| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is hisH [H]
Identifier: 84623779
GI number: 84623779
Start: 2348887
End: 2349489
Strand: Direct
Name: hisH [H]
Synonym: XOO_2122
Alternate gene names: 84623779
Gene position: 2348887-2349489 (Clockwise)
Preceding gene: 84623778
Following gene: 84623780
Centisome position: 47.55
GC content: 64.18
Gene sequence:
>603_bases ATGACCGATGTTGCGCTGATCGATGCCGGTGGCGCCAATCTGGGCTCGGTGCGCTATGCATTGGAGCGACTGGGCGTTGA GGCACGCGTGGTGCGCGATGCAGCCGGCTTGCAGGGCGCGCAGCGGGTGATACTGCCTGGTGTTGGCGCTGCGCCAGAGG TGATGTCGCGTTTGCGCGCGCAGGGCTTGGTCGCGCCATTGCGCGAGCTGCAGGTGCCGTTGATCGGTATCTGCTTAGGG ATGCAGTTGCTGTTCGAACATTCCGAAGAAGGCGATGTCGAGTGCCTGGGTCTGCTGCCGGGCATCGTGCGGCATATGAC GCCTGCGCTTGGCATTCGTGTGCCGCATATGGGCTGGAATCGGCTGGTGCCGATGCGCGAATCCGCGTTGCTGGCCGGTT TGCCGGAGCGCGCCAGTGCGTATTTCGTGCATGGTTACGCGGCGCCGGTCACGGCCGACACCGTGGCTGCCTGCGATCAC GGCGGCCTGTTCACTGCCATCGTGCAGAACGGCTTGCGCTGCGGCGCGCAGTTTCACCCTGAGCGGTCGGCCGACACCGG TGCACGCATCCTGCACAATTTTCTTGAGATGAGCTTCCCATGA
Upstream 100 bases:
>100_bases ATCACCACAAGGTCGAGGCCTGCTTCAAGGCGTTGGCGCGTGCATTGCGTCAGGCGATTCGCCGTGAGGGCAGCGCATTG CCCACCACCAAGGGCGCGCT
Downstream 100 bases:
>100_bases GTTTCACCGTTTACCCGGCGCTGGATATTCGCAATGGCCGCGTGGTGCGCTTGCTGCAGGGCGATTACGCACGCGAAACG CACTACGGCAACGACGTGCT
Product: imidazole glycerol phosphate synthase subunit HisH
Products: D-erythro-imidazole-glycerol-phosphate; AICAR; L-glutamate [C]
Alternate protein names: IGP synthase glutamine amidotransferase subunit; IGP synthase subunit hisH; ImGP synthase subunit hisH; IGPS subunit hisH [H]
Number of amino acids: Translated: 200; Mature: 199
Protein sequence:
>200_residues MTDVALIDAGGANLGSVRYALERLGVEARVVRDAAGLQGAQRVILPGVGAAPEVMSRLRAQGLVAPLRELQVPLIGICLG MQLLFEHSEEGDVECLGLLPGIVRHMTPALGIRVPHMGWNRLVPMRESALLAGLPERASAYFVHGYAAPVTADTVAACDH GGLFTAIVQNGLRCGAQFHPERSADTGARILHNFLEMSFP
Sequences:
>Translated_200_residues MTDVALIDAGGANLGSVRYALERLGVEARVVRDAAGLQGAQRVILPGVGAAPEVMSRLRAQGLVAPLRELQVPLIGICLG MQLLFEHSEEGDVECLGLLPGIVRHMTPALGIRVPHMGWNRLVPMRESALLAGLPERASAYFVHGYAAPVTADTVAACDH GGLFTAIVQNGLRCGAQFHPERSADTGARILHNFLEMSFP >Mature_199_residues TDVALIDAGGANLGSVRYALERLGVEARVVRDAAGLQGAQRVILPGVGAAPEVMSRLRAQGLVAPLRELQVPLIGICLGM QLLFEHSEEGDVECLGLLPGIVRHMTPALGIRVPHMGWNRLVPMRESALLAGLPERASAYFVHGYAAPVTADTVAACDHG GLFTAIVQNGLRCGAQFHPERSADTGARILHNFLEMSFP
Specific function: IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The hisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to hisF for the synthesis of IGP and AICAR [H]
COG id: COG0118
COG function: function code E; Glutamine amidotransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788334, Length=196, Percent_Identity=45.4081632653061, Blast_Score=164, Evalue=3e-42, Organism=Saccharomyces cerevisiae, GI6319725, Length=214, Percent_Identity=30.8411214953271, Blast_Score=98, Evalue=1e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017926 - InterPro: IPR000991 - InterPro: IPR010139 - InterPro: IPR016226 [H]
Pfam domain/function: PF00117 GATase [H]
EC number: 2.4.2.- [C]
Molecular weight: Translated: 21249; Mature: 21118
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: PS00442 GATASE_TYPE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDVALIDAGGANLGSVRYALERLGVEARVVRDAAGLQGAQRVILPGVGAAPEVMSRLRA CCCEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHH QGLVAPLRELQVPLIGICLGMQLLFEHSEEGDVECLGLLPGIVRHMTPALGIRVPHMGWN HHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCHHHCEECCCCCCC RLVPMRESALLAGLPERASAYFVHGYAAPVTADTVAACDHGGLFTAIVQNGLRCGAQFHP CCCCCCHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHCCCCCHHHHHHHHHHHCCCCCCC ERSADTGARILHNFLEMSFP CCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure TDVALIDAGGANLGSVRYALERLGVEARVVRDAAGLQGAQRVILPGVGAAPEVMSRLRA CCEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHH QGLVAPLRELQVPLIGICLGMQLLFEHSEEGDVECLGLLPGIVRHMTPALGIRVPHMGWN HHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCHHHCEECCCCCCC RLVPMRESALLAGLPERASAYFVHGYAAPVTADTVAACDHGGLFTAIVQNGLRCGAQFHP CCCCCCHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHCCCCCHHHHHHHHHHHCCCCCCC ERSADTGARILHNFLEMSFP CCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: phosphoribulosylformimino-AICAR-P; L-glutamine [C]
Specific reaction: phosphoribulosylformimino-AICAR-P + L-glutamine = D-erythro-imidazole-glycerol-phosphate + AICAR + L-glutamate [C]
General reaction: Transferases; Glycosyltransferases; Pentosyltransferases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12024217 [H]