| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84621920
Identifier: 84621920
GI number: 84621920
Start: 289095
End: 289697
Strand: Direct
Name: 84621920
Synonym: XOO_0263
Alternate gene names: NA
Gene position: 289095-289697 (Clockwise)
Preceding gene: 84621919
Following gene: 84621921
Centisome position: 5.85
GC content: 70.81
Gene sequence:
>603_bases ATGTCTTCCGATGCACTGGCAGTTCCCCCATCGGCCGCGCTCGCGCTGCGCCACGCCACTCAGGAGGCCCATCGCTTGGT CGAAGCAGTCCCGCTCATGCAGGCGCTGGGACGGGGGCAGGTCGATTCGGCGGCCTATGCGCAGATCCTGCGTCGCCACC ATGCCTTGCTGGCTGGCTTCGAAGCGCAACTCAGCGACTGGCTCACCACCGTGGTCGGCAACGGCTGGCACTACCGCCGC CGCGTACCGGCACTGCGCGAGGACTTGCGCGCGCTCGGCCAGCAACCGGACCCGCCGGTGGCATTGCCCAGCGCGGCCGC CGGCGCCGACGATGCCGCGCGCTGGGGCATGGTGTATGTCATCGAAGGCTCCCAGCTGGGCGGGCGGATGATCGCGCGCA CCTTGCGCAGGCAGCAGCCCGCGCTGGCCGGCGCCCTGCGCTATTTCGAGCTGGCCGACGATGATCCGGCCGGCTGGCGC CGCTTCCAGGCAGCGCTGGATCGACGCCTCGACACCGCATCCGCGCGCGCCGCCGCCATCGATGGCGCGCAGACCATGTT TGCCCACTTCCATACCTGCCTCGCAGCGGAGCCGCACCTGTGA
Upstream 100 bases:
>100_bases AGACAACCTATTCAGCTTGCGCTCGCGTCCGCTTTTTCTGATTTGCGCAAGCGCTGCTAGGCTGGTGTCCTTCGTGCCGC GGCACTGCCTTGAGCTCTTA
Downstream 100 bases:
>100_bases ATCAGCCTACCGAACCCCTGGATATGGATGTCTGCGCACGGGAGCCGATCCACATTCCCGGCCTGATCCAGCCCTACGGC GTGTTGCTCGTAATCGAACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 200; Mature: 199
Protein sequence:
>200_residues MSSDALAVPPSAALALRHATQEAHRLVEAVPLMQALGRGQVDSAAYAQILRRHHALLAGFEAQLSDWLTTVVGNGWHYRR RVPALREDLRALGQQPDPPVALPSAAAGADDAARWGMVYVIEGSQLGGRMIARTLRRQQPALAGALRYFELADDDPAGWR RFQAALDRRLDTASARAAAIDGAQTMFAHFHTCLAAEPHL
Sequences:
>Translated_200_residues MSSDALAVPPSAALALRHATQEAHRLVEAVPLMQALGRGQVDSAAYAQILRRHHALLAGFEAQLSDWLTTVVGNGWHYRR RVPALREDLRALGQQPDPPVALPSAAAGADDAARWGMVYVIEGSQLGGRMIARTLRRQQPALAGALRYFELADDDPAGWR RFQAALDRRLDTASARAAAIDGAQTMFAHFHTCLAAEPHL >Mature_199_residues SSDALAVPPSAALALRHATQEAHRLVEAVPLMQALGRGQVDSAAYAQILRRHHALLAGFEAQLSDWLTTVVGNGWHYRRR VPALREDLRALGQQPDPPVALPSAAAGADDAARWGMVYVIEGSQLGGRMIARTLRRQQPALAGALRYFELADDDPAGWRR FQAALDRRLDTASARAAAIDGAQTMFAHFHTCLAAEPHL
Specific function: Unknown
COG id: COG3230
COG function: function code P; Heme oxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21685; Mature: 21554
Theoretical pI: Translated: 8.52; Mature: 8.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSDALAVPPSAALALRHATQEAHRLVEAVPLMQALGRGQVDSAAYAQILRRHHALLAGF CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH EAQLSDWLTTVVGNGWHYRRRVPALREDLRALGQQPDPPVALPSAAAGADDAARWGMVYV HHHHHHHHHHHHCCCHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCEEEE IEGSQLGGRMIARTLRRQQPALAGALRYFELADDDPAGWRRFQAALDRRLDTASARAAAI EECCCCCHHHHHHHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH DGAQTMFAHFHTCLAAEPHL HHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SSDALAVPPSAALALRHATQEAHRLVEAVPLMQALGRGQVDSAAYAQILRRHHALLAGF CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH EAQLSDWLTTVVGNGWHYRRRVPALREDLRALGQQPDPPVALPSAAAGADDAARWGMVYV HHHHHHHHHHHHCCCHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCEEEE IEGSQLGGRMIARTLRRQQPALAGALRYFELADDDPAGWRRFQAALDRRLDTASARAAAI EECCCCCHHHHHHHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH DGAQTMFAHFHTCLAAEPHL HHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA