Definition Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome.
Accession NC_007705
Length 4,940,217

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The map label for this gene is 84623091

Identifier: 84623091

GI number: 84623091

Start: 1560512

End: 1560913

Strand: Direct

Name: 84623091

Synonym: XOO_1434

Alternate gene names: NA

Gene position: 1560512-1560913 (Clockwise)

Preceding gene: 84623090

Following gene: 84623095

Centisome position: 31.59

GC content: 64.43

Gene sequence:

>402_bases
ATGCAACTGACGATCGAACTGCAGATGCTGGGCTGGGCGATGGTGCTGGGGTTGGTGCAATTGCTGGCTGCCTCGGCCAG
CATGACCGCCCAGCGCGGCGCCAAGTGGAATGCCAGCGCACGCGATGGCGCGGCCAAGCCGCTTACCGGCGTGGCCGCGC
GGTTGGACCGTGCGTTCGGCAACTATCTTGAAACCTTTCCGATCTTCGCTGCTGCCGTGCTGGCAGTGAACGTCGCGGGG
CGCAGCAGTGCAGAAACAGCACTCGCCGTGCAGCTCTACCTATGGGCGCGCGTGGCCTATGTGCCGGTGTATGCCGCGGG
GATTCCGTACCTGCGTAGCGCCATCTGGGTGGTGTCGTTCTGGGGCATCGTCAAACTGGTGCGCGCACTGCTGGGCATTT
GA

Upstream 100 bases:

>100_bases
TTGGTGTCGTTCCGTCTGGACGAAGACAAGACCTGGCGGTTGGCCGGTTACAGCCTGCGCCCGGCGGTGAAGTGATGGTT
CCATCGGCCGGGAGAAACGT

Downstream 100 bases:

>100_bases
TGCAGCAGTGCCGCCAGGCATGAGGCTCGACCCGACGCTTGCACCCGCGCCAGGATTGCATCGATTGCCGCCTGCGTCTT
GTCGGTAAGCAGGCCCTCTT

Product: inner membrane protein

Products: NA

Alternate protein names: Transmembrane Protein

Number of amino acids: Translated: 133; Mature: 133

Protein sequence:

>133_residues
MQLTIELQMLGWAMVLGLVQLLAASASMTAQRGAKWNASARDGAAKPLTGVAARLDRAFGNYLETFPIFAAAVLAVNVAG
RSSAETALAVQLYLWARVAYVPVYAAGIPYLRSAIWVVSFWGIVKLVRALLGI

Sequences:

>Translated_133_residues
MQLTIELQMLGWAMVLGLVQLLAASASMTAQRGAKWNASARDGAAKPLTGVAARLDRAFGNYLETFPIFAAAVLAVNVAG
RSSAETALAVQLYLWARVAYVPVYAAGIPYLRSAIWVVSFWGIVKLVRALLGI
>Mature_133_residues
MQLTIELQMLGWAMVLGLVQLLAASASMTAQRGAKWNASARDGAAKPLTGVAARLDRAFGNYLETFPIFAAAVLAVNVAG
RSSAETALAVQLYLWARVAYVPVYAAGIPYLRSAIWVVSFWGIVKLVRALLGI

Specific function: Unknown

COG id: COG3686

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14210; Mature: 14210

Theoretical pI: Translated: 10.59; Mature: 10.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLTIELQMLGWAMVLGLVQLLAASASMTAQRGAKWNASARDGAAKPLTGVAARLDRAFG
CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
NYLETFPIFAAAVLAVNVAGRSSAETALAVQLYLWARVAYVPVYAAGIPYLRSAIWVVSF
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WGIVKLVRALLGI
HHHHHHHHHHHCC
>Mature Secondary Structure
MQLTIELQMLGWAMVLGLVQLLAASASMTAQRGAKWNASARDGAAKPLTGVAARLDRAFG
CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
NYLETFPIFAAAVLAVNVAGRSSAETALAVQLYLWARVAYVPVYAAGIPYLRSAIWVVSF
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WGIVKLVRALLGI
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA