| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84621662
Identifier: 84621662
GI number: 84621662
Start: 7731
End: 8567
Strand: Direct
Name: 84621662
Synonym: XOO_0005
Alternate gene names: NA
Gene position: 7731-8567 (Clockwise)
Preceding gene: 84621661
Following gene: 84621663
Centisome position: 0.16
GC content: 65.71
Gene sequence:
>837_bases ATGAGCACAGATCTTCCACCGCCCCCGGCACCGCGCTCGGTTGCCGGCAAGCCGCCGCTGCTGCCCGTGCTCGTGGGGTT TTGGGTCGATGTGCTGATCGCCGCCGGCCTGTTGCTGAGCTTGAGTGTGGCCGGCTTTGCGCTGTGGGGCGCGGTGCGTG GCTTCAGTCATGTGCAGGCGGCCAAGGCGCAAGGCCTGACGCCCTCGCCTTCCGAAGTCATGGCCGCCATCGGCCAACCC GGTGTGCTGGTGCAGCTGGTCACCGCGCTGGTCAGCACAGCCACGCCGGCGTTGCTGTTGTACTACTGGCGTCGTCGCGT CACTGCTGCAGAACAAACCGCCTCGCGGGCTGCCGCGCGCCGCGCCTCCACTTGGGGCTGGACTGCGCTGATCGCCGCTG CCGTGTTTTTGCTTAGCAATCTGGTTAGCGTGACGGCTACGGCGCTGGGTATCAAACCGGTGCCGACCAACCTGCCGTTA ATGGAAGAAGCGCTCCACCAATGGCCGCTGGCATTGACGCTGTTTGCCGTGGTGATCGCGCCGGCCTACGAGGAGCTGCT GTTCCGCCGCGTGCTGTTTGGGCGCCTGCTCAGTGCCGGCCGTCCATGGCTGGGTGTCGTGCTGAGTGGGGCAATTTTCG CCCTGGTGCATGAAGTGCCCGGTATCAGCGGAAACGGCCCTGCTGCCATCGCCCAGCTGTGGCTGGTGTACGGCAGCATG GGCGCGGCGTTCGCGTGGCTGTATTGGCGCACCGGCACCTTGTGGGCATCGATTGCTGCGCATGGCATCAATAACGCCAC CGCGCTGGCGGCGTTGTACTTTTCCGGGCTTGGTTGA
Upstream 100 bases:
>100_bases AACGCGCTGAAGGTGTCCAACCTGGATATTTGAGCCACCAGTCCCGACCAGCACATCGCTATCGCGGCGTGCTGGTCGGT GCGGTGTTCGCAGGACGACG
Downstream 100 bases:
>100_bases GCCGACTAGCGGCTACCTGCGACTGTCCTGCCGCAGTGGCGCCGCGGTACCTGACCACAGAATTGACCCGCACGCTCGGC GTCCCAATCCCTACCGAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protease; CAAX Amino Terminal Protease Family Protein
Number of amino acids: Translated: 278; Mature: 277
Protein sequence:
>278_residues MSTDLPPPPAPRSVAGKPPLLPVLVGFWVDVLIAAGLLLSLSVAGFALWGAVRGFSHVQAAKAQGLTPSPSEVMAAIGQP GVLVQLVTALVSTATPALLLYYWRRRVTAAEQTASRAAARRASTWGWTALIAAAVFLLSNLVSVTATALGIKPVPTNLPL MEEALHQWPLALTLFAVVIAPAYEELLFRRVLFGRLLSAGRPWLGVVLSGAIFALVHEVPGISGNGPAAIAQLWLVYGSM GAAFAWLYWRTGTLWASIAAHGINNATALAALYFSGLG
Sequences:
>Translated_278_residues MSTDLPPPPAPRSVAGKPPLLPVLVGFWVDVLIAAGLLLSLSVAGFALWGAVRGFSHVQAAKAQGLTPSPSEVMAAIGQP GVLVQLVTALVSTATPALLLYYWRRRVTAAEQTASRAAARRASTWGWTALIAAAVFLLSNLVSVTATALGIKPVPTNLPL MEEALHQWPLALTLFAVVIAPAYEELLFRRVLFGRLLSAGRPWLGVVLSGAIFALVHEVPGISGNGPAAIAQLWLVYGSM GAAFAWLYWRTGTLWASIAAHGINNATALAALYFSGLG >Mature_277_residues STDLPPPPAPRSVAGKPPLLPVLVGFWVDVLIAAGLLLSLSVAGFALWGAVRGFSHVQAAKAQGLTPSPSEVMAAIGQPG VLVQLVTALVSTATPALLLYYWRRRVTAAEQTASRAAARRASTWGWTALIAAAVFLLSNLVSVTATALGIKPVPTNLPLM EEALHQWPLALTLFAVVIAPAYEELLFRRVLFGRLLSAGRPWLGVVLSGAIFALVHEVPGISGNGPAAIAQLWLVYGSMG AAFAWLYWRTGTLWASIAAHGINNATALAALYFSGLG
Specific function: Unknown
COG id: COG1266
COG function: function code R; Predicted metal-dependent membrane protease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29162; Mature: 29030
Theoretical pI: Translated: 10.63; Mature: 10.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTDLPPPPAPRSVAGKPPLLPVLVGFWVDVLIAAGLLLSLSVAGFALWGAVRGFSHVQA CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AKAQGLTPSPSEVMAAIGQPGVLVQLVTALVSTATPALLLYYWRRRVTAAEQTASRAAAR HHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH RASTWGWTALIAAAVFLLSNLVSVTATALGIKPVPTNLPLMEEALHQWPLALTLFAVVIA HCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHH PAYEELLFRRVLFGRLLSAGRPWLGVVLSGAIFALVHEVPGISGNGPAAIAQLWLVYGSM HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH GAAFAWLYWRTGTLWASIAAHGINNATALAALYFSGLG HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC >Mature Secondary Structure STDLPPPPAPRSVAGKPPLLPVLVGFWVDVLIAAGLLLSLSVAGFALWGAVRGFSHVQA CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AKAQGLTPSPSEVMAAIGQPGVLVQLVTALVSTATPALLLYYWRRRVTAAEQTASRAAAR HHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH RASTWGWTALIAAAVFLLSNLVSVTATALGIKPVPTNLPLMEEALHQWPLALTLFAVVIA HCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHH PAYEELLFRRVLFGRLLSAGRPWLGVVLSGAIFALVHEVPGISGNGPAAIAQLWLVYGSM HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH GAAFAWLYWRTGTLWASIAAHGINNATALAALYFSGLG HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA