| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84623837
Identifier: 84623837
GI number: 84623837
Start: 2419480
End: 2420358
Strand: Direct
Name: 84623837
Synonym: XOO_2180
Alternate gene names: NA
Gene position: 2419480-2420358 (Clockwise)
Preceding gene: 84623836
Following gene: 84623846
Centisome position: 48.98
GC content: 63.03
Gene sequence:
>879_bases TTGCCGATCACGCACGTGTTCTTCTGCACGTGGACGCGTCGCGCTACTGAGCGCGAAAACGTCGAAGCCAATGGCGCGAT GATGCGGCACCTATGCGATGCGCTCCGCGATGCGCCGCTGCAGCACATGGTGCTTGTCACTGGCACCAAGCATTACCTGG GCGCGTTCGAAAATTACGGCAGCGGCAAGGCGGAGACGCCGTTCCGCGAAAGCGAGCCGCGCCAGCCGGGCGAAAACTTC TACTACACGCTGGAAGACCTGTTGTTCGCACATGCGCAGCAGCATGGTTTCGGCTGGAGCGTGCATCGCTCGCACACCAT CATCGGCATGGCCAACGGCAGCAATGCCATGAACATGGGCGTGACGCTGGCGGTGTATGCATCGCTGTGCAAGCACACCG GGCAACCGTTCGTATTTCCAGGCTCGCAAGCACAGTGGAACAGCCTCACCGACCTCACCGATGCAGGGCTGCTTGGCCGC CAACTGGCCTGGGCCGTGCTTAGCCCCGCGGCGCGCAATCAGGCCTTCAACACCGTCAATGGCGATGTGTTCCGATGGCG CTGGATGTGGGGCGAGATGGCGACGTTCTTCGAACTCGACGCTGCGCCCTGCCCCGCTGTGCCGGAACCGCTGGAACCAC GCATGCGCCAGACCGCACCTGCCCTGTGGGCGGAACTGGCCGCGCAACACGGCCTGGTGGAAGCGGACGTCAATCGACTC GCGTCGTGGTGGCACACCGACGCCGACCTCGGGCGTGAGATCGAGTGCGTCAACGACATGACCAAGAGCCGCGAACTGGG CTTTATGGACTTCTACGACAGCCGCGCCTCGTTCTTCGAACTGTTCACCCGGCTGCGGGCATTGCGCATCATTCCTTGA
Upstream 100 bases:
>100_bases CGTGTACGGCCTTGCACGTCGACCACTGCCCCACGACTGCGTCATCCCGATCGCGGCAGACCTACTGGACGCCTAAAGCA CCAGCAACGCACTGCGGGGC
Downstream 100 bases:
>100_bases CCGATGCAGCCAGATACGGTTCCAGGATTTCAGGGCTGCGCACAATCGCGCGCTGCGACTGCGCTGCACTATGCGACCGC GTTCGTCTAGCGAACACAGC
Product: hypothetical protein
Products: NA
Alternate protein names: Oxidoreductase/Nucleoside-Diphosphate-Sugar Epimerase; Aldo-Keto Reductase Family Protein; Oxidoreductase; UDP-Glucose 4-Epimerase; Nucleoside-Diphosphate-Sugar Epimerase; Short-Chain Dehydrogenase/Reductase Sdr; Short Chain Dehydrogenase Family Protein; NAD Dependent Epimerase; NAD-Dependent Epimerase/Dehydratase Family Protein; NAD Dependent Epimerase/Dehydratase Family Protein; Nucleoside-Diphosphate-Sugar Epimerase Protein; NAD Dependent Epimerase/Dehydratase
Number of amino acids: Translated: 292; Mature: 291
Protein sequence:
>292_residues MPITHVFFCTWTRRATERENVEANGAMMRHLCDALRDAPLQHMVLVTGTKHYLGAFENYGSGKAETPFRESEPRQPGENF YYTLEDLLFAHAQQHGFGWSVHRSHTIIGMANGSNAMNMGVTLAVYASLCKHTGQPFVFPGSQAQWNSLTDLTDAGLLGR QLAWAVLSPAARNQAFNTVNGDVFRWRWMWGEMATFFELDAAPCPAVPEPLEPRMRQTAPALWAELAAQHGLVEADVNRL ASWWHTDADLGREIECVNDMTKSRELGFMDFYDSRASFFELFTRLRALRIIP
Sequences:
>Translated_292_residues MPITHVFFCTWTRRATERENVEANGAMMRHLCDALRDAPLQHMVLVTGTKHYLGAFENYGSGKAETPFRESEPRQPGENF YYTLEDLLFAHAQQHGFGWSVHRSHTIIGMANGSNAMNMGVTLAVYASLCKHTGQPFVFPGSQAQWNSLTDLTDAGLLGR QLAWAVLSPAARNQAFNTVNGDVFRWRWMWGEMATFFELDAAPCPAVPEPLEPRMRQTAPALWAELAAQHGLVEADVNRL ASWWHTDADLGREIECVNDMTKSRELGFMDFYDSRASFFELFTRLRALRIIP >Mature_291_residues PITHVFFCTWTRRATERENVEANGAMMRHLCDALRDAPLQHMVLVTGTKHYLGAFENYGSGKAETPFRESEPRQPGENFY YTLEDLLFAHAQQHGFGWSVHRSHTIIGMANGSNAMNMGVTLAVYASLCKHTGQPFVFPGSQAQWNSLTDLTDAGLLGRQ LAWAVLSPAARNQAFNTVNGDVFRWRWMWGEMATFFELDAAPCPAVPEPLEPRMRQTAPALWAELAAQHGLVEADVNRLA SWWHTDADLGREIECVNDMTKSRELGFMDFYDSRASFFELFTRLRALRIIP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33031; Mature: 32900
Theoretical pI: Translated: 6.28; Mature: 6.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPITHVFFCTWTRRATERENVEANGAMMRHLCDALRDAPLQHMVLVTGTKHYLGAFENYG CCCEEEEEEECCCCCCHHCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHCC SGKAETPFRESEPRQPGENFYYTLEDLLFAHAQQHGFGWSVHRSHTIIGMANGSNAMNMG CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCEEEEEEECCCCCHHHH VTLAVYASLCKHTGQPFVFPGSQAQWNSLTDLTDAGLLGRQLAWAVLSPAARNQAFNTVN HHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCC GDVFRWRWMWGEMATFFELDAAPCPAVPEPLEPRMRQTAPALWAELAAQHGLVEADVNRL CCEEEEEEHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHH ASWWHTDADLGREIECVNDMTKSRELGFMDFYDSRASFFELFTRLRALRIIP HHHHCCCHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PITHVFFCTWTRRATERENVEANGAMMRHLCDALRDAPLQHMVLVTGTKHYLGAFENYG CCEEEEEEECCCCCCHHCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHCC SGKAETPFRESEPRQPGENFYYTLEDLLFAHAQQHGFGWSVHRSHTIIGMANGSNAMNMG CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCEEEEEEECCCCCHHHH VTLAVYASLCKHTGQPFVFPGSQAQWNSLTDLTDAGLLGRQLAWAVLSPAARNQAFNTVN HHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCC GDVFRWRWMWGEMATFFELDAAPCPAVPEPLEPRMRQTAPALWAELAAQHGLVEADVNRL CCEEEEEEHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHH ASWWHTDADLGREIECVNDMTKSRELGFMDFYDSRASFFELFTRLRALRIIP HHHHCCCHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA