Definition Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome.
Accession NC_007705
Length 4,940,217

Click here to switch to the map view.

The map label for this gene is suhB [H]

Identifier: 84624213

GI number: 84624213

Start: 2849150

End: 2849983

Strand: Direct

Name: suhB [H]

Synonym: XOO_2556

Alternate gene names: 84624213

Gene position: 2849150-2849983 (Clockwise)

Preceding gene: 84624209

Following gene: 84624215

Centisome position: 57.67

GC content: 64.15

Gene sequence:

>834_bases
ATGCAGAAACCCGCCGTCACCGTCATGGTCAAAGCCGCCCGCCTCGCCGGCAATGTGCTGTTGCGCGGTATCAACAAGCT
CGATGCGCTCAACGTGGTGCAGAAAGGCCGCATGGACTATGCCAGCGAAGTCGATGCCGACGCCGAGAAGGTCATCATCA
AGGAACTCAAGCGCGGCTATCCCGAATACGCCGTATTTGGCGAAGAAGGCGGCGTGCAGGGCGGCAAGAGTGGCCGCTAC
ACCTGGGTGATCGATCCGCTGGACGGCACCAGCAACTATCTGCGCGGCTTTCCGCACTACTGCGTTTCCATCGCACTGGT
GGAAAACGGCGAACCTATCGATGCGGTGATTTTCGATCCGCTGCGCAATGAGCTGTTCACTGCCAGCCGTGGTGTCGGCG
CGGTGCTCAACGACCGCCGCATCCGCATTGCCGAGCGCAAGGACCTGGAAGGCGCGATGGTCCACACCGGCTTCCCGCCG
CGCGAACGTGCGCGCGCCAGTGCGCAGCTCAAGTGCGTGGATGCGCTGCTGGTGCAGGCCGAAGACGTGCGTCGCACCGG
CTCGGCGGCGCTGGACCTGGCCTATGTGGCCTGCGGGCGCGCCGACGCCTATTTCGAAGCAGGCGTCAAAGCCTGGGACA
TCGCTGCCGGCGTTTTGCTGGTGCGCGAGGCCGGTGGCCGCGTTTGCGACTACAAGGGCGCCACTCCGCCGCGCATGGAC
AACATGGGCCCGCAGACGCAGCAGATCGTGGCCGGCAACATCAAGATCAGCGACGCGCTGCAGAAGGTCATCGTCAATAC
CGGCTATGCGCGCGAGTTCGACGCCACGTTCTGA

Upstream 100 bases:

>100_bases
TGTTTGGCCGTAGATGGTAAACTGCGCGGCCGGCTTTCGCGCCGGAGCGCTCTTTATAACTTCGCCATTGTCCGATTCTG
CCTTCACGGGAGCTTTAACC

Downstream 100 bases:

>100_bases
GTGCCGCGCCTGACGGCGGAATGCGCGACGCATGTCGCTGCAGCAGGACCACACAGACAAAGGGCCGGGATCAAACCCGG
CCTTTTGCGTTGCATAACGC

Product: extragenic supressor protein SuhB

Products: NA

Alternate protein names: I-1-Pase; IMPase; Inositol-1-phosphatase [H]

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MQKPAVTVMVKAARLAGNVLLRGINKLDALNVVQKGRMDYASEVDADAEKVIIKELKRGYPEYAVFGEEGGVQGGKSGRY
TWVIDPLDGTSNYLRGFPHYCVSIALVENGEPIDAVIFDPLRNELFTASRGVGAVLNDRRIRIAERKDLEGAMVHTGFPP
RERARASAQLKCVDALLVQAEDVRRTGSAALDLAYVACGRADAYFEAGVKAWDIAAGVLLVREAGGRVCDYKGATPPRMD
NMGPQTQQIVAGNIKISDALQKVIVNTGYAREFDATF

Sequences:

>Translated_277_residues
MQKPAVTVMVKAARLAGNVLLRGINKLDALNVVQKGRMDYASEVDADAEKVIIKELKRGYPEYAVFGEEGGVQGGKSGRY
TWVIDPLDGTSNYLRGFPHYCVSIALVENGEPIDAVIFDPLRNELFTASRGVGAVLNDRRIRIAERKDLEGAMVHTGFPP
RERARASAQLKCVDALLVQAEDVRRTGSAALDLAYVACGRADAYFEAGVKAWDIAAGVLLVREAGGRVCDYKGATPPRMD
NMGPQTQQIVAGNIKISDALQKVIVNTGYAREFDATF
>Mature_277_residues
MQKPAVTVMVKAARLAGNVLLRGINKLDALNVVQKGRMDYASEVDADAEKVIIKELKRGYPEYAVFGEEGGVQGGKSGRY
TWVIDPLDGTSNYLRGFPHYCVSIALVENGEPIDAVIFDPLRNELFTASRGVGAVLNDRRIRIAERKDLEGAMVHTGFPP
RERARASAQLKCVDALLVQAEDVRRTGSAALDLAYVACGRADAYFEAGVKAWDIAAGVLLVREAGGRVCDYKGATPPRMD
NMGPQTQQIVAGNIKISDALQKVIVNTGYAREFDATF

