| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is pgl [H]
Identifier: 84623850
GI number: 84623850
Start: 2432132
End: 2432851
Strand: Direct
Name: pgl [H]
Synonym: XOO_2193
Alternate gene names: 84623850
Gene position: 2432132-2432851 (Clockwise)
Preceding gene: 84623849
Following gene: 84623851
Centisome position: 49.23
GC content: 66.67
Gene sequence:
>720_bases ATGAATCTGCAGGACAACCCGCGCATCACCCTGGTGCGCTACGACGACCCGGCCGAATGGAACGAAGCGGTGGCCAGCGA AATGGTGGATCTGCTGGAACAGGAGATTTCGCGTCGCGGCCAGGCACGCATGTTGCTGTCCGGCGGCACCACGCCAGCGC CGGTGTACGAGTCCCTCGCCCATCACCCGCTGGATTGGTCGCGGGTGGAAGTAGGCCTGGTCGATGAGCGCTGGTTGTCG CCGCAGGACCAGGACAGCAATGCCTGGCTGGTCAATCACAGCTTCCTGACCCACGCGCGAGCTGCCACTTTCATCCCGCT GGTGCGCCCGGGCAAGCAACTGCCCGAGTGCGTGCACACCGCGAATCTGCAGGCCACACATGCCGAGCCGGCCTGTCTGG CGGTGCTCGGCATGGGGGGCGACGGGCATACCGCCTCCTTGTTCCCGGGTGCCACCGACCTGCCGAAGGCGCTTGCCAGC CCGCAGCCGTATGCATCGCTGGATGCCACCGGCTGCCCGGGTTCGAACCAGTGGCCGCTGCGCATCACCCTGACGCCCGC AGGGCTGGCCGGTATTCCAACGCGCCTGCTGCTGTTGCGTGGCAAGCAGAAGCTGGAGGTGCTGCAGGCCGCGTTGGCCG GCGACGACATCAATGCGTATCCAATCCGCGTGGCACTGCAGCAGCCCGGTCCGCGGTTGCGGGTGCATTGGTGTCCTTGA
Upstream 100 bases:
>100_bases CGCGGGTGCCGTCGCTGGCGGTCATGCACCCGCATGCCGGCCTGCTCGGCGCCGCCGCGTATGCGGTGGATGCACAACGT CAGCCCCCCGGGGAACAGCG
Downstream 100 bases:
>100_bases GTGCGAGTCGTTTGATGCGAGTCCCTCGCAACAACCCGCACATCCATGTGCGGGGAATTAAAAGAGCTTCTCCTTCCCAC CGTTTCTCATAGCCGGTAGC
Product: 6-phosphogluconolactonase
Products: NA
Alternate protein names: 6PGL [H]
Number of amino acids: Translated: 239; Mature: 239
Protein sequence:
>239_residues MNLQDNPRITLVRYDDPAEWNEAVASEMVDLLEQEISRRGQARMLLSGGTTPAPVYESLAHHPLDWSRVEVGLVDERWLS PQDQDSNAWLVNHSFLTHARAATFIPLVRPGKQLPECVHTANLQATHAEPACLAVLGMGGDGHTASLFPGATDLPKALAS PQPYASLDATGCPGSNQWPLRITLTPAGLAGIPTRLLLLRGKQKLEVLQAALAGDDINAYPIRVALQQPGPRLRVHWCP
Sequences:
>Translated_239_residues MNLQDNPRITLVRYDDPAEWNEAVASEMVDLLEQEISRRGQARMLLSGGTTPAPVYESLAHHPLDWSRVEVGLVDERWLS PQDQDSNAWLVNHSFLTHARAATFIPLVRPGKQLPECVHTANLQATHAEPACLAVLGMGGDGHTASLFPGATDLPKALAS PQPYASLDATGCPGSNQWPLRITLTPAGLAGIPTRLLLLRGKQKLEVLQAALAGDDINAYPIRVALQQPGPRLRVHWCP >Mature_239_residues MNLQDNPRITLVRYDDPAEWNEAVASEMVDLLEQEISRRGQARMLLSGGTTPAPVYESLAHHPLDWSRVEVGLVDERWLS PQDQDSNAWLVNHSFLTHARAATFIPLVRPGKQLPECVHTANLQATHAEPACLAVLGMGGDGHTASLFPGATDLPKALAS PQPYASLDATGCPGSNQWPLRITLTPAGLAGIPTRLLLLRGKQKLEVLQAALAGDDINAYPIRVALQQPGPRLRVHWCP
Specific function: Hydrolysis of 6-phosphogluconolactone to 6- phosphogluconate [H]
COG id: COG0363
COG function: function code G; 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. 6-phosphogluconolactonase subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005900 [H]
Pfam domain/function: NA
EC number: =3.1.1.31 [H]
Molecular weight: Translated: 25985; Mature: 25985
Theoretical pI: Translated: 6.30; Mature: 6.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLQDNPRITLVRYDDPAEWNEAVASEMVDLLEQEISRRGQARMLLSGGTTPAPVYESLA CCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHH HHPLDWSRVEVGLVDERWLSPQDQDSNAWLVNHSFLTHARAATFIPLVRPGKQLPECVHT CCCCCCCEEEEEEEHHHCCCCCCCCCCEEEEECHHHHHHHHHHEEECCCCCHHHHHHHHH ANLQATHAEPACLAVLGMGGDGHTASLFPGATDLPKALASPQPYASLDATGCPGSNQWPL CCCEECCCCCEEEEEEECCCCCCEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCE RITLTPAGLAGIPTRLLLLRGKQKLEVLQAALAGDDINAYPIRVALQQPGPRLRVHWCP EEEECCCCCCCCCHHHHHHCCHHHHHHHHHHHCCCCCCCEEEEEEEECCCCEEEEEECC >Mature Secondary Structure MNLQDNPRITLVRYDDPAEWNEAVASEMVDLLEQEISRRGQARMLLSGGTTPAPVYESLA CCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHH HHPLDWSRVEVGLVDERWLSPQDQDSNAWLVNHSFLTHARAATFIPLVRPGKQLPECVHT CCCCCCCEEEEEEEHHHCCCCCCCCCCEEEEECHHHHHHHHHHEEECCCCCHHHHHHHHH ANLQATHAEPACLAVLGMGGDGHTASLFPGATDLPKALASPQPYASLDATGCPGSNQWPL CCCEECCCCCEEEEEEECCCCCCEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCE RITLTPAGLAGIPTRLLLLRGKQKLEVLQAALAGDDINAYPIRVALQQPGPRLRVHWCP EEEECCCCCCCCCHHHHHHCCHHHHHHHHHHHCCCCCCCEEEEEEEECCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10910347 [H]