| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is suhB [H]
Identifier: 84624213
GI number: 84624213
Start: 2849150
End: 2849983
Strand: Direct
Name: suhB [H]
Synonym: XOO_2556
Alternate gene names: 84624213
Gene position: 2849150-2849983 (Clockwise)
Preceding gene: 84624209
Following gene: 84624215
Centisome position: 57.67
GC content: 64.15
Gene sequence:
>834_bases ATGCAGAAACCCGCCGTCACCGTCATGGTCAAAGCCGCCCGCCTCGCCGGCAATGTGCTGTTGCGCGGTATCAACAAGCT CGATGCGCTCAACGTGGTGCAGAAAGGCCGCATGGACTATGCCAGCGAAGTCGATGCCGACGCCGAGAAGGTCATCATCA AGGAACTCAAGCGCGGCTATCCCGAATACGCCGTATTTGGCGAAGAAGGCGGCGTGCAGGGCGGCAAGAGTGGCCGCTAC ACCTGGGTGATCGATCCGCTGGACGGCACCAGCAACTATCTGCGCGGCTTTCCGCACTACTGCGTTTCCATCGCACTGGT GGAAAACGGCGAACCTATCGATGCGGTGATTTTCGATCCGCTGCGCAATGAGCTGTTCACTGCCAGCCGTGGTGTCGGCG CGGTGCTCAACGACCGCCGCATCCGCATTGCCGAGCGCAAGGACCTGGAAGGCGCGATGGTCCACACCGGCTTCCCGCCG CGCGAACGTGCGCGCGCCAGTGCGCAGCTCAAGTGCGTGGATGCGCTGCTGGTGCAGGCCGAAGACGTGCGTCGCACCGG CTCGGCGGCGCTGGACCTGGCCTATGTGGCCTGCGGGCGCGCCGACGCCTATTTCGAAGCAGGCGTCAAAGCCTGGGACA TCGCTGCCGGCGTTTTGCTGGTGCGCGAGGCCGGTGGCCGCGTTTGCGACTACAAGGGCGCCACTCCGCCGCGCATGGAC AACATGGGCCCGCAGACGCAGCAGATCGTGGCCGGCAACATCAAGATCAGCGACGCGCTGCAGAAGGTCATCGTCAATAC CGGCTATGCGCGCGAGTTCGACGCCACGTTCTGA
Upstream 100 bases:
>100_bases TGTTTGGCCGTAGATGGTAAACTGCGCGGCCGGCTTTCGCGCCGGAGCGCTCTTTATAACTTCGCCATTGTCCGATTCTG CCTTCACGGGAGCTTTAACC
Downstream 100 bases:
>100_bases GTGCCGCGCCTGACGGCGGAATGCGCGACGCATGTCGCTGCAGCAGGACCACACAGACAAAGGGCCGGGATCAAACCCGG CCTTTTGCGTTGCATAACGC
Product: extragenic supressor protein SuhB
Products: NA
Alternate protein names: I-1-Pase; IMPase; Inositol-1-phosphatase [H]
Number of amino acids: Translated: 277; Mature: 277
Protein sequence:
>277_residues MQKPAVTVMVKAARLAGNVLLRGINKLDALNVVQKGRMDYASEVDADAEKVIIKELKRGYPEYAVFGEEGGVQGGKSGRY TWVIDPLDGTSNYLRGFPHYCVSIALVENGEPIDAVIFDPLRNELFTASRGVGAVLNDRRIRIAERKDLEGAMVHTGFPP RERARASAQLKCVDALLVQAEDVRRTGSAALDLAYVACGRADAYFEAGVKAWDIAAGVLLVREAGGRVCDYKGATPPRMD NMGPQTQQIVAGNIKISDALQKVIVNTGYAREFDATF
Sequences:
>Translated_277_residues MQKPAVTVMVKAARLAGNVLLRGINKLDALNVVQKGRMDYASEVDADAEKVIIKELKRGYPEYAVFGEEGGVQGGKSGRY TWVIDPLDGTSNYLRGFPHYCVSIALVENGEPIDAVIFDPLRNELFTASRGVGAVLNDRRIRIAERKDLEGAMVHTGFPP RERARASAQLKCVDALLVQAEDVRRTGSAALDLAYVACGRADAYFEAGVKAWDIAAGVLLVREAGGRVCDYKGATPPRMD NMGPQTQQIVAGNIKISDALQKVIVNTGYAREFDATF >Mature_277_residues MQKPAVTVMVKAARLAGNVLLRGINKLDALNVVQKGRMDYASEVDADAEKVIIKELKRGYPEYAVFGEEGGVQGGKSGRY TWVIDPLDGTSNYLRGFPHYCVSIALVENGEPIDAVIFDPLRNELFTASRGVGAVLNDRRIRIAERKDLEGAMVHTGFPP RERARASAQLKCVDALLVQAEDVRRTGSAALDLAYVACGRADAYFEAGVKAWDIAAGVLLVREAGGRVCDYKGATPPRMD NMGPQTQQIVAGNIKISDALQKVIVNTGYAREFDATF
Specific function: Unknown
COG id: COG0483
COG function: function code G; Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the inositol monophosphatase family [H]
Homologues:
Organism=Homo sapiens, GI7657236, Length=229, Percent_Identity=34.9344978165939, Blast_Score=132, Evalue=2e-31, Organism=Homo sapiens, GI5031789, Length=253, Percent_Identity=30.8300395256917, Blast_Score=131, Evalue=6e-31, Organism=Homo sapiens, GI221625487, Length=253, Percent_Identity=30.8300395256917, Blast_Score=131, Evalue=8e-31, Organism=Homo sapiens, GI221625507, Length=142, Percent_Identity=32.3943661971831, Blast_Score=87, Evalue=1e-17, Organism=Escherichia coli, GI1788882, Length=258, Percent_Identity=45.3488372093023, Blast_Score=229, Evalue=2e-61, Organism=Escherichia coli, GI1790659, Length=231, Percent_Identity=28.1385281385281, Blast_Score=72, Evalue=4e-14, Organism=Caenorhabditis elegans, GI193202570, Length=235, Percent_Identity=28.0851063829787, Blast_Score=104, Evalue=5e-23, Organism=Caenorhabditis elegans, GI193202572, Length=231, Percent_Identity=27.2727272727273, Blast_Score=102, Evalue=3e-22, Organism=Saccharomyces cerevisiae, GI6320493, Length=203, Percent_Identity=35.4679802955665, Blast_Score=134, Evalue=2e-32, Organism=Saccharomyces cerevisiae, GI6321836, Length=212, Percent_Identity=32.0754716981132, Blast_Score=121, Evalue=2e-28, Organism=Drosophila melanogaster, GI21357329, Length=207, Percent_Identity=38.1642512077295, Blast_Score=150, Evalue=6e-37, Organism=Drosophila melanogaster, GI24664926, Length=243, Percent_Identity=34.156378600823, Blast_Score=138, Evalue=5e-33, Organism=Drosophila melanogaster, GI24664922, Length=271, Percent_Identity=30.6273062730627, Blast_Score=132, Evalue=4e-31, Organism=Drosophila melanogaster, GI21357303, Length=216, Percent_Identity=34.2592592592593, Blast_Score=128, Evalue=4e-30, Organism=Drosophila melanogaster, GI21357957, Length=256, Percent_Identity=30.859375, Blast_Score=113, Evalue=1e-25, Organism=Drosophila melanogaster, GI24664918, Length=265, Percent_Identity=29.4339622641509, Blast_Score=99, Evalue=2e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020583 - InterPro: IPR000760 - InterPro: IPR020550 - InterPro: IPR022337 [H]
Pfam domain/function: PF00459 Inositol_P [H]
EC number: =3.1.3.25 [H]
Molecular weight: Translated: 30063; Mature: 30063
Theoretical pI: Translated: 7.91; Mature: 7.91
Prosite motif: PS00629 IMP_1 ; PS00630 IMP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKPAVTVMVKAARLAGNVLLRGINKLDALNVVQKGRMDYASEVDADAEKVIIKELKRGY CCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHCCC PEYAVFGEEGGVQGGKSGRYTWVIDPLDGTSNYLRGFPHYCVSIALVENGEPIDAVIFDP CCEEEECCCCCCCCCCCCCEEEEEECCCCCHHHHHCCCCCEEEEEEECCCCCCEEEEECH LRNELFTASRGVGAVLNDRRIRIAERKDLEGAMVHTGFPPRERARASAQLKCVDALLVQA HHHHHHHHCCCCCEEECCCEEEEECCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHH EDVRRTGSAALDLAYVACGRADAYFEAGVKAWDIAAGVLLVREAGGRVCDYKGATPPRMD HHHHHCCCHHHHHHHHHCCCCHHHHHCCCCHHHHHHHEEEEECCCCCEEECCCCCCCCCC NMGPQTQQIVAGNIKISDALQKVIVNTGYAREFDATF CCCCCCHHEEECCEEHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MQKPAVTVMVKAARLAGNVLLRGINKLDALNVVQKGRMDYASEVDADAEKVIIKELKRGY CCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHCCC PEYAVFGEEGGVQGGKSGRYTWVIDPLDGTSNYLRGFPHYCVSIALVENGEPIDAVIFDP CCEEEECCCCCCCCCCCCCEEEEEECCCCCHHHHHCCCCCEEEEEEECCCCCCEEEEECH LRNELFTASRGVGAVLNDRRIRIAERKDLEGAMVHTGFPPRERARASAQLKCVDALLVQA HHHHHHHHCCCCCEEECCCEEEEECCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHH EDVRRTGSAALDLAYVACGRADAYFEAGVKAWDIAAGVLLVREAGGRVCDYKGATPPRMD HHHHHCCCHHHHHHHHHCCCCHHHHHCCCCHHHHHHHEEEEECCCCCEEECCCCCCCCCC NMGPQTQQIVAGNIKISDALQKVIVNTGYAREFDATF CCCCCCHHEEECCEEHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10910347 [H]