Specific function: Unknown

COG id: COG0483

COG function: function code G; Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the inositol monophosphatase family [H]

Homologues:

Organism=Homo sapiens, GI7657236, Length=229, Percent_Identity=34.9344978165939, Blast_Score=132, Evalue=2e-31,
Organism=Homo sapiens, GI5031789, Length=253, Percent_Identity=30.8300395256917, Blast_Score=131, Evalue=6e-31,
Organism=Homo sapiens, GI221625487, Length=253, Percent_Identity=30.8300395256917, Blast_Score=131, Evalue=8e-31,
Organism=Homo sapiens, GI221625507, Length=142, Percent_Identity=32.3943661971831, Blast_Score=87, Evalue=1e-17,
Organism=Escherichia coli, GI1788882, Length=258, Percent_Identity=45.3488372093023, Blast_Score=229, Evalue=2e-61,
Organism=Escherichia coli, GI1790659, Length=231, Percent_Identity=28.1385281385281, Blast_Score=72, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI193202570, Length=235, Percent_Identity=28.0851063829787, Blast_Score=104, Evalue=5e-23,
Organism=Caenorhabditis elegans, GI193202572, Length=231, Percent_Identity=27.2727272727273, Blast_Score=102, Evalue=3e-22,
Organism=Saccharomyces cerevisiae, GI6320493, Length=203, Percent_Identity=35.4679802955665, Blast_Score=134, Evalue=2e-32,
Organism=Saccharomyces cerevisiae, GI6321836, Length=212, Percent_Identity=32.0754716981132, Blast_Score=121, Evalue=2e-28,
Organism=Drosophila melanogaster, GI21357329, Length=207, Percent_Identity=38.1642512077295, Blast_Score=150, Evalue=6e-37,
Organism=Drosophila melanogaster, GI24664926, Length=243, Percent_Identity=34.156378600823, Blast_Score=138, Evalue=5e-33,
Organism=Drosophila melanogaster, GI24664922, Length=271, Percent_Identity=30.6273062730627, Blast_Score=132, Evalue=4e-31,
Organism=Drosophila melanogaster, GI21357303, Length=216, Percent_Identity=34.2592592592593, Blast_Score=128, Evalue=4e-30,
Organism=Drosophila melanogaster, GI21357957, Length=256, Percent_Identity=30.859375, Blast_Score=113, Evalue=1e-25,
Organism=Drosophila melanogaster, GI24664918, Length=265, Percent_Identity=29.4339622641509, Blast_Score=99, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020583
- InterPro:   IPR000760
- InterPro:   IPR020550
- InterPro:   IPR022337 [H]

Pfam domain/function: PF00459 Inositol_P [H]

EC number: =3.1.3.25 [H]

Molecular weight: Translated: 30063; Mature: 30063

Theoretical pI: Translated: 7.91; Mature: 7.91

Prosite motif: PS00629 IMP_1 ; PS00630 IMP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKPAVTVMVKAARLAGNVLLRGINKLDALNVVQKGRMDYASEVDADAEKVIIKELKRGY
CCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHCCC
PEYAVFGEEGGVQGGKSGRYTWVIDPLDGTSNYLRGFPHYCVSIALVENGEPIDAVIFDP
CCEEEECCCCCCCCCCCCCEEEEEECCCCCHHHHHCCCCCEEEEEEECCCCCCEEEEECH
LRNELFTASRGVGAVLNDRRIRIAERKDLEGAMVHTGFPPRERARASAQLKCVDALLVQA
HHHHHHHHCCCCCEEECCCEEEEECCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHH
EDVRRTGSAALDLAYVACGRADAYFEAGVKAWDIAAGVLLVREAGGRVCDYKGATPPRMD
HHHHHCCCHHHHHHHHHCCCCHHHHHCCCCHHHHHHHEEEEECCCCCEEECCCCCCCCCC
NMGPQTQQIVAGNIKISDALQKVIVNTGYAREFDATF
CCCCCCHHEEECCEEHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MQKPAVTVMVKAARLAGNVLLRGINKLDALNVVQKGRMDYASEVDADAEKVIIKELKRGY
CCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHCCC
PEYAVFGEEGGVQGGKSGRYTWVIDPLDGTSNYLRGFPHYCVSIALVENGEPIDAVIFDP
CCEEEECCCCCCCCCCCCCEEEEEECCCCCHHHHHCCCCCEEEEEEECCCCCCEEEEECH
LRNELFTASRGVGAVLNDRRIRIAERKDLEGAMVHTGFPPRERARASAQLKCVDALLVQA
HHHHHHHHCCCCCEEECCCEEEEECCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHH
EDVRRTGSAALDLAYVACGRADAYFEAGVKAWDIAAGVLLVREAGGRVCDYKGATPPRMD
HHHHHCCCHHHHHHHHHCCCCHHHHHCCCCHHHHHHHEEEEECCCCCEEECCCCCCCCCC
NMGPQTQQIVAGNIKISDALQKVIVNTGYAREFDATF
CCCCCCHHEEECCEEHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10910347 [H]