Definition Methanosphaera stadtmanae DSM 3091 chromosome, complete genome.
Accession NC_007681
Length 1,767,403

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The map label for this gene is 84490119

Identifier: 84490119

GI number: 84490119

Start: 1498661

End: 1500007

Strand: Direct

Name: 84490119

Synonym: Msp_1331

Alternate gene names: NA

Gene position: 1498661-1500007 (Clockwise)

Preceding gene: 84490118

Following gene: 84490120

Centisome position: 84.79

GC content: 26.58

Gene sequence:

>1347_bases
ATGAAAAACATATTAATTAGTGATGCTAATCATGGTGGACTTACACTTCTTGAAGAATATTCAAAATACACCAAGAATAA
TTTATTTTTCTATGATACATACAACAAACTTAATTTAGATATGAAAGAATTTTATAAAAAAAAATATAATGTTGAGTTTC
TTTCATTAGATGATATTAGGAAAAATGAGGATAAATATATTACAATTAGTCCCATACATATGAAACCATTATTTAGGTGT
GATTATACTCATCATGAATTTACAGGATATTTAATTAAAAAACATGAAGAATGTTATGGATGGAATTTTAAGATTATAGA
AATTACTGGTGTTAAGGGAAAAACTACAACTGCAAACTTAATAATGGAAGTTTTAAAAAATAAAAATCTTCTTGTTTTAA
CAAGCCATAATCTTCTATATAAAAGTTGTGAAAGGGAGATTGTTTTGGATAAAACACTGAGTATCACACCAGCCAGTATA
ATTCATGCCCTTAATAGAGCAAAAGATATGAATTTACTCAGTAGTATTGATTACTGTATTTTTGAAGTATCTCTTGGTAT
AACAACAAATACAGACATTGGTATTCTAACAAATATATTAGAGGATTATCCAATTGCAGATAATAGCCAAAGTGCATCTA
GTGCAAAAAAATCAGTTTTTAAATCAAAAAAGGTTATTTGTGATAGAACTACCCTTAAGAAGTACTACCCACACATGGAC
AAAAATATTATAACTGTTAGTTTAGATGATAAAACTGCAGACATCTATACAACAGAGATTGATTATAATATTAAGAGTAC
TTCAATTAGAATAAAATACTGTGACTATGAATTTAGAGTGAATTGTTTTGCCCTATGTGATTTTTATATAAATAACATAC
TATATGCTGTGTGTGTTGGTTTGTTGTTGGATATTCCAATAAAAACAATTACCTCAAATATAAAGGATACTCTACCAATA
GAAGGTAGAGGATCAATTAAATATATTGAAGATAAAATAGTTCTTGAAGATATTAATCCAGGACTTAACACCACATCCAT
ATCAAAATGTATTTCAAATCTAGAGAGATATTCAAATAATTATGTGTTGATTGTTGGTGGAGATTATGGTATAACTTGTG
AGGAAATAGATGAAGAGAAGTTATCTAAATACATATCCACCATAGATTCACCTATTGTTTTAACAGGAGATGTTGGATAT
AATCTATTAAAAAAATTAGATAAAGACTATGAATTCTATCATGAACTCACTGATGCTTTTAATTATTTACTTAAAAAGGA
TTATGATGTTATTCAAATAATTTACAGAAGTGAGTATGCTAGAAATATTACATATCTTCCAAATTAA

Upstream 100 bases:

>100_bases
ATTCAGCATATTTTGTTAGATTTAAAAAGAATTTCTATAATAGTGTAAATAATAAATTAATTGTAGGTTAACTACAATTT
TCTCTTTTTTAGGTGTTGAT

Downstream 100 bases:

>100_bases
ATATAAATTGAAACTAATTAAAATTATTTGTAAGAGTATAAAAAGAAGAAGTAACTTATTGAGTAATATATTTATTTAAA
TCAAAGACATGGTAAAAATA

Product: UDP-N-acetylmuramyl pentapeptide synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 448; Mature: 448

Protein sequence:

>448_residues
MKNILISDANHGGLTLLEEYSKYTKNNLFFYDTYNKLNLDMKEFYKKKYNVEFLSLDDIRKNEDKYITISPIHMKPLFRC
DYTHHEFTGYLIKKHEECYGWNFKIIEITGVKGKTTTANLIMEVLKNKNLLVLTSHNLLYKSCEREIVLDKTLSITPASI
IHALNRAKDMNLLSSIDYCIFEVSLGITTNTDIGILTNILEDYPIADNSQSASSAKKSVFKSKKVICDRTTLKKYYPHMD
KNIITVSLDDKTADIYTTEIDYNIKSTSIRIKYCDYEFRVNCFALCDFYINNILYAVCVGLLLDIPIKTITSNIKDTLPI
EGRGSIKYIEDKIVLEDINPGLNTTSISKCISNLERYSNNYVLIVGGDYGITCEEIDEEKLSKYISTIDSPIVLTGDVGY
NLLKKLDKDYEFYHELTDAFNYLLKKDYDVIQIIYRSEYARNITYLPN

Sequences:

>Translated_448_residues
MKNILISDANHGGLTLLEEYSKYTKNNLFFYDTYNKLNLDMKEFYKKKYNVEFLSLDDIRKNEDKYITISPIHMKPLFRC
DYTHHEFTGYLIKKHEECYGWNFKIIEITGVKGKTTTANLIMEVLKNKNLLVLTSHNLLYKSCEREIVLDKTLSITPASI
IHALNRAKDMNLLSSIDYCIFEVSLGITTNTDIGILTNILEDYPIADNSQSASSAKKSVFKSKKVICDRTTLKKYYPHMD
KNIITVSLDDKTADIYTTEIDYNIKSTSIRIKYCDYEFRVNCFALCDFYINNILYAVCVGLLLDIPIKTITSNIKDTLPI
EGRGSIKYIEDKIVLEDINPGLNTTSISKCISNLERYSNNYVLIVGGDYGITCEEIDEEKLSKYISTIDSPIVLTGDVGY
NLLKKLDKDYEFYHELTDAFNYLLKKDYDVIQIIYRSEYARNITYLPN
>Mature_448_residues
MKNILISDANHGGLTLLEEYSKYTKNNLFFYDTYNKLNLDMKEFYKKKYNVEFLSLDDIRKNEDKYITISPIHMKPLFRC
DYTHHEFTGYLIKKHEECYGWNFKIIEITGVKGKTTTANLIMEVLKNKNLLVLTSHNLLYKSCEREIVLDKTLSITPASI
IHALNRAKDMNLLSSIDYCIFEVSLGITTNTDIGILTNILEDYPIADNSQSASSAKKSVFKSKKVICDRTTLKKYYPHMD
KNIITVSLDDKTADIYTTEIDYNIKSTSIRIKYCDYEFRVNCFALCDFYINNILYAVCVGLLLDIPIKTITSNIKDTLPI
EGRGSIKYIEDKIVLEDINPGLNTTSISKCISNLERYSNNYVLIVGGDYGITCEEIDEEKLSKYISTIDSPIVLTGDVGY
NLLKKLDKDYEFYHELTDAFNYLLKKDYDVIQIIYRSEYARNITYLPN

Specific function: Unknown

COG id: COG0770

COG function: function code M; UDP-N-acetylmuramyl pentapeptide synthase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013221 [H]

Pfam domain/function: PF08245 Mur_ligase_M [H]

EC number: NA

Molecular weight: Translated: 51763; Mature: 51763

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNILISDANHGGLTLLEEYSKYTKNNLFFYDTYNKLNLDMKEFYKKKYNVEFLSLDDIR
CCCEEEECCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHCCEEEEECCCCC
KNEDKYITISPIHMKPLFRCDYTHHEFTGYLIKKHEECYGWNFKIIEITGVKGKTTTANL
CCCCCEEEEEEEECCCEEEECCCCCHHHHHEEEECCHHCCCCEEEEEEECCCCCCHHHHH
IMEVLKNKNLLVLTSHNLLYKSCEREIVLDKTLSITPASIIHALNRAKDMNLLSSIDYCI
HHHHHCCCCEEEEECCCHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCEEE
FEVSLGITTNTDIGILTNILEDYPIADNSQSASSAKKSVFKSKKVICDRTTLKKYYPHMD
EEEEECEECCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHEECHHHHHHHCCCCC
KNIITVSLDDKTADIYTTEIDYNIKSTSIRIKYCDYEFRVNCFALCDFYINNILYAVCVG
CCEEEEEECCCCCEEEEEEEECEEEEEEEEEEEECEEECEEHHHHHHHHHHHHHHHHHHH
LLLDIPIKTITSNIKDTLPIEGRGSIKYIEDKIVLEDINPGLNTTSISKCISNLERYSNN
HHHHCCHHHHHCCCCCCCCCCCCCCEEEEECEEEEEECCCCCCHHHHHHHHHHHHHHCCC
YVLIVGGDYGITCEEIDEEKLSKYISTIDSPIVLTGDVGYNLLKKLDKDYEFYHELTDAF
EEEEEECCCCCCHHHCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHCHHHHHHHHHHHHH
NYLLKKDYDVIQIIYRSEYARNITYLPN
HHHHHCCCHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MKNILISDANHGGLTLLEEYSKYTKNNLFFYDTYNKLNLDMKEFYKKKYNVEFLSLDDIR
CCCEEEECCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHCCEEEEECCCCC
KNEDKYITISPIHMKPLFRCDYTHHEFTGYLIKKHEECYGWNFKIIEITGVKGKTTTANL
CCCCCEEEEEEEECCCEEEECCCCCHHHHHEEEECCHHCCCCEEEEEEECCCCCCHHHHH
IMEVLKNKNLLVLTSHNLLYKSCEREIVLDKTLSITPASIIHALNRAKDMNLLSSIDYCI
HHHHHCCCCEEEEECCCHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCEEE
FEVSLGITTNTDIGILTNILEDYPIADNSQSASSAKKSVFKSKKVICDRTTLKKYYPHMD
EEEEECEECCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHEECHHHHHHHCCCCC
KNIITVSLDDKTADIYTTEIDYNIKSTSIRIKYCDYEFRVNCFALCDFYINNILYAVCVG
CCEEEEEECCCCCEEEEEEEECEEEEEEEEEEEECEEECEEHHHHHHHHHHHHHHHHHHH
LLLDIPIKTITSNIKDTLPIEGRGSIKYIEDKIVLEDINPGLNTTSISKCISNLERYSNN
HHHHCCHHHHHCCCCCCCCCCCCCCEEEEECEEEEEECCCCCCHHHHHHHHHHHHHHCCC
YVLIVGGDYGITCEEIDEEKLSKYISTIDSPIVLTGDVGYNLLKKLDKDYEFYHELTDAF
EEEEEECCCCCCHHHCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHCHHHHHHHHHHHHH
NYLLKKDYDVIQIIYRSEYARNITYLPN
HHHHHCCCHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]