| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is crt [H]
Identifier: 84623980
GI number: 84623980
Start: 2584645
End: 2585427
Strand: Direct
Name: crt [H]
Synonym: XOO_2323
Alternate gene names: 84623980
Gene position: 2584645-2585427 (Clockwise)
Preceding gene: 84623975
Following gene: 84623981
Centisome position: 52.32
GC content: 64.24
Gene sequence:
>783_bases ATGTCCAATCACGTCATTCTGATTGCCGATCACGCCAGCATCCGGACGATTACGGTCAACCGGCCGGACAAACTGAACGC CTTGAACCAGCAGACCATGCAGGCCCTGGATCAGGCGTTTCAGGACGCAGCCGCTGCAGACGACGTACGTGCAGTGATTC TCACCGGCGCTGGCCCCAAGGCGTTCGTGGCAGGCGCAGATATCGCCGAAATGAGTGATCTGTCGGCAATCCAGGGCCGC GCGTTCTCGCTGCTGGGCCAGCAGCTGATGCGCCGGATCGAACGCATGCCTAAGCCGGTGATTGCAATGATCAATGGCTT TGCGCTCGGCGGCGGCCTGGAGCTGGCAATGGCCTGCCATCTGCGCATCGCCGCGACCACCGCGCGCCTGGGGCAACCGG AAATCAACCTGGGCCTGATCCCCGGCTTCGGCGGCACGCAGCGCCTGCTGCGCCTGACCGGCCGCGCGGCAGCGCTGGAA CTGTGCCTGTTCGGCCTGCCGATCGACGCGGCACGCGCACTGCAACTGGGCCTGGTCAATCGCGTGGTCGAAGCGGACGC CTTGCACGAAGAGACCCTGGCGCTTGCGCAACGCTTGGCAACTGCAGCACCGCTGGCACTGCGCGGCATTCTGGATGCGT TGGTGTTCGGCGGCGAGTGCGCCATGGAAGAAGGTCTGCAGCTGGAAACCGCGCAATTTGCGCTGTTGTTCGCCACCGAC GACATGCGCGAAGGCACCCGTGCGTTTCTCCACAAGCGCCCTGCTCACTTCAAGAACCGCTGA
Upstream 100 bases:
>100_bases GCGGCCGCGATACCGAACCGCTACTTATCGCGAAAGCTAGGACCAGCAAGGCTTTCAGAAGTTCCGTATTTACTAATTTT TTACGTCCGCAAGGGTTCAC
Downstream 100 bases:
>100_bases TCATCGCCATGACGCTCGACCCCATACCGGCACCGCGCCCCCTGCCCTTGCAATTATTCGACTGCGTGCAAGCCGATGAT CTTGATCGCGCGCTGGCACT
Product: 3-hydroxybutyryl-CoA dehydratase
Products: NA
Alternate protein names: Crotonase [H]
Number of amino acids: Translated: 260; Mature: 259
Protein sequence:
>260_residues MSNHVILIADHASIRTITVNRPDKLNALNQQTMQALDQAFQDAAAADDVRAVILTGAGPKAFVAGADIAEMSDLSAIQGR AFSLLGQQLMRRIERMPKPVIAMINGFALGGGLELAMACHLRIAATTARLGQPEINLGLIPGFGGTQRLLRLTGRAAALE LCLFGLPIDAARALQLGLVNRVVEADALHEETLALAQRLATAAPLALRGILDALVFGGECAMEEGLQLETAQFALLFATD DMREGTRAFLHKRPAHFKNR
Sequences:
>Translated_260_residues MSNHVILIADHASIRTITVNRPDKLNALNQQTMQALDQAFQDAAAADDVRAVILTGAGPKAFVAGADIAEMSDLSAIQGR AFSLLGQQLMRRIERMPKPVIAMINGFALGGGLELAMACHLRIAATTARLGQPEINLGLIPGFGGTQRLLRLTGRAAALE LCLFGLPIDAARALQLGLVNRVVEADALHEETLALAQRLATAAPLALRGILDALVFGGECAMEEGLQLETAQFALLFATD DMREGTRAFLHKRPAHFKNR >Mature_259_residues SNHVILIADHASIRTITVNRPDKLNALNQQTMQALDQAFQDAAAADDVRAVILTGAGPKAFVAGADIAEMSDLSAIQGRA FSLLGQQLMRRIERMPKPVIAMINGFALGGGLELAMACHLRIAATTARLGQPEINLGLIPGFGGTQRLLRLTGRAAALEL CLFGLPIDAARALQLGLVNRVVEADALHEETLALAQRLATAAPLALRGILDALVFGGECAMEEGLQLETAQFALLFATDD MREGTRAFLHKRPAHFKNR
Specific function: Could Possibly Oxidizes Fatty Acids Using Specific Components (By Similarity). [C]
COG id: COG1024
COG function: function code I; Enoyl-CoA hydratase/carnithine racemase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Homo sapiens, GI194097323, Length=263, Percent_Identity=39.1634980988593, Blast_Score=172, Evalue=4e-43, Organism=Homo sapiens, GI20127408, Length=175, Percent_Identity=37.7142857142857, Blast_Score=125, Evalue=4e-29, Organism=Homo sapiens, GI68989263, Length=190, Percent_Identity=41.0526315789474, Blast_Score=124, Evalue=6e-29, Organism=Homo sapiens, GI4502327, Length=253, Percent_Identity=35.5731225296443, Blast_Score=118, Evalue=6e-27, Organism=Homo sapiens, GI31542718, Length=247, Percent_Identity=30.7692307692308, Blast_Score=105, Evalue=4e-23, Organism=Homo sapiens, GI70995211, Length=250, Percent_Identity=29.6, Blast_Score=103, Evalue=2e-22, Organism=Homo sapiens, GI157694516, Length=228, Percent_Identity=28.5087719298246, Blast_Score=97, Evalue=1e-20, Organism=Homo