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The map label for this gene is 84490188

Identifier: 84490188

GI number: 84490188

Start: 1581014

End: 1581496

Strand: Direct

Name: 84490188

Synonym: Msp_1406

Alternate gene names: NA

Gene position: 1581014-1581496 (Clockwise)

Preceding gene: 84490187

Following gene: 84490189

Centisome position: 89.45

GC content: 32.92

Gene sequence:

>483_bases
ATGGGATGGGATGATGCACCAGCTCATGTATGTAGAGGAGGAGATATAAGAGGATTGGCATTTTGTTGTCCTCCAGTTAA
ACCTTGTCCTGTACATACTAAACTAGCAGAGGTAGGTTTAAGTCCTCAGGAATTTGTGAATATTAAGGAAGAATTTGGTA
AAAAAACAGAGTTAGGTAAAGGTACTGGAACATGTTTTGGATCTTTAATCTGGTGTTGTAAAGCTTCAAAACCATGTCCA
CTAAGGGATTCTGTACTTCAATCAATAGGTATGTCACATGATACCTATATGACATTAAAAAAGGAATTGGCCAACGAGAT
TGTTAAACATTCAAATGTTAATGAAATAACATATTCTGATAAAGACATAAGTACTCTTGCTGAAACATTTAATATTACCA
TTGATGAAGCAAGAAATGCTTTAACTGAAGCTGGTAATGATTTAAAAACAGCAATTAAAAATCTTAGATTAAAAAGTTTA
TAA

Upstream 100 bases:

>100_bases
ATGAAAACCATAAGTATTATTAATATAAAATAATTATACTAAGAAAATATCTTTTTAAATAATAATTAAATGTAATAATT
AAAAGTAAGGAGTGATTATA

Downstream 100 bases:

>100_bases
TTCTATAAACTTTCTATTTATTACTATTTTTTTATGAATCCTTGAAGGTATTGTATTATGACAGTTACATCATTGTTTTT
AGATATGGAAGAGAAAAATG

Product: metal-binding transcription factor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 159

Protein sequence:

>160_residues
MGWDDAPAHVCRGGDIRGLAFCCPPVKPCPVHTKLAEVGLSPQEFVNIKEEFGKKTELGKGTGTCFGSLIWCCKASKPCP
LRDSVLQSIGMSHDTYMTLKKELANEIVKHSNVNEITYSDKDISTLAETFNITIDEARNALTEAGNDLKTAIKNLRLKSL

Sequences:

>Translated_160_residues
MGWDDAPAHVCRGGDIRGLAFCCPPVKPCPVHTKLAEVGLSPQEFVNIKEEFGKKTELGKGTGTCFGSLIWCCKASKPCP
LRDSVLQSIGMSHDTYMTLKKELANEIVKHSNVNEITYSDKDISTLAETFNITIDEARNALTEAGNDLKTAIKNLRLKSL
>Mature_159_residues
GWDDAPAHVCRGGDIRGLAFCCPPVKPCPVHTKLAEVGLSPQEFVNIKEEFGKKTELGKGTGTCFGSLIWCCKASKPCPL
RDSVLQSIGMSHDTYMTLKKELANEIVKHSNVNEITYSDKDISTLAETFNITIDEARNALTEAGNDLKTAIKNLRLKSL

Specific function: Unknown

COG id: COG4008

COG function: function code K; Predicted metal-binding transcription factor

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017671 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17498; Mature: 17367

Theoretical pI: Translated: 7.31; Mature: 7.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
5.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGWDDAPAHVCRGGDIRGLAFCCPPVKPCPVHTKLAEVGLSPQEFVNIKEEFGKKTELGK
CCCCCCCHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHCCCHHHHHHHHHHCCCCCCCCC
GTGTCFGSLIWCCKASKPCPLRDSVLQSIGMSHDTYMTLKKELANEIVKHSNVNEITYSD
CHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEECC
KDISTLAETFNITIDEARNALTEAGNDLKTAIKNLRLKSL
HHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
GWDDAPAHVCRGGDIRGLAFCCPPVKPCPVHTKLAEVGLSPQEFVNIKEEFGKKTELGK
CCCCCCHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHCCCHHHHHHHHHHCCCCCCCCC
GTGTCFGSLIWCCKASKPCPLRDSVLQSIGMSHDTYMTLKKELANEIVKHSNVNEITYSD
CHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEECC
KDISTLAETFNITIDEARNALTEAGNDLKTAIKNLRLKSL
HHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]