| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
Click here to switch to the map view.
The map label for this gene is 84623981
Identifier: 84623981
GI number: 84623981
Start: 2585436
End: 2585816
Strand: Direct
Name: 84623981
Synonym: XOO_2324
Alternate gene names: NA
Gene position: 2585436-2585816 (Clockwise)
Preceding gene: 84623980
Following gene: 84623982
Centisome position: 52.33
GC content: 70.87
Gene sequence:
>381_bases ATGACGCTCGACCCCATACCGGCACCGCGCCCCCTGCCCTTGCAATTATTCGACTGCGTGCAAGCCGATGATCTTGATCG CGCGCTGGCACTCGGCCTGATGGCGTATCTGCCCGACCCGCAACACGACGCGCTGGACGCCGATTGCCAGCAGGTGTGCG CCACGTTGCGGGGTGCACAGCAGCGTTTGCGCGATGCATGGGCCGCGCGCGAACGCTATCGCGCGCGCGCCGCGCGTCTG CAACGCCGCGCCGCCGAGCGTGACGCACGCAGGGCACCCGCTCCGGCACCCAGCCAGCCGGCATTGCCGGCATTGCCGCC GCTGGCCGCCGCCATCCTGGCACGTGCCAAGGCCAAAGCCGCCGGCGGAGCGCAGCCATGA
Upstream 100 bases:
>100_bases CGCAATTTGCGCTGTTGTTCGCCACCGACGACATGCGCGAAGGCACCCGTGCGTTTCTCCACAAGCGCCCTGCTCACTTC AAGAACCGCTGATCATCGCC
Downstream 100 bases:
>100_bases ACGCACCGCAGGCAACGCCACCAGCGCGTCGTGGCAGCAGCATGCGCAAGCCCGAGATACAGGAGATGTTCGAGCGCCTG CGCGAACTCAATCCGCACCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 126; Mature: 125
Protein sequence:
>126_residues MTLDPIPAPRPLPLQLFDCVQADDLDRALALGLMAYLPDPQHDALDADCQQVCATLRGAQQRLRDAWAARERYRARAARL QRRAAERDARRAPAPAPSQPALPALPPLAAAILARAKAKAAGGAQP
Sequences:
>Translated_126_residues MTLDPIPAPRPLPLQLFDCVQADDLDRALALGLMAYLPDPQHDALDADCQQVCATLRGAQQRLRDAWAARERYRARAARL QRRAAERDARRAPAPAPSQPALPALPPLAAAILARAKAKAAGGAQP >Mature_125_residues TLDPIPAPRPLPLQLFDCVQADDLDRALALGLMAYLPDPQHDALDADCQQVCATLRGAQQRLRDAWAARERYRARAARLQ RRAAERDARRAPAPAPSQPALPALPPLAAAILARAKAKAAGGAQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13545; Mature: 13414
Theoretical pI: Translated: 9.96; Mature: 9.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLDPIPAPRPLPLQLFDCVQADDLDRALALGLMAYLPDPQHDALDADCQQVCATLRGAQ CCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH QRLRDAWAARERYRARAARLQRRAAERDARRAPAPAPSQPALPALPPLAAAILARAKAKA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC AGGAQP CCCCCC >Mature Secondary Structure TLDPIPAPRPLPLQLFDCVQADDLDRALALGLMAYLPDPQHDALDADCQQVCATLRGAQ CCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH QRLRDAWAARERYRARAARLQRRAAERDARRAPAPAPSQPALPALPPLAAAILARAKAKA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC AGGAQP CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA