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The map label for this gene is yjeK [H]

Identifier: 84624209

GI number: 84624209

Start: 2843925

End: 2844953

Strand: Direct

Name: yjeK [H]

Synonym: XOO_2552

Alternate gene names: 84624209

Gene position: 2843925-2844953 (Clockwise)

Preceding gene: 84624202

Following gene: 84624213

Centisome position: 57.57

GC content: 70.36

Gene sequence:

>1029_bases
ATGATAACCGCAGCCCCCCGCGCCTTACAGCCATCCCCGCCCCCTGCCCTGCAGCCATCGCGCTGGCAGCAGCAATGGCG
CGACGCCGTGCGCGACCCACGCGTGCTGCTGGAGCTGTTGGGCCTGGATGCGCAGGCGGCGGCGATCAGCGACGCTGCCG
CTGCGCAGTTTCCGCTGCGGGTGCCGCGCGCGTTTGTGGCGCGGATGCGCCACGGCGACCTCCACGACCCGCTGCTGCGC
CAGGTGCTGCCGCTGGATGCGGAAATGCAGCCCGTGCCGGGCTTCGGCCTGGACGCGGTGGGCGATGCCGCCGCCAAGAC
TGCCGCCGGTGTGATCCAGAAGTACCGCGGCCGCGCCCTGCTGATCGCCACCGGCAGCTGCGCCGTGCATTGCCGCTACT
GCTTCCGCCGCCACTTCCCGTATGCCGAAGAGACCGCTGCGCGCGATGGCTGGCGTGAGGCGGTGGCCGCGATCGCCGCC
GACCCCGGCATCGACGAAGTGCTGCTCTCCGGCGGCGACCCGCTCTCGCTGGCCACGCCCAAGCTGGCCGAACTTACCGA
CGCGCTGGCAGCGATCCCGCACCTCAAACGCCTGCGCATCCACAGCCGCCTGCCGATCGTATTGCCCGAGCGCGTGGACG
CACCACTGCTGGCCTGGCTGCGCAGCCTGCCGTGGCCAGCGGCGTTCGTGCTGCATGCCAACCACGCCAATGAATTCGAC
TCCGCAGTGGACATGGCCATGCACGCGCTGCGCGACACCGGCGCGCAACTCCTCAACCAGGCTGTGCTGCTGGGCGGGGT
CAACGACAGCGTGGACGCGCTGGCGGCATTGAGCGAGCGCAGCTTCGCTGCCGGCGTACTGCCCTATTACCTGCATCAGC
TCGACCGCGTCGCCGGCGTGGCGCATTTCGAAGTGGACGATGCCCGCGCACGCGCGCTGCATACCGAACTGGCCACGCGC
CTGTCCGGCTATCTGGTGCCGCGCCTGGTGCGCGAAATTCCCGGCGATACCGGCAAACGGCCGCTGTAA

Upstream 100 bases:

>100_bases
GTGCAGCTCCTCGATAAGACCACGACCCGCCATGCGGTGGCAGGTCGGATTAGAATGGGGCGCCCGCCGCAACCGGCGGG
CATTGGTTTTGTGACCACAC

Downstream 100 bases:

>100_bases
CCGCCCTGACCTCAGCGTAATCCGTCGCAGGAGCGCGCCCGGGCGCGATGAAGCTTTACCGGTAACGCCCAATCGCGCCC
AGGAGCGCTCCTACGCTGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MITAAPRALQPSPPPALQPSRWQQQWRDAVRDPRVLLELLGLDAQAAAISDAAAAQFPLRVPRAFVARMRHGDLHDPLLR
QVLPLDAEMQPVPGFGLDAVGDAAAKTAAGVIQKYRGRALLIATGSCAVHCRYCFRRHFPYAEETAARDGWREAVAAIAA
DPGIDEVLLSGGDPLSLATPKLAELTDALAAIPHLKRLRIHSRLPIVLPERVDAPLLAWLRSLPWPAAFVLHANHANEFD
SAVDMAMHALRDTGAQLLNQAVLLGGVNDSVDALAALSERSFAAGVLPYYLHQLDRVAGVAHFEVDDARARALHTELATR
LSGYLVPRLVREIPGDTGKRPL

