| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is deaD [H]
Identifier: 84623095
GI number: 84623095
Start: 1562870
End: 1564774
Strand: Direct
Name: deaD [H]
Synonym: XOO_1438
Alternate gene names: 84623095
Gene position: 1562870-1564774 (Clockwise)
Preceding gene: 84623091
Following gene: 84623096
Centisome position: 31.64
GC content: 67.03
Gene sequence:
>1905_bases ATGACCCAAGAATCTTCCGCGCCGCTGCTGTTTGCAGACCTCGGCCTCTCAGGCGCTGTGATGAGGGCCGTTGCCAATGT CGGCTACGAGTCGCCGTCGCCGATCCAGGCTGCCACCATTCCCGCGTTGCTCGCCGGCCGTGACGTCCTCGGCCAGGCCC AGACCGGCACCGGCAAGACCGCCGCGTTCGCGCTGCCGGTGCTGTCCAACGCCGATCTCAACCAGGTCAAGCCGCAGGCA TTGGTGCTGGCCCCGACCCGCGAACTGGCCATCCAGGTCGCCGAGGCGTTCCAGAAGTATGCCGAAGCCATTCCGGGCTT CCGCGTGCTGCCGGTGTACGGCGGCCAGCCGTATGCCCAGCAACTGAGTGCGCTCAAGCGCGGCGTGCATGTCGTGGTCG GTACCCCCGGCCGCGTGATCGATCACCTGGACCGCGGTACGCTGGATCTGTCCCAGCTCAAGACGCTGGTGCTGGACGAA GCCGACGAAATGCTGCGCATGGGCTTTATCGACGACGTCGAAGCGGTACTGAAAAAGTTGCCGGAAAAGCGTCAGGTGGC ATTGTTCTCGGCCACCATGCCGCCGGCCATCCGTCGCATCGCGCAGACCTATCTGAAGGATCCGGCCGAAGTCATCATCG CGGCCAAGACCACCACTTCGGCCAACATCCGCCAACGCTACTGGTGGGTGAGCGGGCTGCATAAGCTGGATGCGCTGACC CGCATTCTCGAGGTCGAGCCGTTCGACGGCATGATCATCTTCGCACGCACCAAGGCCGGCACCGAAGAGCTGGCGCAGAA GCTGCAGGCGCGCGGTCTGGCCGCGGCCGCCATCAATGGCGACATGCAGCAGGCGGCGCGCGAGAAGACCATTGCCCAGC TCAAGGACGGCAAGCTGGACATCCTGGTCGCCACCGACGTGGCCGCACGCGGCCTGGACGTGGAGCGCATCAGCCACGTG CTGAACTACGACATTCCGTACGACACCGAAAGCTATGTGCATCGCATCGGCCGCACCGGCCGTGCCGGACGCACGGGCGA CGCGATCCTGTTCGTGACGCTGCGCGAAAAGGGGATGCTGCGCTCGATCGAACGCGCCACCCGTCAGCCGATCGAAGAGA TGCAGCTGCCGAGCGTGGATGCGGTCAACGACACGCGCGTGGCGCGTTTCATGACCCGTATCACCGAGACCCTGGCCGGC GGCCAGATCGACATGTACCGCGATCTGCTGCAGCGCTATGAGGCCGAAAACAACGTGCCGGCGATCGATATCGCCGCCGC GATGGCCAAGCTGCTGCAGGGCGATGCGCCGTTCCTGCTGACTCCGCCGGTGCGTGGCGCACGCGAAGACGCCGCGCCGC GCGAGCGTCATCAGCGTGCCGATCGTGGCGACCGCCCGCGCTTCGAGCCGAAGTTCGAGCGCGGCCCGCGGGCCGACGGT GAGCGCGCCCCACGTCCGCCGCGTGGCGACGATGCCGGCGGCGAGCGTCCGCGTCGCGATCCGGTCGCCCCGCGTGGGGA GCCGGAATTGGGCATGGAGAGCTATCGCATCGAAGTGGGCCACAGCCATGGCGTGAAGCCGGCCAACATCGTCGGCGCGA TCGCCAACGAAGCCGGGCTGGAAAGCCGCTATATCGGCCGGATCGACATTCAGGACGATTATTCGATCCTGGATCTGCCG GCCGACATGCCGCGCGAACTGCTCACCCACCTGAAGAAAGTCTGGGTGTCCGGTCAGCAGCTCAACATGCGCAAGCTGGA AGAGGGCGAGGCAGCCGCGTCGCCGGCCAAGCCGCGCTTCCCGCGTGGCGGCAAGCCGTCCGGTCGTTCGAACGGCCCGG TCCGTCCGATGGACCGCGCTGGCGCACCGCACCGCAAGGGCCCGCCGAAGCCGCGCGGCGAGTAA
Upstream 100 bases:
>100_bases TGAATGGTCTGTAACGAAAATTTCGACAGCAGGGGGGCTGAGAAGGCACACTATCCGGCTTTGCGCCTGCCGGCTTCGTG CGGCGCCTCCGGAGTTACCC
Downstream 100 bases:
>100_bases GCGTGGCCGGCACCGCCTGCGGGGTCACCCTGCAGGCGGTGTGGTTGCCTAGTATCGCTATGCGTAAATTCGCATAGCGA GCGTGTGACGCGTTACGGTG
Product: ATP-dependent RNA helicase
Products: NA
Alternate protein names: ATP-dependent RNA helicase deaD homolog [H]
Number of amino acids: Translated: 634; Mature: 633
Protein sequence:
>634_residues MTQESSAPLLFADLGLSGAVMRAVANVGYESPSPIQAATIPALLAGRDVLGQAQTGTGKTAAFALPVLSNADLNQVKPQA LVLAPTRELAIQVAEAFQKYAEAIPGFRVLPVYGGQPYAQQLSALKRGVHVVVGTPGRVIDHLDRGTLDLSQLKTLVLDE ADEMLRMGFIDDVEAVLKKLPEKRQVALFSATMPPAIRRIAQTYLKDPAEVIIAAKTTTSANIRQRYWWVSGLHKLDALT RILEVEPFDGMIIFARTKAGTEELAQKLQARGLAAAAINGDMQQAAREKTIAQLKDGKLDILVATDVAARGLDVERISHV LNYDIPYDTESYVHRIGRTGRAGRTGDAILFVTLREKGMLRSIERATRQPIEEMQLPSVDAVNDTRVARFMTRITETLAG GQIDMYRDLLQRYEAENNVPAIDIAAAMAKLLQGDAPFLLTPPVRGAREDAAPRERHQRADRGDRPRFEPKFERGPRADG ERAPRPPRGDDAGGERPRRDPVAPRGEPELGMESYRIEVGHSHGVKPANIVGAIANEAGLESRYIGRIDIQDDYSILDLP ADMPRELLTHLKKVWVSGQQLNMRKLEEGEAAASPAKPRFPRGGKPSGRSNGPVRPMDRAGAPHRKGPPKPRGE
Sequences:
>Translated_634_residues MTQESSAPLLFADLGLSGAVMRAVANVGYESPSPIQAATIPALLAGRDVLGQAQTGTGKTAAFALPVLSNADLNQVKPQA LVLAPTRELAIQVAEAFQKYAEAIPGFRVLPVYGGQPYAQQLSALKRGVHVVVGTPGRVIDHLDRGTLDLSQLKTLVLDE ADEMLRMGFIDDVEAVLKKLPEKRQVALFSATMPPAIRRIAQTYLKDPAEVIIAAKTTTSANIRQRYWWVSGLHKLDALT RILEVEPFDGMIIFARTKAGTEELAQKLQARGLAAAAINGDMQQAAREKTIAQLKDGKLDILVATDVAARGLDVERISHV LNYDIPYDTESYVHRIGRTGRAGRTGDAILFVTLREKGMLRSIERATRQPIEEMQLPSVDAVNDTRVARFMTRITETLAG GQIDMYRDLLQRYEAENNVPAIDIAAAMAKLLQGDAPFLLTPPVRGAREDAAPRERHQRADRGDRPRFEPKFERGPRADG ERAPRPPRGDDAGGERPRRDPVAPRGEPELGMESYRIEVGHSHGVKPANIVGAIANEAGLESRYIGRIDIQDDYSILDLP ADMPRELLTHLKKVWVSGQQLNMRKLEEGEAAASPAKPRFPRGGKPSGRSNGPVRPMDRAGAPHRKGPPKPRGE >Mature_633_residues TQESSAPLLFADLGLSGAVMRAVANVGYESPSPIQAATIPALLAGRDVLGQAQTGTGKTAAFALPVLSNADLNQVKPQAL VLAPTRELAIQVAEAFQKYAEAIPGFRVLPVYGGQPYAQQLSALKRGVHVVVGTPGRVIDHLDRGTLDLSQLKTLVLDEA DEMLRMGFIDDVEAVLKKLPEKRQVALFSATMPPAIRRIAQTYLKDPAEVIIAAKTTTSANIRQRYWWVSGLHKLDALTR ILEVEPFDGMIIFARTKAGTEELAQKLQARGLAAAAINGDMQQAAREKTIAQLKDGKLDILVATDVAARGLDVERISHVL NYDIPYDTESYVHRIGRTGRAGRTGDAILFVTLREKGMLRSIERATRQPIEEMQLPSVDAVNDTRVARFMTRITETLAGG QIDMYRDLLQRYEAENNVPAIDIAAAMAKLLQGDAPFLLTPPVRGAREDAAPRERHQRADRGDRPRFEPKFERGPRADGE RAPRPPRGDDAGGERPRRDPVAPRGEPELGMESYRIEVGHSHGVKPANIVGAIANEAGLESRYIGRIDIQDDYSILDLPA DMPRELLTHLKKVWVSGQQLNMRKLEEGEAAASPAKPRFPRGGKPSGRSNGPVRPMDRAGAPHRKGPPKPRGE
Specific function: Has a helix-destabilizing activity [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI20149629, Length=373, Percent_Identity=39.142091152815, Blast_Score=259, Evalue=7e-69, Organism=Homo sapiens, GI169881239, Length=374, Percent_Identity=41.1764705882353, Blast_Score=258, Evalue=1e-68, Organism=Homo sapiens, GI13514809, Length=374, Percent_Identity=41.1764705882353, Blast_Score=258, Evalue=1e-68, Organism=Homo sapiens, GI7661920, Length=373, Percent_Identity=37.5335120643432, Blast_Score=258, Evalue=1e-68, Organism=Homo sapiens, GI41327771, Length=392, Percent_Identity=38.5204081632653, Blast_Score=257, Evalue=3e-68, Organism=Homo sapiens, GI301171467, Length=378, Percent_Identity=39.4179894179894, Blast_Score=253, Evalue=3e-67, Organism=Homo sapiens, GI87196351, Length=378, Percent_Identity=39.4179894179894, Blast_Score=253, Evalue=3e-67, Organism=Homo sapiens, GI301171475, Length=378, Percent_Identity=39.4179894179894, Blast_Score=253, Evalue=4e-67, Organism=Homo sapiens, GI164664518, Length=354, Percent_Identity=34.4632768361582, Blast_Score=249, Evalue=6e-66, Organism=Homo sapiens, GI4503529, Length=374, Percent_Identity=39.572192513369, Blast_Score=247, Evalue=3e-65, Organism=Homo sapiens, GI188035877, Length=370, Percent_Identity=35.9459459459459, Blast_Score=246, Evalue=4e-65, Organism=Homo sapiens, GI21071032, Length=357, Percent_Identity=37.8151260504202, Blast_Score=246, Evalue=5e-65, Organism=Homo sapiens, GI4758138, Length=376, Percent_Identity=38.031914893617, Blast_Score=246, Evalue=6e-65, Organism=Homo sapiens, GI83700235, Length=374, Percent_Identity=38.7700534759358, Blast_Score=245, Evalue=1e-64, Organism=Homo sapiens, GI45446747, Length=375, Percent_Identity=37.0666666666667, Blast_Score=244, Evalue=2e-64, Organism=Homo sapiens, GI45446743, Length=375, Percent_Identity=37.0666666666667, Blast_Score=244, Evalue=2e-64, Organism=Homo sapiens, GI50659095, Length=393, Percent_Identity=37.6590330788804, Blast_Score=244, Evalue=2e-64, Organism=Homo sapiens, GI222352149, Length=367, Percent_Identity=37.6021798365123, Blast_Score=244, Evalue=2e-64, Organism=Homo sapiens, GI224593278, Length=379, Percent_Identity=37.467018469657, Blast_Score=242, Evalue=6e-64, Organism=Homo sapiens, GI13129006, Length=451, Percent_Identity=35.0332594235033, Blast_Score=239, Evalue=5e-63, Organism=Homo sapiens, GI13518015, Length=368, Percent_Identity=35.5978260869565, Blast_Score=237, Evalue=2e-62, Organism=Homo sapiens, GI216548263, Length=368, Percent_Identity=35.5978260869565, Blast_Score=237, Evalue=2e-62, Organism=Homo sapiens, GI262231852, Length=368, Percent_Identity=35.5978260869565, Blast_Score=237, Evalue=3e-62, Organism=Homo sapiens, GI262118318, Length=368, Percent_Identity=35.5978260869565, Blast_Score=236, Evalue=5e-62, Organism=Homo sapiens, GI31542656, Length=497, Percent_Identity=32.5955734406439, Blast_Score=235, Evalue=8e-62, Organism=Homo sapiens, GI21040371, Length=351, Percent_Identity=36.1823361823362, Blast_Score=235, Evalue=9e-62, Organism=Homo sapiens, GI148613856, Length=352, Percent_Identity=37.5, Blast_Score=234, Evalue=2e-61, Organism=Homo sapiens, GI38201710, Length=352, Percent_Identity=37.5, Blast_Score=234, Evalue=2e-61, Organism=Homo sapiens, GI4758112, Length=351, Percent_Identity=35.3276353276353, Blast_Score=233, Evalue=3e-61, Organism=Homo sapiens, GI18375623, Length=351, Percent_Identity=35.3276353276353, Blast_Score=233, Evalue=3e-61, Organism=Homo sapiens, GI41327773, Length=352, Percent_Identity=36.6477272727273, Blast_Score=229, Evalue=5e-60, Organism=Homo sapiens, GI55749865, Length=367, Percent_Identity=32.425068119891, Blast_Score=228, Evalue=2e-59, Organism=Homo sapiens, GI41327776, Length=372, Percent_Identity=35.4838709677419, Blast_Score=219, Evalue=6e-57, Organism=Homo sapiens, GI51094101, Length=346, Percent_Identity=34.1040462427746, Blast_Score=216, Evalue=4e-56, Organism=Homo sapiens, GI164419743, Length=346, Percent_Identity=34.1040462427746, Blast_Score=216, Evalue=4e-56, Organism=Homo sapiens, GI256223453, Length=371, Percent_Identity=31.5363881401617, Blast_Score=209, Evalue=5e-54, Organism=Homo sapiens, GI13514831, Length=376, Percent_Identity=33.5106382978723, Blast_Score=200, Evalue=4e-51, Organism=Homo sapiens, GI6005743, Length=388, Percent_Identity=32.9896907216495, Blast_Score=200, Evalue=4e-51, Organism=Homo sapiens, GI8922886, Length=388, Percent_Identity=32.9896907216495, Blast_Score=199, Evalue=5e-51, Organism=Homo sapiens, GI41327779, Length=377, Percent_Identity=31.5649867374005, Blast_Score=197, Evalue=3e-50, Organism=Homo sapiens, GI62241022, Length=372, Percent_Identity=33.3333333333333, Blast_Score=194, Evalue=2e-49, Organism=Homo sapiens, GI164419732, Length=373, Percent_Identity=32.7077747989276, Blast_Score=193, Evalue=4e-49, Organism=Homo sapiens, GI38569505, Length=363, Percent_Identity=31.129476584022, Blast_Score=182, Evalue=1e-45, Organism=Homo sapiens, GI62241024, Length=350, Percent_Identity=33.1428571428571, Blast_Score=182, Evalue=1e-45, Organism=Homo sapiens, GI38569503, Length=363, Percent_Identity=31.404958677686, Blast_Score=182, Evalue=1e-45, Organism=Homo sapiens, GI17505907, Length=416, Percent_Identity=29.0865384615385, Blast_Score=174, Evalue=3e-43, Organism=Homo sapiens, GI38327634, Length=381, Percent_Identity=30.9711286089239, Blast_Score=169, Evalue=9e-42, Organism=Homo sapiens, GI9506931, Length=400, Percent_Identity=30.25, Blast_Score=166, Evalue=7e-41, Organism=Homo sapiens, GI4826686, Length=352, Percent_Identity=30.1136363636364, Blast_Score=150, Evalue=5e-36, Organism=Homo sapiens, GI256773275, Length=397, Percent_Identity=30.4785894206549, Blast_Score=146, Evalue=5e-35, Organism=Homo sapiens, GI154759257, Length=423, Percent_Identity=30.7328605200946, Blast_Score=145, Evalue=1e-34, Organism=Homo sapiens, GI20336298, Length=227, Percent_Identity=34.3612334801762, Blast_Score=132, Evalue=7e-31, Organism=Homo sapiens, GI9966805, Length=345, Percent_Identity=27.8260869565217, Blast_Score=117, Evalue=3e-26, Organism=Escherichia coli, GI87082221, Length=581, Percent_Identity=50.2581755593804, Blast_Score=527, Evalue=1e-151, Organism=Escherichia coli, GI1787016, Length=373, Percent_Identity=43.9678284182306, Blast_Score=306, Evalue=2e-84, Organism=Escherichia coli, GI1787605, Length=326, Percent_Identity=43.2515337423313, Blast_Score=273, Evalue=2e-74, Organism=Escherichia coli, GI1790214, Length=350, Percent_Identity=40.8571428571429, Blast_Score=257, Evalue=1e-69, Organism=Escherichia coli, GI1788930, Length=356, Percent_Identity=39.0449438202247, Blast_Score=226, Evalue=3e-60, Organism=Escherichia coli, GI48994977, Length=391, Percent_Identity=25.8312020460358, Blast_Score=87, Evalue=2e-18, Organism=Caenorhabditis elegans, GI71987143, Length=365, Percent_Identity=39.4520547945205, Blast_Score=278, Evalue=5e-75, Organism=Caenorhabditis elegans, GI17510309, Length=385, Percent_Identity=39.4805194805195, Blast_Score=268, Evalue=7e-72, Organism=Caenorhabditis elegans, GI71995514, Length=385, Percent_Identity=39.4805194805195, Blast_Score=268, Evalue=8e-72, Organism=Caenorhabditis elegans, GI17510307, Length=385, Percent_Identity=39.4805194805195, Blast_Score=268, Evalue=9e-72, Organism=Caenorhabditis elegans, GI17555296, Length=399, Percent_Identity=38.0952380952381, Blast_Score=262, Evalue=5e-70, Organism=Caenorhabditis elegans, GI71995718, Length=377, Percent_Identity=38.7267904509284, Blast_Score=259, Evalue=4e-69, Organism=Caenorhabditis elegans, GI71995724, Length=385, Percent_Identity=37.4025974025974, Blast_Score=256, Evalue=2e-68, Organism=Caenorhabditis elegans, GI17507121, Length=376, Percent_Identity=37.5, Blast_Score=255, Evalue=6e-68, Organism=Caenorhabditis elegans, GI32565321, Length=377, Percent_Identity=39.2572944297082, Blast_Score=247, Evalue=1e-65, Organism=Caenorhabditis elegans, GI17537549, Length=380, Percent_Identity=36.5789473684211, Blast_Score=247, Evalue=2e-65, Organism=Caenorhabditis elegans, GI17510559, Length=395, Percent_Identity=34.9367088607595, Blast_Score=234, Evalue=2e-61, Organism=Caenorhabditis elegans, GI86570094, Length=352, Percent_Identity=38.6363636363636, Blast_Score=233, Evalue=2e-61, Organism=Caenorhabditis elegans, GI17552642, Length=385, Percent_Identity=36.6233766233766, Blast_Score=233, Evalue=2e-61, Organism=Caenorhabditis elegans, GI17552114, Length=362, Percent_Identity=33.9779005524862, Blast_Score=233, Evalue=3e-61, Organism=Caenorhabditis elegans, GI17507945, Length=341, Percent_Identity=38.41642228739, Blast_Score=231, Evalue=1e-60, Organism=Caenorhabditis elegans, GI71982858, Length=349, Percent_Identity=35.5300859598854, Blast_Score=229, Evalue=3e-60, Organism=Caenorhabditis elegans, GI115533224, Length=354, Percent_Identity=37.2881355932203, Blast_Score=225, Evalue=6e-59, Organism=Caenorhabditis elegans, GI17509811, Length=398, Percent_Identity=34.6733668341709, Blast_Score=217, Evalue=2e-56, Organism=Caenorhabditis elegans, GI17507877, Length=371, Percent_Identity=33.6927223719677, Blast_Score=214, Evalue=1e-55, Organism=Caenorhabditis elegans, GI17507879, Length=371, Percent_Identity=33.6927223719677, Blast_Score=214, Evalue=1e-55, Organism=Caenorhabditis elegans, GI17507881, Length=371, Percent_Identity=33.6927223719677, Blast_Score=210, Evalue=2e-54, Organism=Caenorhabditis elegans, GI115532548, Length=394, Percent_Identity=30.7106598984772, Blast_Score=206, Evalue=2e-53, Organism=Caenorhabditis elegans, GI115532546, Length=376, Percent_Identity=31.3829787234043, Blast_Score=204, Evalue=1e-52, Organism=Caenorhabditis elegans, GI193206561, Length=343, Percent_Identity=33.5276967930029, Blast_Score=203, Evalue=2e-52, Organism=Caenorhabditis elegans, GI71999644, Length=345, Percent_Identity=32.463768115942, Blast_Score=199, Evalue=3e-51, Organism=Caenorhabditis elegans, GI71999646, Length=345, Percent_Identity=32.463768115942, Blast_Score=199, Evalue=4e-51, Organism=Caenorhabditis elegans, GI17536099, Length=403, Percent_Identity=32.5062034739454, Blast_Score=197, Evalue=2e-50, Organism=Caenorhabditis elegans, GI17536101, Length=403, Percent_Identity=32.7543424317618, Blast_Score=196, Evalue=2e-50, Organism=Caenorhabditis elegans, GI17536103, Length=403, Percent_Identity=32.7543424317618, Blast_Score=195, Evalue=5e-50, Organism=Caenorhabditis elegans, GI193208216, Length=376, Percent_Identity=32.1808510638298, Blast_Score=189, Evalue=4e-48, Organism=Caenorhabditis elegans, GI17553716, Length=362, Percent_Identity=30.1104972375691, Blast_Score=178, Evalue=9e-45, Organism=Caenorhabditis elegans, GI17508543, Length=382, Percent_Identity=30.6282722513089, Blast_Score=176, Evalue=4e-44, Organism=Caenorhabditis elegans, GI17505370, Length=448, Percent_Identity=28.5714285714286, Blast_Score=170, Evalue=2e-42, Organism=Caenorhabditis elegans, GI25148203, Length=412, Percent_Identity=25.4854368932039, Blast_Score=160, Evalue=2e-39, Organism=Caenorhabditis elegans, GI17556951, Length=386, Percent_Identity=27.4611398963731, Blast_Score=152, Evalue=5e-37, Organism=Caenorhabditis elegans, GI71990816, Length=356, Percent_Identity=29.7752808988764, Blast_Score=145, Evalue=6e-35, Organism=Caenorhabditis elegans, GI17507641, Length=384, Percent_Identity=29.9479166666667, Blast_Score=144, Evalue=1e-34, Organism=Caenorhabditis elegans, GI71982862, Length=201, Percent_Identity=34.3283582089552, Blast_Score=139, Evalue=5e-33, Organism=Caenorhabditis elegans, GI25148291, Length=338, Percent_Identity=28.4023668639053, Blast_Score=136, Evalue=4e-32, Organism=Caenorhabditis elegans, GI32564046, Length=371, Percent_Identity=29.9191374663073, Blast_Score=135, Evalue=8e-32, Organism=Caenorhabditis elegans, GI71997889, Length=376, Percent_Identity=27.3936170212766, Blast_Score=120, Evalue=3e-27, Organism=Caenorhabditis elegans, GI25148205, Length=341, Percent_Identity=24.633431085044, Blast_Score=115, Evalue=8e-26, Organism=Caenorhabditis elegans, GI71987152, Length=102, Percent_Identity=44.1176470588235, Blast_Score=97, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17557982, Length=387, Percent_Identity=24.031007751938, Blast_Score=97, Evalue=4e-20, Organism=Saccharomyces cerevisiae, GI6324217, Length=373, Percent_Identity=40.7506702412869, Blast_Score=265, Evalue=2e-71, Organism=Saccharomyces cerevisiae, GI6321856, Length=365, Percent_Identity=40.2739726027397, Blast_Score=256, Evalue=7e-69, Organism=Saccharomyces cerevisiae, GI6325138, Length=387, Percent_Identity=37.4677002583979, Blast_Score=251, Evalue=2e-67, Organism=Saccharomyces cerevisiae, GI6320224, Length=368, Percent_Identity=36.1413043478261, Blast_Score=249, Evalue=1e-66, Organism=Saccharomyces cerevisiae, GI6324778, Length=379, Percent_Identity=36.9393139841689, Blast_Score=248, Evalue=3e-66, Organism=Saccharomyces cerevisiae, GI6321360, Length=380, Percent_Identity=39.4736842105263, Blast_Score=242, Evalue=1e-64, Organism=Saccharomyces cerevisiae, GI6320041, Length=355, Percent_Identity=35.2112676056338, Blast_Score=234, Evalue=3e-62, Organism=Saccharomyces cerevisiae, GI6322912, Length=369, Percent_Identity=38.2113821138211, Blast_Score=232, Evalue=1e-61, Organism=Saccharomyces cerevisiae, GI6322323, Length=369, Percent_Identity=38.2113821138211, Blast_Score=232, Evalue=1e-61, Organism=Saccharomyces cerevisiae, GI6323021, Length=374, Percent_Identity=37.4331550802139, Blast_Score=229, Evalue=1e-60, Organism=Saccharomyces cerevisiae, GI6320119, Length=352, Percent_Identity=34.9431818181818, Blast_Score=218, Evalue=3e-57, Organism=Saccharomyces cerevisiae, GI6323947, Length=420, Percent_Identity=32.3809523809524, Blast_Score=211, Evalue=3e-55, Organism=Saccharomyces cerevisiae, GI6324620, Length=380, Percent_Identity=34.4736842105263, Blast_Score=208, Evalue=2e-54, Organism=Saccharomyces cerevisiae, GI6321963, Length=401, Percent_Identity=34.4139650872818, Blast_Score=208, Evalue=2e-54, Organism=Saccharomyces cerevisiae, GI6320449, Length=368, Percent_Identity=35.8695652173913, Blast_Score=207, Evalue=3e-54, Organism=Saccharomyces cerevisiae, GI6319714, Length=445, Percent_Identity=29.8876404494382, Blast_Score=200, Evalue=7e-52, Organism=Saccharomyces cerevisiae, GI6321111, Length=352, Percent_Identity=32.6704545454545, Blast_Score=198, Evalue=3e-51, Organism=Saccharomyces cerevisiae, GI6322427, Length=366, Percent_Identity=33.0601092896175, Blast_Score=186, Evalue=7e-48, Organism=Saccharomyces cerevisiae, GI6321267, Length=374, Percent_Identity=32.3529411764706, Blast_Score=166, Evalue=1e-41, Organism=Saccharomyces cerevisiae, GI6319618, Length=434, Percent_Identity=29.4930875576037, Blast_Score=162, Evalue=2e-40, Organism=Saccharomyces cerevisiae, GI6320400, Length=419, Percent_Identity=28.6396181384248, Blast_Score=155, Evalue=2e-38, Organism=Saccharomyces cerevisiae, GI6323306, Length=418, Percent_Identity=27.2727272727273, Blast_Score=151, Evalue=3e-37, Organism=Saccharomyces cerevisiae, GI6320173, Length=219, Percent_Identity=34.703196347032, Blast_Score=144, Evalue=4e-35, Organism=Saccharomyces cerevisiae, GI6322876, Length=233, Percent_Identity=33.0472103004292, Blast_Score=109, Evalue=1e-24, Organism=Saccharomyces cerevisiae, GI6324366, Length=345, Percent_Identity=24.9275362318841, Blast_Score=106, Evalue=1e-23, Organism=Saccharomyces cerevisiae, GI6321374, Length=197, Percent_Identity=25.8883248730964, Blast_Score=68, Evalue=5e-12, Organism=Drosophila melanogaster, GI21355075, Length=354, Percent_Identity=40.1129943502825, Blast_Score=265, Evalue=7e-71, Organism=Drosophila melanogaster, GI24584399, Length=350, Percent_Identity=40, Blast_Score=263, Evalue=2e-70, Organism=Drosophila melanogaster, GI24585582, Length=358, Percent_Identity=39.3854748603352, Blast_Score=258, Evalue=7e-69, Organism=Drosophila melanogaster, GI24582080, Length=365, Percent_Identity=39.4520547945205, Blast_Score=253, Evalue=3e-67, Organism=Drosophila melanogaster, GI24582078, Length=365, Percent_Identity=39.4520547945205, Blast_Score=253, Evalue=3e-67, Organism=Drosophila melanogaster, GI17136248, Length=365, Percent_Identity=39.4520547945205, Blast_Score=253, Evalue=3e-67, Organism=Drosophila melanogaster, GI24582075, Length=365, Percent_Identity=39.4520547945205, Blast_Score=253, Evalue=3e-67, Organism=Drosophila melanogaster, GI24584994, Length=391, Percent_Identity=37.8516624040921, Blast_Score=252, Evalue=6e-67, Organism=Drosophila melanogaster, GI24645031, Length=373, Percent_Identity=36.1930294906166, Blast_Score=251, Evalue=8e-67, Organism=Drosophila melanogaster, GI24662330, Length=367, Percent_Identity=38.4196185286104, Blast_Score=251, Evalue=2e-66, Organism=Drosophila melanogaster, GI28574962, Length=353, Percent_Identity=40.2266288951841, Blast_Score=249, Evalue=3e-66, Organism=Drosophila melanogaster, GI17977678, Length=356, Percent_Identity=37.3595505617978, Blast_Score=244, Evalue=1e-64, Organism=Drosophila melanogaster, GI24642151, Length=353, Percent_Identity=37.3937677053824, Blast_Score=243, Evalue=2e-64, Organism=Drosophila