sapiens, GI213417737, Length=228, Percent_Identity=28.5087719298246, Blast_Score=97, Evalue=1e-20, Organism=Homo sapiens, GI261878539, Length=93, Percent_Identity=52.6881720430108, Blast_Score=90, Evalue=3e-18, Organism=Homo sapiens, GI157694520, Length=185, Percent_Identity=30.2702702702703, Blast_Score=86, Evalue=2e-17, Organism=Homo sapiens, GI37594469, Length=206, Percent_Identity=29.6116504854369, Blast_Score=80, Evalue=1e-15, Organism=Homo sapiens, GI37594471, Length=206, Percent_Identity=29.6116504854369, Blast_Score=80, Evalue=1e-15, Organism=Homo sapiens, GI150378541, Length=248, Percent_Identity=30.6451612903226, Blast_Score=79, Evalue=3e-15, Organism=Homo sapiens, GI45643119, Length=209, Percent_Identity=26.3157894736842, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI260275230, Length=209, Percent_Identity=26.3157894736842, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI260274832, Length=209, Percent_Identity=26.3157894736842, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI62530384, Length=202, Percent_Identity=28.7128712871287, Blast_Score=67, Evalue=1e-11, Organism=Escherichia coli, GI1787659, Length=257, Percent_Identity=40.0778210116732, Blast_Score=164, Evalue=4e-42, Organism=Escherichia coli, GI1788597, Length=247, Percent_Identity=36.0323886639676, Blast_Score=137, Evalue=9e-34, Organism=Escherichia coli, GI1788682, Length=201, Percent_Identity=40.7960199004975, Blast_Score=129, Evalue=2e-31, Organism=Escherichia coli, GI87082183, Length=263, Percent_Identity=33.0798479087452, Blast_Score=125, Evalue=3e-30, Organism=Escherichia coli, GI221142681, Length=258, Percent_Identity=33.7209302325581, Blast_Score=123, Evalue=1e-29, Organism=Escherichia coli, GI1790281, Length=180, Percent_Identity=35.5555555555556, Blast_Score=109, Evalue=2e-25, Organism=Escherichia coli, GI1787660, Length=263, Percent_Identity=33.8403041825095, Blast_Score=108, Evalue=5e-25, Organism=Caenorhabditis elegans, GI17554946, Length=253, Percent_Identity=38.7351778656126, Blast_Score=173, Evalue=8e-44, Organism=Caenorhabditis elegans, GI25145438, Length=244, Percent_Identity=38.9344262295082, Blast_Score=165, Evalue=3e-41, Organism=Caenorhabditis elegans, GI17540714, Length=228, Percent_Identity=35.5263157894737, Blast_Score=139, Evalue=2e-33, Organism=Caenorhabditis elegans, GI17534483, Length=255, Percent_Identity=29.8039215686275, Blast_Score=117, Evalue=7e-27, Organism=Caenorhabditis elegans, GI17558304, Length=182, Percent_Identity=35.7142857142857, Blast_Score=114, Evalue=6e-26, Organism=Caenorhabditis elegans, GI17508953, Length=181, Percent_Identity=36.4640883977901, Blast_Score=110, Evalue=5e-25, Organism=Caenorhabditis elegans, GI17508951, Length=181, Percent_Identity=36.4640883977901, Blast_Score=110, Evalue=6e-25, Organism=Caenorhabditis elegans, GI25144276, Length=181, Percent_Identity=36.4640883977901, Blast_Score=110, Evalue=6e-25, Organism=Caenorhabditis elegans, GI17536985, Length=275, Percent_Identity=27.2727272727273, Blast_Score=108, Evalue=2e-24, Organism=Caenorhabditis elegans, GI17560910, Length=257, Percent_Identity=28.0155642023346, Blast_Score=97, Evalue=6e-21, Organism=Caenorhabditis elegans, GI25144157, Length=196, Percent_Identity=32.6530612244898, Blast_Score=94, Evalue=6e-20, Organism=Caenorhabditis elegans, GI25144160, Length=196, Percent_Identity=32.6530612244898, Blast_Score=94, Evalue=8e-20, Organism=Caenorhabditis elegans, GI17549921, Length=210, Percent_Identity=30.4761904761905, Blast_Score=91, Evalue=4e-19, Organism=Caenorhabditis