Click here to switch to the map view.

The map label for this gene is 84623836

Identifier: 84623836

GI number: 84623836

Start: 2418139

End: 2419137

Strand: Direct

Name: 84623836

Synonym: XOO_2179

Alternate gene names: NA

Gene position: 2418139-2419137 (Clockwise)

Preceding gene: 84623825

Following gene: 84623837

Centisome position: 48.95

GC content: 62.86

Gene sequence:

>999_bases
ATGCTAGGACCGTCGCTCCACCGAGACCAGATCATGGCCATGAATCGTGTGCAGTTCCAAGCCGGGCTGTCGTTGCCGGC
GTTCCTCAAGCGCTATGGCAACGCGCAGCAGTGCGAGCAGGCGTTGGAGATCTCGCGCTGGCCACAGGGCTTTGTTTGTC
CGCGTTGCGCCGCTACCGCGCACAGTCGATTCCAGCGTCACGGCACCACGTACTGGCAGTGCACGGCCTGCTATCGCCAG
ACCAGCCTGCGCTCGGGCACGGTGATGGACAACAGCAAGCTGCCGCTACGCACCTGGCTGCTTGGCATGTATCTGCTGGG
CCAGAGCAAGACGAACCTGTCGGCGCTGGAGTTGATGCGACACCTGGGAGTGAGCTACCCGACAGCGTGGCCAATGAAGC
ACAAGCTGATGCAGGCCATGACCCAACGCGAGGCGAACCGCAAGTTGGGCGGGATCGTGCAACTGGACGATGCCTACCTG
GGCGGAGAACGCAACGGTGGCAAGGCCGGGCGCGGCTCGGAGAACAAGCGCCCTTTCGTGATCGCCGTGGAGACCACTGA
AGACGGTCGTCCATTGCGCGCGGTGATGGATCCGGTCCCAGGCTTCACCAAGGCGGCGCTGTCGGAATGGATCGGGCAAC
GCCTGCATCCTGGAGCAGATGTCTACAGTGATGGACTCGGTGCGTTTCGAGCACTGGAAGCCGACCACGCGCACACCGTG
ATCGAAGGCAGCGGTCGAAGTCGCTGCGAGGCAGAGAACGCACGCTGGGTCAACGTGGTGTTGTCCAACCTAAAGCGTTC
GCTGGACGGTGCCTATCACGCCTTCAAATTCGCCAAATACGCCCAGCGCTACCTGGCAGAGACAATGTGGCGGTTCAACC
GCCGTTTCGATCTGACCCGGCTGGTGCCCAGCTTGCTGGCCGCCGCAGCCGCCAGCAAGCCGTGGTCCGAGCGGGCCCTG
CGTGATGTCACCATGTTCACCGCTGAAAGTGCGTGCTAA

Upstream 100 bases:

>100_bases
AACGACCGCACCACAGCACTCCGTACGCAGCAATGACTTCATGGGACCTGATTAGCACGATCTTTCAGCACAGTCGCAGC
CAGTGAGAGCCGACCGGTCG

Downstream 100 bases:

>100_bases
TCAGGTGATGGGATGCATAGAACAGTGCGTCAATGGAGGCGAATGCCCTGCAGCAAATCGACCGATCAACGATGTCGGCA
CACCTCTCGCTCGTCGTCGC

Product: ISXo5 transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 332; Mature: 332

Protein sequence:

>332_residues
MLGPSLHRDQIMAMNRVQFQAGLSLPAFLKRYGNAQQCEQALEISRWPQGFVCPRCAATAHSRFQRHGTTYWQCTACYRQ
TSLRSGTVMDNSKLPLRTWLLGMYLLGQSKTNLSALELMRHLGVSYPTAWPMKHKLMQAMTQREANRKLGGIVQLDDAYL
GGERNGGKAGRGSENKRPFVIAVETTEDGRPLRAVMDPVPGFTKAALSEWIGQRLHPGADVYSDGLGAFRALEADHAHTV
IEGSGRSRCEAENARWVNVVLSNLKRSLDGAYHAFKFAKYAQRYLAETMWRFNRRFDLTRLVPSLLAAAAASKPWSERAL
RDVTMFTAESAC