melanogaster, GI17985987, Length=379, Percent_Identity=37.9947229551451, Blast_Score=242, Evalue=6e-64, Organism=Drosophila melanogaster, GI18857967, Length=359, Percent_Identity=38.4401114206128, Blast_Score=240, Evalue=2e-63, Organism=Drosophila melanogaster, GI24583281, Length=355, Percent_Identity=34.9295774647887, Blast_Score=236, Evalue=3e-62, Organism=Drosophila melanogaster, GI281361218, Length=377, Percent_Identity=35.0132625994695, Blast_Score=236, Evalue=4e-62, Organism=Drosophila melanogaster, GI24644481, Length=377, Percent_Identity=35.0132625994695, Blast_Score=236, Evalue=4e-62, Organism=Drosophila melanogaster, GI24644483, Length=377, Percent_Identity=35.0132625994695, Blast_Score=236, Evalue=4e-62, Organism=Drosophila melanogaster, GI24644479, Length=376, Percent_Identity=35.1063829787234, Blast_Score=236, Evalue=4e-62, Organism=Drosophila melanogaster, GI24583279, Length=355, Percent_Identity=34.9295774647887, Blast_Score=236, Evalue=5e-62, Organism=Drosophila melanogaster, GI24644487, Length=377, Percent_Identity=35.0132625994695, Blast_Score=235, Evalue=6e-62, Organism=Drosophila melanogaster, GI45551833, Length=377, Percent_Identity=35.0132625994695, Blast_Score=235, Evalue=6e-62, Organism=Drosophila melanogaster, GI24644485, Length=377, Percent_Identity=35.0132625994695, Blast_Score=235, Evalue=6e-62, Organism=Drosophila melanogaster, GI24581954, Length=353, Percent_Identity=36.2606232294618, Blast_Score=224, Evalue=1e-58, Organism=Drosophila melanogaster, GI24581952, Length=353, Percent_Identity=36.2606232294618, Blast_Score=224, Evalue=1e-58, Organism=Drosophila melanogaster, GI24581956, Length=353, Percent_Identity=36.2606232294618, Blast_Score=224, Evalue=1e-58, Organism=Drosophila melanogaster, GI21356161, Length=378, Percent_Identity=34.1269841269841, Blast_Score=224, Evalue=1e-58, Organism=Drosophila melanogaster, GI17136814, Length=389, Percent_Identity=35.4755784061697, Blast_Score=211, Evalue=2e-54, Organism=Drosophila melanogaster, GI28575014, Length=367, Percent_Identity=32.6975476839237, Blast_Score=204, Evalue=2e-52, Organism=Drosophila melanogaster, GI281365720, Length=312, Percent_Identity=38.4615384615385, Blast_Score=201, Evalue=2e-51, Organism=Drosophila melanogaster, GI28571808, Length=471, Percent_Identity=28.4501061571125, Blast_Score=190, Evalue=3e-48, Organism=Drosophila melanogaster, GI28571809, Length=471, Percent_Identity=28.4501061571125, Blast_Score=190, Evalue=3e-48, Organism=Drosophila melanogaster, GI17647335, Length=352, Percent_Identity=31.8181818181818, Blast_Score=183, Evalue=3e-46, Organism=Drosophila melanogaster, GI24643725, Length=400, Percent_Identity=29.25, Blast_Score=172, Evalue=9e-43, Organism=Drosophila melanogaster, GI21355559, Length=359, Percent_Identity=33.7047353760446, Blast_Score=170, Evalue=3e-42, Organism=Drosophila melanogaster, GI24666101, Length=349, Percent_Identity=33.2378223495702, Blast_Score=164, Evalue=1e-40, Organism=Drosophila melanogaster, GI24642822, Length=378, Percent_Identity=29.8941798941799, Blast_Score=159, Evalue=4e-39, Organism=Drosophila melanogaster, GI20130173, Length=432, Percent_Identity=27.3148148148148, Blast_Score=157, Evalue=3e-38, Organism=Drosophila melanogaster, GI19920478, Length=367, Percent_Identity=28.6103542234332, Blast_Score=144, Evalue=1e-34, Organism=Drosophila melanogaster, GI24668515, Length=333, Percent_Identity=30.03003003003, Blast_Score=139, Evalue=6e-33, Organism=Drosophila melanogaster, GI18859659, Length=259, Percent_Identity=32.046332046332, Blast_Score=120, Evalue=3e-27, Organism=Drosophila melanogaster, GI28571338, Length=259, Percent_Identity=32.046332046332, Blast_Score=120, Evalue=3e-27, Organism=Drosophila melanogaster, GI24640164, Length=364, Percent_Identity=26.0989010989011, Blast_Score=118, Evalue=1e-26, Organism=Drosophila melanogaster, GI17136666, Length=437, Percent_Identity=26.0869565217391, Blast_Score=110, Evalue=3e-24, Organism=Drosophila melanogaster, GI24646066, Length=423, Percent_Identity=26.0047281323877, Blast_Score=94, Evalue=4e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005580 - InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF03880 DbpA; PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 69277; Mature: 69146
Theoretical pI: Translated: 9.70; Mature: 9.70
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQESSAPLLFADLGLSGAVMRAVANVGYESPSPIQAATIPALLAGRDVLGQAQTGTGKT CCCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHCCCCCCCCCC AAFALPVLSNADLNQVKPQALVLAPTRELAIQVAEAFQKYAEAIPGFRVLPVYGGQPYAQ CEEEEHHCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHH QLSALKRGVHVVVGTPGRVIDHLDRGTLDLSQLKTLVLDEADEMLRMGFIDDVEAVLKKL HHHHHHCCCEEEECCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHC PEKRQVALFSATMPPAIRRIAQTYLKDPAEVIIAAKTTTSANIRQRYWWVSGLHKLDALT CCHHEEEEEECCCCHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHH RILEVEPFDGMIIFARTKAGTEELAQKLQARGLAAAAINGDMQQAAREKTIAQLKDGKLD HHHHCCCCCCEEEEEECCCCHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHCCCCEE ILVATDVAARGLDVERISHVLNYDIPYDTESYVHRIGRTGRAGRTGDAILFVTLREKGML EEEECCHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCEEEEEEECCCHHH RSIERATRQPIEEMQLPSVDAVNDTRVARFMTRITETLAGGQIDMYRDLLQRYEAENNVP HHHHHHHHCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCC AIDIAAAMAKLLQGDAPFLLTPPVRGAREDAAPRERHQRADRGDRPRFEPKFERGPRADG HHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCC ERAPRPPRGDDAGGERPRRDPVAPRGEPELGMESYRIEVGHSHGVKPANIVGAIANEAGL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCC ESRYIGRIDIQDDYSILDLPADMPRELLTHLKKVWVSGQQLNMRKLEEGEAAASPAKPRF CCCCEEEEECCCCCCEEECCCCCHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCC PRGGKPSGRSNGPVRPMDRAGAPHRKGPPKPRGE CCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCC >Mature Secondary Structure TQESSAPLLFADLGLSGAVMRAVANVGYESPSPIQAATIPALLAGRDVLGQAQTGTGKT CCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHCCCCCCCCCC AAFALPVLSNADLNQVKPQALVLAPTRELAIQVAEAFQKYAEAIPGFRVLPVYGGQPYAQ CEEEEHHCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHH QLSALKRGVHVVVGTPGRVIDHLDRGTLDLSQLKTLVLDEADEMLRMGFIDDVEAVLKKL HHHHHHCCCEEEECCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHC PEKRQVALFSATMPPAIRRIAQTYLKDPAEVIIAAKTTTSANIRQRYWWVSGLHKLDALT CCHHEEEEEECCCCHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHH RILEVEPFDGMIIFARTKAGTEELAQKLQARGLAAAAINGDMQQAAREKTIAQLKDGKLD HHHHCCCCCCEEEEEECCCCHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHCCCCEE ILVATDVAARGLDVERISHVLNYDIPYDTESYVHRIGRTGRAGRTGDAILFVTLREKGML EEEECCHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCEEEEEEECCCHHH RSIERATRQPIEEMQLPSVDAVNDTRVARFMTRITETLAGGQIDMYRDLLQRYEAENNVP HHHHHHHHCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCC AIDIAAAMAKLLQGDAPFLLTPPVRGAREDAAPRERHQRADRGDRPRFEPKFERGPRADG HHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCC ERAPRPPRGDDAGGERPRRDPVAPRGEPELGMESYRIEVGHSHGVKPANIVGAIANEAGL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCC ESRYIGRIDIQDDYSILDLPADMPRELLTHLKKVWVSGQQLNMRKLEEGEAAASPAKPRF CCCCEEEEECCCCCCEEECCCCCHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCC PRGGKPSGRSNGPVRPMDRAGAPHRKGPPKPRGE CCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]