elegans, GI17540306, Length=255, Percent_Identity=30.5882352941176, Blast_Score=89, Evalue=3e-18, Organism=Caenorhabditis elegans, GI25141363, Length=208, Percent_Identity=24.5192307692308, Blast_Score=67, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6320241, Length=222, Percent_Identity=30.1801801801802, Blast_Score=100, Evalue=2e-22, Organism=Drosophila melanogaster, GI20129971, Length=248, Percent_Identity=42.741935483871, Blast_Score=188, Evalue=2e-48, Organism=Drosophila melanogaster, GI24653477, Length=248, Percent_Identity=42.741935483871, Blast_Score=188, Evalue=2e-48, Organism=Drosophila melanogaster, GI24653139, Length=249, Percent_Identity=34.5381526104418, Blast_Score=139, Evalue=1e-33, Organism=Drosophila melanogaster, GI19922422, Length=260, Percent_Identity=26.9230769230769, Blast_Score=108, Evalue=3e-24, Organism=Drosophila melanogaster, GI19920382, Length=224, Percent_Identity=30.3571428571429, Blast_Score=103, Evalue=2e-22, Organism=Drosophila melanogaster, GI24583077, Length=172, Percent_Identity=39.5348837209302, Blast_Score=97, Evalue=1e-20, Organism=Drosophila melanogaster, GI24583079, Length=172, Percent_Identity=39.5348837209302, Blast_Score=97, Evalue=1e-20, Organism=Drosophila melanogaster, GI19921000, Length=175, Percent_Identity=38.8571428571429, Blast_Score=96, Evalue=2e-20, Organism=Drosophila melanogaster, GI21357171, Length=254, Percent_Identity=31.496062992126, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI24650670, Length=252, Percent_Identity=30.1587301587302, Blast_Score=86, Evalue=2e-17, Organism=Drosophila melanogaster, GI28571730, Length=195, Percent_Identity=27.1794871794872, Blast_Score=75, Evalue=5e-14, Organism=Drosophila melanogaster, GI28571729, Length=195, Percent_Identity=27.1794871794872, Blast_Score=75, Evalue=6e-14, Organism=Drosophila melanogaster, GI24654903, Length=234, Percent_Identity=24.7863247863248, Blast_Score=74, Evalue=9e-14, Organism=Drosophila melanogaster, GI24583165, Length=204, Percent_Identity=29.4117647058824, Blast_Score=66, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014748 - InterPro: IPR001753 - InterPro: IPR018376 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.2.1.55 [H]
Molecular weight: Translated: 27776; Mature: 27645
Theoretical pI: Translated: 7.13; Mature: 7.13
Prosite motif: PS00166 ENOYL_COA_HYDRATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNHVILIADHASIRTITVNRPDKLNALNQQTMQALDQAFQDAAAADDVRAVILTGAGPK CCCCEEEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCC AFVAGADIAEMSDLSAIQGRAFSLLGQQLMRRIERMPKPVIAMINGFALGGGLELAMACH CEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCEEECCCHHHHHHHH LRIAATTARLGQPEINLGLIPGFGGTQRLLRLTGRAAALELCLFGLPIDAARALQLGLVN HHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH RVVEADALHEETLALAQRLATAAPLALRGILDALVFGGECAMEEGLQLETAQFALLFATD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCEEEHEEEEEEEECC DMREGTRAFLHKRPAHFKNR CHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SNHVILIADHASIRTITVNRPDKLNALNQQTMQALDQAFQDAAAADDVRAVILTGAGPK CCCEEEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCC AFVAGADIAEMSDLSAIQGRAFSLLGQQLMRRIERMPKPVIAMINGFALGGGLELAMACH CEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCEEECCCHHHHHHHH LRIAATTARLGQPEINLGLIPGFGGTQRLLRLTGRAAALELCLFGLPIDAARALQLGLVN HHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH RVVEADALHEETLALAQRLATAAPLALRGILDALVFGGECAMEEGLQLETAQFALLFATD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCEEEHEEEEEEEECC DMREGTRAFLHKRPAHFKNR CHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8655474; 11466286 [H]