Sequences:

>Translated_332_residues
MLGPSLHRDQIMAMNRVQFQAGLSLPAFLKRYGNAQQCEQALEISRWPQGFVCPRCAATAHSRFQRHGTTYWQCTACYRQ
TSLRSGTVMDNSKLPLRTWLLGMYLLGQSKTNLSALELMRHLGVSYPTAWPMKHKLMQAMTQREANRKLGGIVQLDDAYL
GGERNGGKAGRGSENKRPFVIAVETTEDGRPLRAVMDPVPGFTKAALSEWIGQRLHPGADVYSDGLGAFRALEADHAHTV
IEGSGRSRCEAENARWVNVVLSNLKRSLDGAYHAFKFAKYAQRYLAETMWRFNRRFDLTRLVPSLLAAAAASKPWSERAL
RDVTMFTAESAC
>Mature_332_residues
MLGPSLHRDQIMAMNRVQFQAGLSLPAFLKRYGNAQQCEQALEISRWPQGFVCPRCAATAHSRFQRHGTTYWQCTACYRQ
TSLRSGTVMDNSKLPLRTWLLGMYLLGQSKTNLSALELMRHLGVSYPTAWPMKHKLMQAMTQREANRKLGGIVQLDDAYL
GGERNGGKAGRGSENKRPFVIAVETTEDGRPLRAVMDPVPGFTKAALSEWIGQRLHPGADVYSDGLGAFRALEADHAHTV
IEGSGRSRCEAENARWVNVVLSNLKRSLDGAYHAFKFAKYAQRYLAETMWRFNRRFDLTRLVPSLLAAAAASKPWSERAL
RDVTMFTAESAC

Specific function: Unknown

COG id: COG3677

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003220 [H]

Pfam domain/function: PF03811 Ins_element1 [H]

EC number: NA

Molecular weight: Translated: 37186; Mature: 37186

Theoretical pI: Translated: 10.18; Mature: 10.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGPSLHRDQIMAMNRVQFQAGLSLPAFLKRYGNAQQCEQALEISRWPQGFVCPRCAATA
CCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHH
HSRFQRHGTTYWQCTACYRQTSLRSGTVMDNSKLPLRTWLLGMYLLGQSKTNLSALELMR
HHHHHHCCCCEEEHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHH
HLGVSYPTAWPMKHKLMQAMTQREANRKLGGIVQLDDAYLGGERNGGKAGRGSENKRPFV
HCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCCCEE
IAVETTEDGRPLRAVMDPVPGFTKAALSEWIGQRLHPGADVYSDGLGAFRALEADHAHTV
EEEEECCCCCHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHCCCCCCEE
IEGSGRSRCEAENARWVNVVLSNLKRSLDGAYHAFKFAKYAQRYLAETMWRFNRRFDLTR
EECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
LVPSLLAAAAASKPWSERALRDVTMFTAESAC
HHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLGPSLHRDQIMAMNRVQFQAGLSLPAFLKRYGNAQQCEQALEISRWPQGFVCPRCAATA
CCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHH
HSRFQRHGTTYWQCTACYRQTSLRSGTVMDNSKLPLRTWLLGMYLLGQSKTNLSALELMR
HHHHHHCCCCEEEHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHH
HLGVSYPTAWPMKHKLMQAMTQREANRKLGGIVQLDDAYLGGERNGGKAGRGSENKRPFV
HCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCCCEE
IAVETTEDGRPLRAVMDPVPGFTKAALSEWIGQRLHPGADVYSDGLGAFRALEADHAHTV
EEEEECCCCCHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHCCCCCCEE
IEGSGRSRCEAENARWVNVVLSNLKRSLDGAYHAFKFAKYAQRYLAETMWRFNRRFDLTR
EECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
LVPSLLAAAAASKPWSERALRDVTMFTAESAC
HHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 6306577; 9847077; 11016950 [H]