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The map label for this gene is yesY [H]

Identifier: 84621898

GI number: 84621898

Start: 265680

End: 266165

Strand: Direct

Name: yesY [H]

Synonym: XOO_0241

Alternate gene names: 84621898

Gene position: 265680-266165 (Clockwise)

Preceding gene: 84621897

Following gene: 84621901

Centisome position: 5.38

GC content: 65.23

Gene sequence:

>486_bases
ATGCATCGACTGCTCATCGCCATGCTGTTGCGATGTACCGGCATCGCCCACGCCGCGCCCCAACGGATCTTCATCGCCGG
CGATTCCACCGCTGCCGAATACGCTGCCGAGCGCGCCCCGCAAGCCGGTTGGGGCCAACTGCTGCAGGACTGGTTCGACT
CGGCGCAGTTGCAGGTGCACAACCACGCCAAGGGCGGGCTCAGCACGCGCAGTTTCATCGCCGAAGGGCGCCGGGATGCC
ATCGCAAAACAACTGCAACGCGGCGATGTATTGCGGATCCAGTTCGGCCACCAGGACGCCAAACGCGAAGCCCCCACGCG
CTGTACCGATCCCACGACCGATGACCTGCAGCTCCTGCGCCGCTACATCGCCGCTGCGCGCGACAAGGGTGCCACGCCCA
TCCTGATCACTCCGGCTGCACGGCTGTTGTACGATTTCGGCGCGTTGCTCGACACCCACGGTCGCTACACCCTGGCCATG
CAGTAA

Upstream 100 bases:

>100_bases
CGCCCAAGACCGCGCATCACGCATGCGCTCCATGCGTCAGCGTCGTATCGCAAACCGCAACAACACCAGGCAATAGCACG
CTCACTCAGCGGAGCCCCTC

Downstream 100 bases:

>100_bases
CTCGCCGCGCAGGAACACGTTGGCCTGATCGATCTCAACGCCGGCTCCAGCGCCTGGATCCGCGCGCTCGGCGAACAGGC
GGCCAAACCGTATTTCCTGT

Product: hypothetical protein

Products: NA

Alternate protein names: RGAE [H]

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MHRLLIAMLLRCTGIAHAAPQRIFIAGDSTAAEYAAERAPQAGWGQLLQDWFDSAQLQVHNHAKGGLSTRSFIAEGRRDA
IAKQLQRGDVLRIQFGHQDAKREAPTRCTDPTTDDLQLLRRYIAAARDKGATPILITPAARLLYDFGALLDTHGRYTLAM
Q

Sequences:

>Translated_161_residues
MHRLLIAMLLRCTGIAHAAPQRIFIAGDSTAAEYAAERAPQAGWGQLLQDWFDSAQLQVHNHAKGGLSTRSFIAEGRRDA
IAKQLQRGDVLRIQFGHQDAKREAPTRCTDPTTDDLQLLRRYIAAARDKGATPILITPAARLLYDFGALLDTHGRYTLAM
Q
>Mature_161_residues
MHRLLIAMLLRCTGIAHAAPQRIFIAGDSTAAEYAAERAPQAGWGQLLQDWFDSAQLQVHNHAKGGLSTRSFIAEGRRDA
IAKQLQRGDVLRIQFGHQDAKREAPTRCTDPTTDDLQLLRRYIAAARDKGATPILITPAARLLYDFGALLDTHGRYTLAM
Q

Specific function: May play role in the degradation of rhamnogalacturonan derived from plant cell walls. Probably has broad substrate specificity and may degrade several types of acetylated substrates [H]

COG id: COG2755

COG function: function code E; Lysophospholipase L1 and related esterases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'GDSL' lipolytic enzyme family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013830
- InterPro:   IPR013831
- InterPro:   IPR001087 [H]

Pfam domain/function: PF00657 Lipase_GDSL [H]

EC number: NA

Molecular weight: Translated: 17819; Mature: 17819

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHRLLIAMLLRCTGIAHAAPQRIFIAGDSTAAEYAAERAPQAGWGQLLQDWFDSAQLQVH
CHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHCCCCCHHHHHHHHHCCCEEEEE
NHAKGGLSTRSFIAEGRRDAIAKQLQRGDVLRIQFGHQDAKREAPTRCTDPTTDDLQLLR
CCCCCCCHHHHHHHCCHHHHHHHHHHCCCEEEEEECCCHHHHCCCCCCCCCCHHHHHHHH
RYIAAARDKGATPILITPAARLLYDFGALLDTHGRYTLAMQ
HHHHHHHCCCCCCEEECHHHHHHHHHHHHHHCCCCEEEEEC
>Mature Secondary Structure
MHRLLIAMLLRCTGIAHAAPQRIFIAGDSTAAEYAAERAPQAGWGQLLQDWFDSAQLQVH
CHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHCCCCCHHHHHHHHHCCCEEEEE
NHAKGGLSTRSFIAEGRRDAIAKQLQRGDVLRIQFGHQDAKREAPTRCTDPTTDDLQLLR
CCCCCCCHHHHHHHCCHHHHHHHHHHCCCEEEEEECCCHHHHCCCCCCCCCCHHHHHHHH
RYIAAARDKGATPILITPAARLLYDFGALLDTHGRYTLAMQ
HHHHHHHCCCCCCEEECHHHHHHHHHHHHHHCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]