGCTGGCATCGCTCATTGTTATGCACTGGCAGCGAAGCGCACCACGGTAACCGC CGACACTGCCGCTCCAGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 86; Mature: 85
Protein sequence:
>86_residues MGASLLSGLAEPIGAGIGYLALSGVLSDAVFGTVFGLIAGVMVFLALDALLPAAKRYAQGHETVYGLVSGMGTLAISLVL FRFATP
Sequences:
>Translated_86_residues MGASLLSGLAEPIGAGIGYLALSGVLSDAVFGTVFGLIAGVMVFLALDALLPAAKRYAQGHETVYGLVSGMGTLAISLVL FRFATP >Mature_85_residues GASLLSGLAEPIGAGIGYLALSGVLSDAVFGTVFGLIAGVMVFLALDALLPAAKRYAQGHETVYGLVSGMGTLAISLVLF RFATP
Specific function: Mediates zinc uptake. May also transport other divalent cations [H]
COG id: COG0428
COG function: function code P; Predicted divalent heavy-metal cations transporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ZIP transporter (TC 2.A.5) family. ZupT subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003689 [H]
Pfam domain/function: PF02535 Zip [H]
EC number: NA
Molecular weight: Translated: 8658; Mature: 8527
Theoretical pI: Translated: 5.60; Mature: 5.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGASLLSGLAEPIGAGIGYLALSGVLSDAVFGTVFGLIAGVMVFLALDALLPAAKRYAQG CCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HETVYGLVSGMGTLAISLVLFRFATP HHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure GASLLSGLAEPIGAGIGYLALSGVLSDAVFGTVFGLIAGVMVFLALDALLPAAKRYAQG CHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HETVYGLVSGMGTLAISLVLFRFATP HHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12024217 [H]