Sequences:

>Translated_342_residues
MITAAPRALQPSPPPALQPSRWQQQWRDAVRDPRVLLELLGLDAQAAAISDAAAAQFPLRVPRAFVARMRHGDLHDPLLR
QVLPLDAEMQPVPGFGLDAVGDAAAKTAAGVIQKYRGRALLIATGSCAVHCRYCFRRHFPYAEETAARDGWREAVAAIAA
DPGIDEVLLSGGDPLSLATPKLAELTDALAAIPHLKRLRIHSRLPIVLPERVDAPLLAWLRSLPWPAAFVLHANHANEFD
SAVDMAMHALRDTGAQLLNQAVLLGGVNDSVDALAALSERSFAAGVLPYYLHQLDRVAGVAHFEVDDARARALHTELATR
LSGYLVPRLVREIPGDTGKRPL
>Mature_342_residues
MITAAPRALQPSPPPALQPSRWQQQWRDAVRDPRVLLELLGLDAQAAAISDAAAAQFPLRVPRAFVARMRHGDLHDPLLR
QVLPLDAEMQPVPGFGLDAVGDAAAKTAAGVIQKYRGRALLIATGSCAVHCRYCFRRHFPYAEETAARDGWREAVAAIAA
DPGIDEVLLSGGDPLSLATPKLAELTDALAAIPHLKRLRIHSRLPIVLPERVDAPLLAWLRSLPWPAAFVLHANHANEFD
SAVDMAMHALRDTGAQLLNQAVLLGGVNDSVDALAALSERSFAAGVLPYYLHQLDRVAGVAHFEVDDARARALHTELATR
LSGYLVPRLVREIPGDTGKRPL

Specific function: With YjeA might be involved in the post-translational modification of elongation factor P (EF-P) [H]

COG id: COG1509

COG function: function code E; Lysine 2,3-aminomutase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the KamA family [H]

Homologues:

Organism=Escherichia coli, GI1790589, Length=327, Percent_Identity=49.5412844036697, Blast_Score=301, Evalue=5e-83,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003739
- InterPro:   IPR022462
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 37023; Mature: 37023

Theoretical pI: Translated: 7.42; Mature: 7.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITAAPRALQPSPPPALQPSRWQQQWRDAVRDPRVLLELLGLDAQAAAISDAAAAQFPLR
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHCCHH
VPRAFVARMRHGDLHDPLLRQVLPLDAEMQPVPGFGLDAVGDAAAKTAAGVIQKYRGRAL
HHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEE
LIATGSCAVHCRYCFRRHFPYAEETAARDGWREAVAAIAADPGIDEVLLSGGDPLSLATP
EEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCC
KLAELTDALAAIPHLKRLRIHSRLPIVLPERVDAPLLAWLRSLPWPAAFVLHANHANEFD
HHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHCCCCEEEEEECCCCHHHH
SAVDMAMHALRDTGAQLLNQAVLLGGVNDSVDALAALSERSFAAGVLPYYLHQLDRVAGV
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
AHFEVDDARARALHTELATRLSGYLVPRLVREIPGDTGKRPL
CEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MITAAPRALQPSPPPALQPSRWQQQWRDAVRDPRVLLELLGLDAQAAAISDAAAAQFPLR
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHCCHH
VPRAFVARMRHGDLHDPLLRQVLPLDAEMQPVPGFGLDAVGDAAAKTAAGVIQKYRGRAL
HHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEE
LIATGSCAVHCRYCFRRHFPYAEETAARDGWREAVAAIAADPGIDEVLLSGGDPLSLATP
EEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCC
KLAELTDALAAIPHLKRLRIHSRLPIVLPERVDAPLLAWLRSLPWPAAFVLHANHANEFD
HHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHCCCCEEEEEECCCCHHHH
SAVDMAMHALRDTGAQLLNQAVLLGGVNDSVDALAALSERSFAAGVLPYYLHQLDRVAGV
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
AHFEVDDARARALHTELATRLSGYLVPRLVREIPGDTGKRPL
CEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]